prot_Ecto-sp9_F_contig9040.17233.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9040.17233.1
Unique Nameprot_Ecto-sp9_F_contig9040.17233.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length574
Homology
BLAST of mRNA_Ecto-sp9_F_contig9040.17233.1 vs.
Match: E3 (ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI)

HSP 1 Score: 640 bits (1652), Expect = 6.150e-209
Identity = 476/525 (90.67%), Postives = 480/525 (91.43%), Query Frame = 0
Query:   61 APRGLDAVAGVALDRLAESLETASSPPWAREQQKQRNIEKVSRLRLLHQMWSAAGYTAAAAEXXXXXXXXXXXXXXVDGRGSSHAGEAFRGNESLHLRRLLRVVEHGASLLDHNNDVDAAATPAVAASTAALAGEGEXXXXXXXXX----------GPVAGGNAGTVSAAEQQLQGAAAELPGDGDGRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLGRIFXXXXXXXXXXXXXXXXXXXXXXXXRGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPALKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGVAYKTSSWSERLSPESASALESVWESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXPGLSKGTAXXXXA-SALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEASDANNSSSASGGAVE 574
            AP GLDAVAGVALDRLAESLETASSPPWARE QKQRN EKVSRLRLLHQMWSAAGYTAAAAE    XXXXXXXXX VDG GSSHA EAFRGNESLHLRRLLRVVEHG SLLDHNNDVDAAATPAVAAST        XXXXXXXXX          GPVAGGNAG VSAA++QLQGAAA LPGDGDGRD +XXXXXXXXXXXXXXXXXXXXXXXXXXXXX KLGRI XXXXXXXXXXXXXXXXXXXXXXXX GQKKSSFVLSPEEATWIRRGLELPMQAMGNTQP LKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGG+A KTSSWSERLSPESASALESVWE DAVWPLMQTPLLSWDLTTLLVG VSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXX  PGLSKG  XXXX  SALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEASDANNSSSASGGAVE
Sbjct:  754 APPGLDAVAGVALDRLAESLETASSPPWAREHQKQRNTEKVSRLRLLHQMWSAAGYTAAAAEAASRXXXXXXXXXGVDGGGSSHAREAFRGNESLHLRRLLRVVEHGTSLLDHNNDVDAAATPAVAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVAGGNAGAVSAAQEQLQGAAAVLPGDGDGRDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGRIXXXXXXXXXXXXXXXXXXXXXXXXX-GQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGLASKTSSWSERLSPESASALESVWEPDAVWPLMQTPLLSWDLTTLLVGSVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXX--PGLSKGXXXXXXXXSALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEASDANNSSSASGGAVE 1275          
BLAST of mRNA_Ecto-sp9_F_contig9040.17233.1 vs.
Match: E3 (ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 565 bits (1457), Expect = 2.990e-177
Identity = 481/573 (83.94%), Postives = 492/573 (85.86%), Query Frame = 0
Query:    1 QFGSPRSGLGGALVAGVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGAPRGLDAVAGVALDRLAESLETASSPPWAREQQKQRNIEKVSRLRLLHQMWSAAGYTAAAAEXXXXXXXXXXXXXXVDGRGSSHAGEAFRGNESLHLRRLLRVVEHGASLLDHNNDVDAAATPAVAASTAALAGEGEXXXXXXXXXGPVAGGNAGTVSAAEQQLQGAAAELPGDGDGRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKLGRIFXXXXXXXXXXXXXXXXXXXXXXXXRGQKK--SSFVLSPEEATWIRRGLELPMQAMGNTQPALKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGVAYKTSSWSERLSPESASALESVWESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXPGLSKGTAXXXXASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEASDANNSSSASGG 571
            +FGSPRSGLGGALVAGVVR      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AP  LDAVAGVALDRLA+SLE ASSPPWA E QKQRNIEKVSRLRLLHQMWSAAGYTAAAA XXXXXXXXXXXXXXVD  GSSHAGEAFRGNESLHLRRLLRVVEHGASLLDHNN+VDAA                 XXXXXXXXX       AG VS A+QQLQGAAA LPGDGDGRD +XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXX       SSF+LSPEEATW+RR LELPMQAMGNTQP LKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGG   KTSSWSERLSPESASALESVWESDAVWPLMQ P+LSWDLTTL+VGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGG XXXXXXXXXXXXXXXXXXXXX      LSK   XX  ASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNE SDAN  S++ GG
Sbjct: 1582 KFGSPRSGLGGALVAGVVRHRAPPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--APPALDAVAGVALDRLAQSLERASSPPWAWEHQKQRNIEKVSRLRLLHQMWSAAGYTAAAAXXXXXXXXXXXXXXXVDAGGSSHAGEAFRGNESLHLRRLLRVVEHGASLLDHNNNVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----AGAVSEAQQQLQGAAAVLPGDGDGRDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFILSPEEATWMRRALELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAGGATSKTSSWSERLSPESASALESVWESDAVWPLMQIPILSWDLTTLVVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGSXXXXXXXXXXXXXXXXXXXXXR-----LSKXXXXX--ASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVASCSTDNSNEGSDANRGSTSGGG 2140          
BLAST of mRNA_Ecto-sp9_F_contig9040.17233.1 vs.
Match: E3 (ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.430e-11
Identity = 73/144 (50.69%), Postives = 85/144 (59.03%), Query Frame = 0
Query:  404 WPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXPGLSKGTAXXXXASALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLL 547
            WP++Q PLL+WDL+TL     ++  S   R    RAVCLARL Q  +QPE CL G      XXXXXXXXXXXXXXXXXXXXXXX              ALE  RG LAE  G  V+  AP G  L+    ++W PFLR + LLL
Sbjct: 1869 WPVLQVPLLAWDLSTLAAALATLVHSAEQRRAAVRAVCLARLAQLCVQPEFCLLGTVAATAXXXXXXXXXXXXXXXXXXXXXXXX------------XALEAQRGALAEEIGLAVAATAPRGAALLHAALAAWLPFLRYAVLLL 2000          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9040.17233.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
E36.150e-20990.67ubiquitin-protein ligase n=1 Tax=Ectocarpus silicu... [more]
E32.990e-17783.94ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CC... [more]
E35.430e-1150.69ubiquitin-protein ligase n=1 Tax=Tribonema minus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9040contigEcto-sp9_F_contig9040:192..5488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9040.17233.1mRNA_Ecto-sp9_F_contig9040.17233.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9040 192..5488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9040.17233.1 ID=prot_Ecto-sp9_F_contig9040.17233.1|Name=mRNA_Ecto-sp9_F_contig9040.17233.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=574bp
QFGSPRSGLGGALVAGVVRRRAPPVPPAPAAQQTQQQEEEEEKRGRGDEG
AATAGGGDGGAPRGLDAVAGVALDRLAESLETASSPPWAREQQKQRNIEK
VSRLRLLHQMWSAAGYTAAAAEAASRAEGAGGGGGGVDGRGSSHAGEAFR
GNESLHLRRLLRVVEHGASLLDHNNDVDAAATPAVAASTAALAGEGEAPA
AAAAAAGPVAGGNAGTVSAAEQQLQGAAAELPGDGDGRDAASSSSPTTTG
GSGGVIVAAAPPPVSGVVAAIKLGRIFGGAAVVPPPEGIRALGGGGGAGG
SRGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPALKEADKGRLESFRL
RQAYALKRPRQAARECFEEAAAGGVAYKTSSWSERLSPESASALESVWES
DAVWPLMQTPLLSWDLTTLLVGGVSMARSWSNRAGVARAVCLARLCQALL
QPELCLRGPGGAAAAAAAAAAAAAAAGGGRKSGGGRRPGLSKGTAAAAAA
SALELLRGVLAEATGTPVSRLAPVGKELVSMCYSSWAPFLRCSALLLVAS
CSTDNSNEASDANNSSSASGGAVE
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