prot_Ecto-sp9_F_contig9065.17252.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9065.17252.1
Unique Nameprot_Ecto-sp9_F_contig9065.17252.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length478
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9065.17252.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYI2_9PHAE)

HSP 1 Score: 743 bits (1919), Expect = 8.970e-266
Identity = 418/478 (87.45%), Postives = 432/478 (90.38%), Query Frame = 0 
Query:    1 MYVHPSKSGNDGGRGVAPPGNFNPFASDQYIFQGYESPPRYFAPFGIAGNAPKSGSSSYDGELEDSDTPCVATLPSTFRLERTNLVVTAPSTERSLSVDSLLDALRAALADADVDVLDLKPAHCVLECSYHVGNRFLSLFVRVFKAPNRASGQLFDNSSMGNNNND-GDEQTPFLVEAQLREGDRLHFSALFREIMRTFMNQEGVNLAGTFRYKPRTYPATGEGLALEQVNMAPSRNSIRLLAERGEAIKTGGSPLPVPASMARPQASSSSSPELDSDMMDDVVLLADMLSGSYLDVQADAAAAVAGLTTDGKLVDQLSSGAAADAANALARAAARLLVETRHRPARRQAAVAVANLTKTPQLRAALLASDPXXXXXXFRGRAASADDLHAQQRRLVESLVVLSMGRDDGSAARKSEEEIGMRRECMRALVGLAESHVVRDMPAMRLLLSTDPSGRGAKDATLTKRLVECRGILRSRA 477
            MYVHPSKSGNDGG GVAPPGNF+PFASDQYIFQG E+ PR+FAPFGIAGNA  SG SSYDGELEDSDTPCVATLPSTFRLERTNLVVT+P  E+ LSVDSLLDALRAAL DA VDVLD KPAHCVLECSYHVGNRFLSLF+RVFKAP+RASGQLFDNSS+GNNNND G EQTP+LVEAQLREGDRLHFSALFREI+R FMNQEGVNL GTFRYKPRTYPATGEGLALEQVNMAPSRNSIRLLAERGEA KTGGS LPVPASMARPQ SSSS PELDSDMMDDVVLLADMLSGSYLDVQADAAAAVAGLTTD KL++QLS GAAA+AANA+A AAARLLVETRHRPARRQAAVAVANLTKTPQLRAALLASD XXXXXX                 LVESLVVLSMGR DGSAARKSEEEIGMRRECMRALVGLAES VVRDMPAMRLLLSTDPSGRGAKDATLTKRL ECR ILRS A
Sbjct:  117 MYVHPSKSGNDGGSGVAPPGNFDPFASDQYIFQGGETTPRFFAPFGIAGNAHSSGLSSYDGELEDSDTPCVATLPSTFRLERTNLVVTSPLMEQLLSVDSLLDALRAALTDAGVDVLDFKPAHCVLECSYHVGNRFLSLFIRVFKAPDRASGQLFDNSSVGNNNNDDGAEQTPYLVEAQLREGDRLHFSALFREILRAFMNQEGVNLVGTFRYKPRTYPATGEGLALEQVNMAPSRNSIRLLAERGEATKTGGS-LPVPASMARPQVSSSS-PELDSDMMDDVVLLADMLSGSYLDVQADAAAAVAGLTTDVKLLEQLSRGAAANAANAIAHAAARLLVETRHRPARRQAAVAVANLTKTPQLRAALLASDXXXXXXXXXXXXXXXXXXXXXXXXLVESLVVLSMGRVDGSAARKSEEEIGMRRECMRALVGLAESRVVRDMPAMRLLLSTDPSGRGAKDATLTKRLEECREILRSHA 592
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9065.17252.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized8.970e-26687.45protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9065contigEcto-sp9_F_contig9065:2080..5365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9065.17252.1mRNA_Ecto-sp9_F_contig9065.17252.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9065 446..5485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9065.17252.1 ID=prot_Ecto-sp9_F_contig9065.17252.1|Name=mRNA_Ecto-sp9_F_contig9065.17252.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=478bp
MYVHPSKSGNDGGRGVAPPGNFNPFASDQYIFQGYESPPRYFAPFGIAGN
APKSGSSSYDGELEDSDTPCVATLPSTFRLERTNLVVTAPSTERSLSVDS
LLDALRAALADADVDVLDLKPAHCVLECSYHVGNRFLSLFVRVFKAPNRA
SGQLFDNSSMGNNNNDGDEQTPFLVEAQLREGDRLHFSALFREIMRTFMN
QEGVNLAGTFRYKPRTYPATGEGLALEQVNMAPSRNSIRLLAERGEAIKT
GGSPLPVPASMARPQASSSSSPELDSDMMDDVVLLADMLSGSYLDVQADA
AAAVAGLTTDGKLVDQLSSGAAADAANALARAAARLLVETRHRPARRQAA
VAVANLTKTPQLRAALLASDPPAGGGGFRGRAASADDLHAQQRRLVESLV
VLSMGRDDGSAARKSEEEIGMRRECMRALVGLAESHVVRDMPAMRLLLST
DPSGRGAKDATLTKRLVECRGILRSRA*
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