prot_Ecto-sp9_F_contig905.17240.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig905.17240.1
Unique Name	prot_Ecto-sp9_F_contig905.17240.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	222

Homology

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BLAST of mRNA_Ecto-sp9_F_contig905.17240.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX3_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.300e-148
Identity = 214/221 (96.83%), Postives = 216/221 (97.74%), Query Frame = 0

Query:    1 MRQAGSAGRVPDPREVFQTRRGGAMDPHTRLPGYTCSTMLGVTQVWFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEAERRRAXXRECRRLVVGLAVSQRRSDPGTRRGKTSTHEQQRASGGPRSGMSRSSSRTWSLPPLTDAFHLKGGEEDQGFSSGGGGRAPCHGGAVAAPPVVRECRAVHLDEAAILKKVYEFL 221
            MRQAGSAGRVPDP EVFQTRRGGAMDPHTRLPGYTCSTMLGVTQVWFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEAERRRAXXRECRRLVVGLAVSQRRSDPGTRRGKTSTHEQQRASGG RSGMSRSSSRTWSLPPLT+A HLKGGEEDQGFSSGGGGRAPCHGGAVAAP VVRECRAVHLDEAAIL K+YEFL
Sbjct:    1 MRQAGSAGRVPDPSEVFQTRRGGAMDPHTRLPGYTCSTMLGVTQVWFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEAERRRAXXRECRRLVVGLAVSQRRSDPGTRRGKTSTHEQQRASGGSRSGMSRSSSRTWSLPPLTEAIHLKGGEEDQGFSSGGGGRAPCHGGAVAAPSVVRECRAVHLDEAAILNKIYEFL 221

[Close]

BLAST of mRNA_Ecto-sp9_F_contig905.17240.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH9_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 1.690e-117
Identity = 183/213 (85.92%), Postives = 183/213 (85.92%), Query Frame = 0

Query:   25 MDPHTRLPGYTCSTMLGVTQV---------------WFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEAERRRAXXRECRRLVVGLAVSQRRSDPGTRRGKTSTHEQQRASGGP-RSGMSRSSSRTWSLPPLTDAFHLKGGEEDQGFSSGGGGRAPCHGGAVAAPPVVRECRAVHLDEAAILKKVYEFL 221
            MDPHTRLPGYTCSTMLGVTQV               WFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKE      XX ECRRLVVGLAVSQRRSDPGTRRGKT THEQQRASGG  RSGMSRSSSRTWSLPPLTDA HLKGGEEDQG SSGGG RAPCHGGAVAAPP VRECRAVHLDEAAIL KVYEFL
Sbjct:    1 MDPHTRLPGYTCSTMLGVTQVIDGSHQATSDLAPDVWFTAHHVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAKEXXXXXXXXXECRRLVVGLAVSQRRSDPGTRRGKTFTHEQQRASGGSSRSGMSRSSSRTWSLPPLTDATHLKGGEEDQGVSSGGGWRAPCHGGAVAAPPAVRECRAVHLDEAAILNKVYEFL 213

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig905.17240.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig905.17240.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	1.300e-148	96.83	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.690e-117	85.92	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 211..221

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig905	contig	Ecto-sp9_F_contig905:12592..15115 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig905.17240.1	mRNA_Ecto-sp9_F_contig905.17240.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig905 12592..15115 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig905.17240.1 ID=prot_Ecto-sp9_F_contig905.17240.1|Name=mRNA_Ecto-sp9_F_contig905.17240.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=222bp
MRQAGSAGRVPDPREVFQTRRGGAMDPHTRLPGYTCSTMLGVTQVWFTAH
HVGHVLKTLRSGRLDDLHRRMKRNPHVLDARVCRAVIWWSILAEAMEAAK
EAERRRARRRECRRLVVGLAVSQRRSDPGTRRGKTSTHEQQRASGGPRSG
MSRSSSRTWSLPPLTDAFHLKGGEEDQGFSSGGGGRAPCHGGAVAAPPVV
RECRAVHLDEAAILKKVYEFL*