prot_Ecto-sp9_F_contig905.17238.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig905.17238.1
Unique Nameprot_Ecto-sp9_F_contig905.17238.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length598
Homology
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 850 bits (2195), Expect = 2.570e-306
Identity = 454/501 (90.62%), Postives = 462/501 (92.22%), Query Frame = 0
Query:   97 EAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPVAPGTTTPFGRDAGGGCQAGAPVAGPVQRRSGGGGDIAGCKKLVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDAGATVAATTEGQCVEDVVESGHAGPVLWLGRTKTKPLSPGPSHSTGGPHAHGENGEKHLEGGELGESLGEHDHFSACHRXXXXXXXXXXXHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVGSKACAKGAAALFVTEQQLATKAEAEVLPLSPLAEQQNSAATVSAVVSGADGGARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSPETTAICYACSVLSRMVSFVTGPFVRFFRGFWERRRQQREQTAEGGGDREAGERSEAAEGVVSFAPPALDSPAATPVPPSVVAA 597
            +AFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDP +PGTTTPFGRD GGGC+AGA VAG  QRRSGGG DI GC+K+VPAGAGAVGSMETRE KAAAGAVRSPK GDTLHMLAPPSDIG VGRGGARG FGTARIASSDAGAT AAT EGQCVEDVVESGHAGPVL LGRTKTKPLSPGP HS  GPHAHGENGEKHLE GELGESLG+HDHF ACHRXXXXXX     HLSQEMKV SSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHV SKACAKGAAAL VTEQQLATKA AEVLPLSPLAE QNSAA VS VVSGADG ARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWI GHPSCPYCKGDLNVIPQENNSS ETTAICYACSVLS MVSFVTGP VRFFRG WERRRQQREQTAEGGGDREAGE +EAAEGVVSFAPPAL+S AATPVPPSVVAA
Sbjct:   56 QAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGSPGTTTPFGRDPGGGCRAGALVAGQAQRRSGGG-DITGCRKVVPAGAGAVGSMETRESKAAAGAVRSPKIGDTLHMLAPPSDIGQVGRGGARGAFGTARIASSDAGATAAATAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPCHSADGPHAHGENGEKHLEVGELGESLGKHDHFLACHRXXXXXXRPFHQHLSQEMKVSSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALLVTEQQLATKAGAEVLPLSPLAEHQNSAAAVSVVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNVIPQENNSSSETTAICYACSVLSGMVSFVTGPLVRFFRGIWERRRQQREQTAEGGGDREAGEGNEAAEGVVSFAPPALESSAATPVPPSVVAA 555          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 775 bits (2002), Expect = 1.760e-278
Identity = 430/558 (77.06%), Postives = 434/558 (77.78%), Query Frame = 0
Query:   40 MVAVVSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPVAPGTTTPFGRDAGGGCQAGAPVAGPVQRRSGGGGDIAGCKKLVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDAGATVAATTEGQCVEDVVESGHAGPVLWLGRTKTKPLSPGPSHSTGGPHAHGENGEKHLEGGELGESLGEHDHFSACHRXXXXXXXXXXXHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVGSKACAKGAAALFVTEQQLATKAEAEVLPLSPLAEQQNSAATVSAVVSGADGGARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSPETTAICYACSVLSRMVSFVTGPFVRFFRGFWERRRQQREQTAEGGGDREAGERSEAAEGVVSFAPPALDSPAATPVPPSVVAA 597
            MVAVVSQGYLCAIFVSIPP                          DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDP APGTTTPFGRDA   CQAGA VAG  QRRSGGG DIAG +K+VPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDA A  AA  EGQCVEDVVESGHAGPVL LGRTKTKPLSPGPSHST GPHAHGENGEKHLEGGELGESLG+HDHFSACHR    XXXX   HLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR                                                                      ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSS ETTAICYACSVLSRMVSFV GPFVRFFRG WERRRQQREQTAEGGGDREAGE +EAAEGVV FAPPALDSPAATPVPPSVVAA
Sbjct:    1 MVAVVSQGYLCAIFVSIPP--------------------------DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGG-DIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR----------------------------------------------------------------------ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 461          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.450e-13
Identity = 50/123 (40.65%), Postives = 65/123 (52.85%), Query Frame = 0
Query:  415 VLPLSPLAEQ--QNSAATVSAVVSGA--DGGARANDE------------TVVRVSELPDVCAICLGQYATGEEVHVLPC--LHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSPETTAI 519
            V P+SP   Q   ++AA  +  VSG   D  AR  D             T V  SEL   C ICLG Y TGE +  LPC   H++H EC+++W+ GH +CPYCK DL ++  E   SP  TA+
Sbjct:   15 VTPVSPGEHQLHASAAARTAGGVSGRLHDAKARLGDSGTQDVELGVTTSTAVATSELQ--CVICLGDYTTGESLCRLPCPFQHVYHVECINLWLDGHSTCPYCKYDL-MLAAEEEQSPSATAM 134          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)

HSP 1 Score: 72.8 bits (177), Expect = 3.620e-12
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:  459 CAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDL 503
            C ICL +Y  GEE+ VLPCLH FHAEC+D W++ +PSCP C+ D+
Sbjct:   47 CRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754 RepID=A0A5E4F3R2_PRUDU)

HSP 1 Score: 73.9 bits (180), Expect = 7.510e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  444 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 508
            A+ + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   73 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 139          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754 RepID=A0A251NVP6_PRUPE)

HSP 1 Score: 73.9 bits (180), Expect = 7.880e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  444 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 508
            A+ + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   75 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 141          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (E3 ubiquitin transferase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQH7_PRUDU)

HSP 1 Score: 72.8 bits (177), Expect = 8.990e-12
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  447 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 508
            + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   46 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 109          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-H2 (finger protein ATL8-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE394)

HSP 1 Score: 74.7 bits (182), Expect = 1.050e-11
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  451 RVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNV 505
            RV +L D CAIC+ ++A GEEV VLP C HIFH EC+D W+R H SCP C+ +L V
Sbjct:  101 RVEKLAD-CAICMAEFAAGEEVRVLPQCRHIFHVECVDTWLRSHSSCPSCRENLVV 155          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: RING-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.520e-11
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  449 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNV 505
            V+R SEL   C++CL  Y   E V +LPC H++H EC+D+W+R H  CPYC+ D+NV
Sbjct:  312 VIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNV 368          
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UJN4_HEMAN)

HSP 1 Score: 70.9 bits (172), Expect = 4.470e-11
Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  441 GARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSP 514
            G R NDE      +   VC ICLG + TGEE  +LPCLH+FH  C+D W+R    CP CK   +V+   N  SP
Sbjct:   35 GERGNDEE----GDDDPVCTICLGNFCTGEECRMLPCLHVFHRACIDQWLRVSRDCPLCK--QSVMGGANAQSP 102          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig905.17238.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RING-type2.570e-30690.62domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
RING-type1.760e-27877.06domain-containing protein n=1 Tax=Ectocarpus silic... [more]
RING-type2.450e-1340.65domain-containing protein n=1 Tax=Tribonema minus ... [more]
RING-type3.620e-1260.00domain-containing protein n=1 Tax=Denticeps clupeo... [more]
RING-type7.510e-1243.28E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754... [more]
RING-type7.880e-1243.28E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754... [more]
RING-type8.990e-1243.75E3 ubiquitin transferase n=1 Tax=Prunus dulcis Tax... [more]
RING-H21.050e-1158.93finger protein ATL8-like n=1 Tax=Olea europaea var... [more]
RING-type1.520e-1150.88domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical4.470e-1145.95protein n=2 Tax=Hemiselmis andersenii TaxID=464988... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 459..499
e-value: 4.7E-6
score: 36.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 458..500
e-value: 2.3E-12
score: 47.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 459..500
score: 12.106
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 421..505
e-value: 2.7E-16
score: 61.0
NoneNo IPR availablePANTHERPTHR14155:SF202coord: 392..503
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 392..503
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..597
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 452..506
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig905contigEcto-sp9_F_contig905:918..4807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig905.17238.1mRNA_Ecto-sp9_F_contig905.17238.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig905 918..4807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig905.17238.1 ID=prot_Ecto-sp9_F_contig905.17238.1|Name=mRNA_Ecto-sp9_F_contig905.17238.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=598bp
LFGSGLIFSTGLVWFFVQAWIFAIEAQTVWLIILLTVTTMVAVVSQGYLC
AIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQINREAFA
SFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPVAPGTTTPF
GRDAGGGCQAGAPVAGPVQRRSGGGGDIAGCKKLVPAGAGAVGSMETREC
KAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDAGAT
VAATTEGQCVEDVVESGHAGPVLWLGRTKTKPLSPGPSHSTGGPHAHGEN
GEKHLEGGELGESLGEHDHFSACHRHRHRHRRHFHQHLSQEMKVCSSWTG
SAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVGSKACAKGAAAL
FVTEQQLATKAEAEVLPLSPLAEQQNSAATVSAVVSGADGGARANDETVV
RVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCK
GDLNVIPQENNSSPETTAICYACSVLSRMVSFVTGPFVRFFRGFWERRRQ
QREQTAEGGGDREAGERSEAAEGVVSFAPPALDSPAATPVPPSVVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD