prot_Ecto-sp9_F_contig9021.17218.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9021.17218.1
Unique Nameprot_Ecto-sp9_F_contig9021.17218.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length384
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9021.17218.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT68_9PHAE)

HSP 1 Score: 606 bits (1563), Expect = 4.940e-211
Identity = 346/384 (90.10%), Postives = 351/384 (91.41%), Query Frame = 0 
Query:    1 MSDWISISKIRLQNIPVPVKGRPDFFRVVFFDGTMEVRTKSKRANLDGSVQWTERLEVLADDTAIKLVATVQQRSFLGDWVTGPDFHFIGSSLPSKWRHTSELPSAHKFYAELSVDRQEDLPPSTSTYKSEAHFRGPSKLPSPISSFSSSGPGSVRKGSDSYSPSSVAATSKTLLSSAVGXXXXXXXTRRGASLEGCSGSSAVSASRPARATHETRPRYSYPLRQEGGLWGVVGSTGMVLRSRPGLAMSQSFSWSPPASPIARPKDAPAFQQRAGASEAAGESSPPSSSCXXXXXXXXXXXXXXXXXERKWVTAGAAATGSGATLAPILPGPARSGSYSRPLAEPPAALADDLTAVQQFREAGGISPGNNSATTLDIVDGQRKL 384
            MSDWISISKIRLQNIPVPV+GRPDFFRVVFFDGTMEVRTKSKRANLDG VQWTERLEVLADDTAIKLVATVQQRSFLGDWV GPDFHF GSSLPSKWRHTSELPSAHKFYAELSVD QE LPPSTS+ KSEAHFRGPSKLPSP S+FS SG GSVRKGSDS SPSSVAATSKTLLSSAVG       TRRGASLEG S SSAVSAS P+RATHETRPRYSYPLRQEGGLWGVVGSTGMVLRSRP LAMSQSFSWSPPASPIARPKDA AFQQR GASEAAGESSPPSSSCXXXXXXXXXXXXXXX  ERKWVTAGAAATGSGATLAPILPGPARSGS SR   EPP ALAD+LTAVQQFREA GISPGN  ATTLDIVDGQRKL
Sbjct:    1 MSDWISISKIRLQNIPVPVEGRPDFFRVVFFDGTMEVRTKSKRANLDGLVQWTERLEVLADDTAIKLVATVQQRSFLGDWVAGPDFHFSGSSLPSKWRHTSELPSAHKFYAELSVDCQEYLPPSTSSDKSEAHFRGPSKLPSP-SAFSFSGLGSVRKGSDSSSPSSVAATSKTLLSSAVGGGFFGDGTRRGASLEGFSASSAVSASWPSRATHETRPRYSYPLRQEGGLWGVVGSTGMVLRSRPLLAMSQSFSWSPPASPIARPKDASAFQQRVGASEAAGESSPPSSSCXXXXXXXXXXXXXXXAPERKWVTAGAAATGSGATLAPILPGPARSGSSSRRRVEPPVALADNLTAVQQFREADGISPGNKFATTLDIVDGQRKL 383
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9021.17218.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized4.940e-21190.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9021contigEcto-sp9_F_contig9021:1945..5196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9021.17218.1mRNA_Ecto-sp9_F_contig9021.17218.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9021 1945..5196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9021.17218.1 ID=prot_Ecto-sp9_F_contig9021.17218.1|Name=mRNA_Ecto-sp9_F_contig9021.17218.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=384bp
MSDWISISKIRLQNIPVPVKGRPDFFRVVFFDGTMEVRTKSKRANLDGSV
QWTERLEVLADDTAIKLVATVQQRSFLGDWVTGPDFHFIGSSLPSKWRHT
SELPSAHKFYAELSVDRQEDLPPSTSTYKSEAHFRGPSKLPSPISSFSSS
GPGSVRKGSDSYSPSSVAATSKTLLSSAVGGGFFGGGTRRGASLEGCSGS
SAVSASRPARATHETRPRYSYPLRQEGGLWGVVGSTGMVLRSRPGLAMSQ
SFSWSPPASPIARPKDAPAFQQRAGASEAAGESSPPSSSCFSWSPLVSPL
ALPDEAPERKWVTAGAAATGSGATLAPILPGPARSGSYSRPLAEPPAALA
DDLTAVQQFREAGGISPGNNSATTLDIVDGQRKL
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