prot_Ecto-sp9_F_contig9029.17222.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9029.17222.1
Unique Nameprot_Ecto-sp9_F_contig9029.17222.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length252
Homology
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: Heat (shock protein, mitochondrial protein import, putative mitochondrial translocase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE4_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 5.620e-113
Identity = 211/219 (96.35%), Postives = 213/219 (97.26%), Query Frame = 0
Query:   33 GSSRPPQQQRECRARNGGRSSGSSGSSRGVLLQPTQRSSSSARSNTCRPLNAGFGQRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPEAEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMRSTGTPDEVTKGSAPDLTPEIVEKFDVAMGKDGVLTLSPKDGAVGEEGQEPPSS 251
            GSSRPPQQQRECRARNGGRSSGSS   RGVLL PTQRSSSSARSNTCRPLNAGFGQRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPEAEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYM+STGTPDEVTKG APDLTPEI EKFDVAMGKDGVLTLSPKDGAVGEEG+EPPSS
Sbjct:  448 GSSRPPQQQRECRARNGGRSSGSS---RGVLLHPTQRSSSSARSNTCRPLNAGFGQRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPEAEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMQSTGTPDEVTKGRAPDLTPEIAEKFDVAMGKDGVLTLSPKDGAVGEEGEEPPSS 663          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: DNL-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L228_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 8.620e-75
Identity = 158/184 (85.87%), Postives = 162/184 (88.04%), Query Frame = 0
Query:    1 MKTMVPVTLGATLLGLNLTGNHQVDSFVVVPVGSSRPPQQQRECRARNGGRSSGSSGSSRGVLLQPTQRSSSSARSNTCRPLNAGFGQRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPEAEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKL 184
            MKTMVPV+LGATLLGL+LTGN QVD FVVVPVGSSRP               SGSSGS RG LLQPTQRSS SARSNTCRPLNAGFGQ+D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VPEAEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKK+
Sbjct:    1 MKTMVPVSLGATLLGLHLTGNRQVDGFVVVPVGSSRPXXXXXXXXXXXXXXRSGSSGSGRGALLQPTQRSSCSARSNTCRPLNAGFGQQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VPEAEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKV 183          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: DNL-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA9_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.010e-17
Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 0
Query:  135 RQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMRSTGTP 203
            R++ + FTCN+C+G + + IN+ ++ +GIV+  CQ C  +HLIADNL KLDFP FG N+EE+M   GTP
Sbjct:   96 RKITLSFTCNVCDGHNTHQINRVSFMQGIVVLWCQHCNQKHLIADNLGKLDFPEFGRNLEEFMAKKGTP 164          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: DNL-type (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWU7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.340e-13
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0
Query:  129 AKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDF-------------PAFGN-NIEEYMRSTGTPDEVTKGSAPDLTPEIVEKFDVAMGKDGVLTLSPKDGAVG 242
            A  +  R+  M +TCN+CEG +   +++ A+ EGIV+  C+ C A+HL+ADNL KLDF             PA G   +++ + + G   E  K       PE+  K+D+ + +DG + L+PK+   G
Sbjct:  164 APSSPSRKFQMLYTCNICEGRNLIQVDRVAFTEGIVVARCKHCDAKHLVADNLSKLDFGGLVKKGKEGESNPAGGKVTLDDILAARG---EEAKYLDIKSNPELAAKYDLMVLEDGTVELAPKENESG 288          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: Mitochondrial (translocase complex subunit, putative n=1 Tax=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) TaxID=573826 RepID=B9WK22_CANDC)

HSP 1 Score: 66.6 bits (161), Expect = 8.760e-10
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  135 RQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMR 198
            ++L +QFTCN+C   S + I+K AY+ G V+  C SC +RHLIADNL  +++    N +EEY++
Sbjct:   75 KELLLQFTCNICNNRSSHNISKQAYDHGTVVVQCPSCKSRHLIADNLGFMEYNKKFN-LEEYLK 137          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: DNL-type (zinc finger protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7110)

HSP 1 Score: 63.2 bits (152), Expect = 1.220e-8
Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0
Query:  138 FMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMRSTGTPDEVTKGSAPDL 214
            F+ +TC +C   + +M +K AYEEGIVI TC+ C  +HLIADNL   +      NIEE +   G      K  + D+
Sbjct:   87 FLAYTCKVCNTRNSHMFSKKAYEEGIVIVTCEGCKNKHLIADNLGWFEHVGK-RNIEEILEERGEQARYVKTDSDDI 162          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: Dnl-type (zinc finger n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U207_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.710e-8
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0
Query:  126 AEGAKGTGQRQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDF 186
            +  A     R+  M +TCN+CEG +   +++ A+ EGIV+  C+ C A+HL+ADNL KLDF
Sbjct:  176 SSAAPSPPSRKFQMLYTCNICEGRNLIQVDRVAFTEGIVVARCKHCDAKHLVADNLSKLDF 236          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: DNL-type (domain-containing protein n=3 Tax=Candida albicans TaxID=5476 RepID=A0A1D8PQU2_CANAL)

HSP 1 Score: 62.0 bits (149), Expect = 3.650e-8
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  135 RQLFMQFTCNLCEGVSQYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMR 198
            ++L +QFTCN+C   S + I+K AY+ G V+  C SC +RHLI+DNL  +++    N + +Y++
Sbjct:   69 KELLLQFTCNICNNRSSHNISKQAYDHGTVVVQCPSCKSRHLISDNLGFMEYNKKFN-LADYLK 131          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: Ubiquinone (biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183I2N4_9BILA)

HSP 1 Score: 61.2 bits (147), Expect = 2.420e-7
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  132 TGQRQLFMQFTCNLCEGVSQ--YMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMRSTGTPDEVTKG 209
            + Q +L + +TC +C G  Q   + +K AYEEG+VI TC+SC   HLIADNL          NIEE +   G  +E+ KG
Sbjct:   63 SSQGRLSLSYTCKVC-GTRQGPKLFSKKAYEEGVVIVTCESCKNHHLIADNLGWFPQSKNSRNIEEILEKKG--EEIRKG 139          
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Match: Ubiquinone (biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Onchocerca TaxID=6281 RepID=A0A044SEV7_ONCVO)

HSP 1 Score: 60.5 bits (145), Expect = 5.530e-7
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  132 TGQRQLFMQFTCNLCEGVSQ--YMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMRSTGTPDEVTKG 209
            + Q +L + +TC +C G  Q   + +K AYEEGIVI TC++C   HLIADNL          NIEE +   G  +E+ KG
Sbjct:   26 SSQGRLSLSYTCKVC-GTRQGPKLFSKKAYEEGIVIVTCETCKNHHLIADNLGWFPQSKDSRNIEEILNKKG--EEIKKG 102          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9029.17222.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Heat5.620e-11396.35shock protein, mitochondrial protein import, putat... [more]
DNL-type8.620e-7585.87domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
DNL-type2.010e-1752.17domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
DNL-type6.340e-1333.59domain-containing protein n=1 Tax=Nannochloropsis ... [more]
Mitochondrial8.760e-1045.31translocase complex subunit, putative n=1 Tax=Cand... [more]
DNL-type1.220e-840.26zinc finger protein-like n=1 Tax=Mercenaria mercen... [more]
Dnl-type1.710e-844.26zinc finger n=1 Tax=Nannochloropsis gaditana TaxID... [more]
DNL-type3.650e-840.63domain-containing protein n=3 Tax=Candida albicans... [more]
Ubiquinone2.420e-742.50biosynthesis protein COQ4 homolog, mitochondrial n... [more]
Ubiquinone5.530e-742.50biosynthesis protein COQ4 homolog, mitochondrial n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007853Zinc finger, DNL-typePFAMPF05180zf-DNLcoord: 139..201
e-value: 7.0E-20
score: 70.7
IPR007853Zinc finger, DNL-typePROSITEPS51501ZF_DNLcoord: 132..231
score: 13.408
NoneNo IPR availablePANTHERPTHR20922:SF13DNL-TYPE ZINC FINGER PROTEINcoord: 60..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
IPR024158Mitochondrial import protein TIM15PANTHERPTHR20922UNCHARACTERIZEDcoord: 60..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9029contigEcto-sp9_F_contig9029:3213..5341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9029.17222.1mRNA_Ecto-sp9_F_contig9029.17222.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9029 2743..5435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9029.17222.1 ID=prot_Ecto-sp9_F_contig9029.17222.1|Name=mRNA_Ecto-sp9_F_contig9029.17222.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=252bp
MKTMVPVTLGATLLGLNLTGNHQVDSFVVVPVGSSRPPQQQRECRARNGG
RSSGSSGSSRGVLLQPTQRSSSSARSNTCRPLNAGFGQRDDSAAAAAAKS
SKKKGKGKKAAKQGGGAAGGGGVPEAEGAKGTGQRQLFMQFTCNLCEGVS
QYMINKNAYEEGIVICTCQSCGARHLIADNLKKLDFPAFGNNIEEYMRST
GTPDEVTKGSAPDLTPEIVEKFDVAMGKDGVLTLSPKDGAVGEEGQEPPS
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007853Znf_DNL-typ
IPR024158Mt_import_TIM15