prot_Ecto-sp9_F_contig904.17230.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig904.17230.1
Unique Nameprot_Ecto-sp9_F_contig904.17230.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length260
Homology
BLAST of mRNA_Ecto-sp9_F_contig904.17230.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7CUQ0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 6.690e-36
Identity = 76/134 (56.72%), Postives = 102/134 (76.12%), Query Frame = 0
Query:  122 METGVVTTSRRYNDLKLRADRKAIELQSLLDTLTMMKLEHDALEKMKMRQTPESDRIGTLNTAIEEATGEIQGKLQYRRLLNHMLQRLERNKVKFHAHLNSMEESLNATKREKIDVESLTRQLETGRTKATLEL 255
            METGV   +RRYNDLK+ ADRKA+EL+  LDTL  +K+E+DAL  MK ++TPES+RI  L   I++A  E + KL YRR L HML+RL++N++ F AH+N+MEE+L A +RE  DV++L RQLE G+TKA L+L
Sbjct:    1 METGVNLNARRYNDLKITADRKAVELKKRLDTLACLKMENDALSDMKAKKTPESNRIEELTDEIKKANQETENKLHYRRQLEHMLRRLQKNQITFDAHINAMEEALGAAEREHEDVKALMRQLEAGKTKAVLDL 134          
BLAST of mRNA_Ecto-sp9_F_contig904.17230.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YZU2_PHYSP)

HSP 1 Score: 96.7 bits (239), Expect = 4.940e-19
Identity = 76/252 (30.16%), Postives = 133/252 (52.78%), Query Frame = 0
Query:   21 RKCRKKGGAANRLNPL----TSSLGS--TVGNGTVSGAGIVPGASGRPRKTFHKRDLVEAVRKMGS----------LHASGSRVELGEGSTGSASKDKAGRIKRSNANNETKGQLRVMETGVVTTSRRYNDLKLRADRKAIELQSLLDTLTMMKLEHDALEKMKMRQTPESDRIGTLNTAIEEATGEIQGKLQYRRLLNHMLQRLERNKVKFHAHLNSMEESLNATKREKIDVESLTRQLETGRTKATLELQ 256
            R+ +K+GG + R+  L    TS+ G+     +   S  G     + + +K  HKR+LVEAVRK  +          L +S   +  G G +G    D + R             +  +E GV   +R++N+LKL A+R+  EL  LLD L +++LE+D L +++ + TP S +   +   I + T  ++ ++  RR L HM++RL+  +++  A L  M  ++++++RE  +V+ L RQLE G+++A   LQ
Sbjct:   19 RQPKKRGGLSGRMRLLPLADTSAQGAYEMFSSNNPSNGGKSGLVTQKLKKITHKRELVEAVRKATTPMMLPGRDSPLSSSVRGLHEGSGGSGGPETDSSQR------------DIECLEDGVHLNARKFNELKLMAERRQRELNGLLDELRVLQLENDTLSRIQNQDTPISKKNIQIKQQITQCTASMEEQMHLRRQLEHMIRRLQTTQLRVDAQLTGMAAAVDSSEREVEEVKMLCRQLEVGKSRAVQFLQ 258          
BLAST of mRNA_Ecto-sp9_F_contig904.17230.1 vs.
Match: Uncharacterized (protein AlNc14C194G8523 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ43_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.430e-11
Identity = 62/193 (32.12%), Postives = 102/193 (52.85%), Query Frame = 0
Query:   67 HKRDLVEAVRKMGSLHASGSRVELGEGSTGSASKD----KAGR-----IKRSNANNETKGQLRVMETGVVTTSRRYNDLKLRADRKAIELQSLLDTLTMMKLEHDALEKMKMRQTPESDRIGTLNTAIEEATGEIQGKLQYRRLLNHMLQRLERNKVKFHAHLNSMEESLNATKREKIDVESLTRQLETGRTK 250
            HKRDLVEAVRK+ +     SR +  +GS  SA K     K  R     +  SN     +  L  +   V+  +R+YN+LK+R+D K  EL +LLD L  ++LE   L++++ R+TP + +   +   I ++T     +    R    M++RL   +V   A L ++ E ++ + +E   V+ L+R LE+GR +
Sbjct:   60 HKRDLVEAVRKVNTPLVFPSRRQ--DGSNNSAMKVLSPMKTARKTPEALPESNTTISVQNDLSSLRNHVLLQARKYNELKMRSDMKERELCTLLDELQSIQLETHELKRIERRETPIAHQNAKMQQEIAQSTAISDEQTTLHRRYQQMIRRLIAEQVSGDAQLTAITERVHQSTQECNQVKELSRHLESGRNR 250          
BLAST of mRNA_Ecto-sp9_F_contig904.17230.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHU9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.260e-9
Identity = 57/197 (28.93%), Postives = 98/197 (49.75%), Query Frame = 0
Query:   67 HKRDLVEAVRKMGSLHASGSRVELGEGSTG-------SASKDKAGRIKRSNANNETKGQLRVMETGVVTTSRRYNDLKLRADRKAIELQSLLDTLTMMKLEHDALEKMKMRQTPESDRIGTLNTAIEEATGEIQGKLQYRRLLNHMLQRLERNKVKFHAHLNSMEESLNATKREKIDVESLTRQLETGRTKATLELQ 256
            HKRDLVEAVRK+ S     SR + G  +           ++        SN     +  L  +   V+  +R+YN+LK+ +D K  EL +LLD L  ++LE   L +++ R+TP + +   +   I ++T     ++   R    M++RL   +V   A L ++ E ++ + +E   V+ L+R LE+GR +    +Q
Sbjct:   60 HKRDLVEAVRKVNSPLVFPSRRQDGFHNNAIRVLSPVQTARKPPEASTESNTTISAQNDLISLRNHVLLQARKYNELKMLSDLKERELCTLLDELQSIQLETHELNRIERRETPIAQQNAKMQQEIAQSTAITDEQVVLHRRYQQMVRRLITEQVSADAQLTAITERVHQSTQECNQVKDLSRHLESGRNRTVQIVQ 256          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig904.17230.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Hypothetical6.690e-3656.72protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized4.940e-1930.16protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YZ... [more]
Uncharacterized2.430e-1132.12protein AlNc14C194G8523 n=1 Tax=Albugo laibachii N... [more]
Uncharacterized5.260e-928.93protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 206..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig904contigEcto-sp9_F_contig904:232..1517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig904.17230.1mRNA_Ecto-sp9_F_contig904.17230.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig904 232..1517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig904.17230.1 ID=prot_Ecto-sp9_F_contig904.17230.1|Name=mRNA_Ecto-sp9_F_contig904.17230.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=260bp
MADTLPYTVQQQSAQGSPGRRKCRKKGGAANRLNPLTSSLGSTVGNGTVS
GAGIVPGASGRPRKTFHKRDLVEAVRKMGSLHASGSRVELGEGSTGSASK
DKAGRIKRSNANNETKGQLRVMETGVVTTSRRYNDLKLRADRKAIELQSL
LDTLTMMKLEHDALEKMKMRQTPESDRIGTLNTAIEEATGEIQGKLQYRR
LLNHMLQRLERNKVKFHAHLNSMEESLNATKREKIDVESLTRQLETGRTK
ATLELQASR*
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