prot_Ecto-sp9_F_contig9044.17236.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9044.17236.1
Unique Nameprot_Ecto-sp9_F_contig9044.17236.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length471
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9044.17236.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D9_ECTSI)

HSP 1 Score: 642 bits (1656), Expect = 6.270e-228
Identity = 346/473 (73.15%), Postives = 387/473 (81.82%), Query Frame = 0 
Query:    1 MAIWTTTSLSVGEANALITVVSMVVCYCMSLMFASVSLEIRRLMVILGKGDAIIQDEGYSSMWSLYRSSNARRWTALAVLPVLLSGAVSLLMDFTTAGVTASIGHTAGDEVHVMGLVGDEVTYEYKI---GRDDEEGVYVYGNKYGAPISVDITFCVEVDEIETDDAFAITECREGLIVDKSVKSFNVASVATAVSVVIDVDNNCTTLYDDIPLGNQGVGIVERDFTFNDTDGIEVAAAATCSSITESIIESCVWEDSGILYFGDWNILGAGSCDDTNNGDDALMSILAIDYGQRVEQGSNTAALLASMTAEIFAGTGLLTSRQQLVDVLGAIVRLESMAWKVQTAYDPVDVVEIGVSAWVPVVLLLALLLPVMAWGLVKWHVRSGKDLFLPVSPGEWSACAARELGEAGNEHGSGSLEMTKPLDEHFCQVYAFGPPVMGADEGSGGSQQQRLGWVNRSAVTQAPTGKRAPFR 470
            M +WTTTSLSVGEANALIT VSMVVCY MSLM ASVSLEIRR M++ GK DAIIQDE + SMW +++SS  RRWT LAVLPVLL GA S+++DFTT+GV+ASIGHT G EV V+GLVG +V +EYK+   G   E+GVYV+GNKY  P +VDITFCVEV EIE D AFAI+ECREGLIVDKSVKSF V SV T V  ++D+   C+ LY  IPLGNQGVGIVERDFTF DTDG EVAAAATCSSITESIIESCVWE  GILYFGDWNI GAG C +        MSILAIDYG+RVEQG++TAALLA+MTAEIFAGTGLLTSRQQLVDVLGAIVRLESMAW VQTAYDP++VVEIG+SAWVPVVLLLAL+LP MAWG VKWH+R GK  FLPVSP EWSACAAREL E G + GS S    KPLDEH+ +VYAFG  V+G DE   GSQQ RLGW+NR+AV QA TGK +PFR
Sbjct:    1 MVVWTTTSLSVGEANALITAVSMVVCYSMSLMLASVSLEIRRFMIVRGKQDAIIQDEDFKSMWDVFKSSKTRRWTTLAVLPVLLGGAASMVIDFTTSGVSASIGHTEGAEVPVLGLVGSDVRHEYKVNPVGTGSEQGVYVFGNKYDTPETVDITFCVEVSEIEGD-AFAISECREGLIVDKSVKSFYVKSVITGV--IVDLQE-CSVLYVSIPLGNQGVGIVERDFTFEDTDGTEVAAAATCSSITESIIESCVWESGGILYFGDWNIEGAGECGEVEF--PPFMSILAIDYGERVEQGNDTAALLAAMTAEIFAGTGLLTSRQQLVDVLGAIVRLESMAWDVQTAYDPLNVVEIGISAWVPVVLLLALVLPAMAWGFVKWHIR-GKYFFLPVSPAEWSACAARELSELGKD-GSRSSGTAKPLDEHYSKVYAFGS-VVGTDEEGEGSQQ-RLGWINRNAVAQAATGKLSPFR 463
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9044.17236.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized6.270e-22873.15protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..355
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..376
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..470
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..34
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 354..376
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9044contigEcto-sp9_F_contig9044:2164..3720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9044.17236.1mRNA_Ecto-sp9_F_contig9044.17236.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9044 2164..3720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9044.17236.1 ID=prot_Ecto-sp9_F_contig9044.17236.1|Name=mRNA_Ecto-sp9_F_contig9044.17236.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=471bp
MAIWTTTSLSVGEANALITVVSMVVCYCMSLMFASVSLEIRRLMVILGKG
DAIIQDEGYSSMWSLYRSSNARRWTALAVLPVLLSGAVSLLMDFTTAGVT
ASIGHTAGDEVHVMGLVGDEVTYEYKIGRDDEEGVYVYGNKYGAPISVDI
TFCVEVDEIETDDAFAITECREGLIVDKSVKSFNVASVATAVSVVIDVDN
NCTTLYDDIPLGNQGVGIVERDFTFNDTDGIEVAAAATCSSITESIIESC
VWEDSGILYFGDWNILGAGSCDDTNNGDDALMSILAIDYGQRVEQGSNTA
ALLASMTAEIFAGTGLLTSRQQLVDVLGAIVRLESMAWKVQTAYDPVDVV
EIGVSAWVPVVLLLALLLPVMAWGLVKWHVRSGKDLFLPVSPGEWSACAA
RELGEAGNEHGSGSLEMTKPLDEHFCQVYAFGPPVMGADEGSGGSQQQRL
GWVNRSAVTQAPTGKRAPFR*
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