prot_Ecto-sp9_F_contig9030.17225.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9030.17225.1
Unique Nameprot_Ecto-sp9_F_contig9030.17225.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length132
Homology
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: PolyA_pol (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.550e-53
Identity = 93/113 (82.30%), Postives = 97/113 (85.84%), Query Frame = 0
Query:   23 WRFPFGISLFFRVG----MYREIRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERFC 131
            WR    + L   +G    +   +RDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIP GPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERFC
Sbjct:  607 WRVALVLGLTGDLGTKHILDSNVRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPRGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERFC 719          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: PolyA_pol (domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8F2_9ALVE)

HSP 1 Score: 90.1 bits (222), Expect = 2.070e-18
Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 0
Query:   36 GMYREIRDRGDKEEDAA--VIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKK-ILPEIPMGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 130
            G+ RE    G +    A  ++  +   A EI ++GLEGVWDLKP+ +GGE+KK +LP +P GP F  V+D++++WM+ +PEGTKE+   +++  +E+F
Sbjct:  652 GVQREESTGGGEGTSVASSILRHFCVGAEEIRALGLEGVWDLKPLLDGGELKKSVLPNLPKGPEFKIVLDEEMRWMLGHPEGTKEQCASHLRETFEKF 749          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V443_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.770e-17
Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 0
Query:   19 SSSYWR--FPFGIS--LFFRVGMYREIRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGP-VFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERFC 131
            S   WR     G+S  L  R G   E+ +    +    ++A Y ++A+ IE  GLEG WDLKPMFNG EV  ILP +   P V ++V + QIKWM+ +PEGT EE  E +KA+Y   C
Sbjct:  504 SGPLWRESLLLGLSADLSKRHGGLGEVFNSRHVKRHLRMLAVYEALAQTIEDYGLEGAWDLKPMFNGNEVIAILPGLKDHPRVIAEVQEVQIKWMLDHPEGTTEELAESLKAKYPTLC 621          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: tRNA (nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MDA3_9APIC)

HSP 1 Score: 77.8 bits (190), Expect = 4.310e-14
Identity = 33/91 (36.26%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   40 EIRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 130
            E  +R  +  D A +  ++++ ++IES+G+     L P+ +G +VK++L  +P GPVF +V+DDQ++W +ANP GT EE   Y+  +Y  +
Sbjct:  805 EAVERAQQPIDPADVERFVALKKQIESLGVATAHRLPPLCDGHKVKQLLKNLPKGPVFKEVLDDQVRWQLANPTGTAEECEAYLLTKYSAY 895          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWT3_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 1.440e-13
Identity = 31/74 (41.89%), Postives = 53/74 (71.62%), Query Frame = 0
Query:   57 YMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 130
            Y ++AREIE++GL GVWD+KP+ +G  +K+I   IP G  F+++MD Q +WM+ + EGT+E+ + ++   ++ F
Sbjct:  587 YEALAREIEALGLVGVWDMKPLVDGNAMKEIFRNIPKGKAFTELMDAQKEWMLEHQEGTREQLVTHLTQEFQDF 660          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: PolyA_pol (domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GMF9_VITBC)

HSP 1 Score: 73.2 bits (178), Expect = 1.780e-12
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 0
Query:   53 VIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGP----VFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERFC 131
            +++ Y ++   ++  GL GVW   P   G  VK +LP +P GP    +  +VMD Q+ WM+A+P+GT +E  E+IK+ + RFC
Sbjct:  509 LMSGYRAVEEAVDDFGLIGVWLRDPPLGGKAVKDVLPCLPTGPELNEIMKEVMDSQVVWMLAHPDGTADECSEFIKSEFGRFC 591          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3Q3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.260e-12
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   40 EIRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 130
            ++ D    EE    I  Y   A  ++ + L G+W+ KP+ +GG VKKILP +P GP F  VM++Q  WMI +P G+ E    +++  +  F
Sbjct:  690 DVVDERQSEERLGAIERYDIFATTLQRLSLIGIWNEKPLMDGGAVKKILPNLPKGPAFRDVMEEQQSWMITHPGGSLEALSTHLQNMFPDF 780          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIY1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.440e-12
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   40 EIRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKVMDDQIKWMIANP 112
            +I D   ++     +  Y S+   ++ +GL G+++ KP+ +GGEVKK+LP IP GP+F  VMD+Q+ WM   P
Sbjct:   27 DIVDESQEDLRQREVERYDSVGTAMQRIGLVGIYEQKPLMDGGEVKKVLPNIPKGPIFRDVMDEQVDWMTLPP 99          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EIC4_VITBC)

HSP 1 Score: 72.0 bits (175), Expect = 4.490e-12
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   23 WRFPFGISLFFRVGMYREIRDRGDKEEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGP----VFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERFC 131
            W+    +++   +G       R   E    +++ Y ++   I+  GL GVW   P   G  VK +LP +P GP    +   VMD Q+ WM+A+P+GT +E  E+IK    RFC
Sbjct:  503 WKASLAVAMAGAIG-------RTPLESAQHLMSGYRAVEEAIDEFGLIGVWKRDPPLGGKAVKDVLPCLPTGPELNEIMKHVMDAQVVWMLAHPDGTADECREFIKREVGRFC 608          
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XE22_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 1.120e-11
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   48 EEDAAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKVMDDQIKWMIANPEGTKEEGLEYIKARYERF 130
            E+D   I  Y      ++S+ +EG+WDLKP+ +G  V  +LP +P GP    VMD QI+W I NP G +++   ++   +  +
Sbjct:  178 EQDGIKIDVYERFMGLVDSLEMEGIWDLKPLLDGRRVLDLLPGLPKGPAIGYVMDRQIEWQIVNPSGGEDDCKRWLTHEFRSY 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9030.17225.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PolyA_pol1.550e-5382.30domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
PolyA_pol2.070e-1841.84domain-containing protein n=2 Tax=Chromera velia C... [more]
Hypothetical1.770e-1743.22protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
tRNA4.310e-1436.26nucleotidyltransferase/poly(A) polymerase family p... [more]
Hypothetical1.440e-1341.89protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
PolyA_pol1.780e-1238.55domain-containing protein n=1 Tax=Vitrella brassic... [more]
Hypothetical3.260e-1236.26protein n=1 Tax=Amphora coffeiformis TaxID=265554 ... [more]
Uncharacterized3.440e-1239.73protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
Uncharacterized4.490e-1232.74protein n=1 Tax=Vitrella brassicaformis (strain CC... [more]
Hypothetical1.120e-1134.94protein n=1 Tax=Compsopogon caeruleus TaxID=31354 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13734TRNA-NUCLEOTIDYLTRANSFERASEcoord: 21..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 20..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9030contigEcto-sp9_F_contig9030:1873..2797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9030.17225.1mRNA_Ecto-sp9_F_contig9030.17225.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9030 198..2839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9030.17225.1 ID=prot_Ecto-sp9_F_contig9030.17225.1|Name=mRNA_Ecto-sp9_F_contig9030.17225.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=132bp
MDAHACLNPVPMHKSTSLSSSYWRFPFGISLFFRVGMYREIRDRGDKEED
AAVIAAYMSMAREIESMGLEGVWDLKPMFNGGEVKKILPEIPMGPVFSKV
MDDQIKWMIANPEGTKEEGLEYIKARYERFC*
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