prot_Ecto-sp9_F_contig9013.17209.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9013.17209.1
Unique Nameprot_Ecto-sp9_F_contig9013.17209.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length369
Homology
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Poly(A) (ribonuclease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT67_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 1.080e-129
Identity = 291/368 (79.08%), Postives = 294/368 (79.89%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEVSGHAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKGGSHAANGHGHHGGVLSRGGQGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVVHGGVVPRHPGXXXXXXXXXXXXXXXXXXXXXXXPQXXXPXXXXXXXXGMVMMGPPMVGHXXXGPPQPPPY 368
            MVDLGSLILALACRHPVT ASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRD+RS+LVVSFADVKRCLEEAFAEVSGH G                                                   S GG+ GS   XXXXX  XXXXXXXXXXXXX   XXXXXXXX       VHVVHGGVVP    XXXXXXXXXXXXXXXXXXXXXXXPQXXXPXXXXXXXXGMVMMGPPMVGHXXXGPPQPPPY
Sbjct:  366 MVDLGSLILALACRHPVTVASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDRRSLLVVSFADVKRCLEEAFAEVSGHGG---------------------------------------------------SGGGRSGSNGGXXXXXAMXXXXXXXXXXXXXLVHXXXXXXXX-------VHVVHGGVVPHX--XXXXXXXXXXXXXXXXXXXXXXXPQXXXPXXXXXXXXGMVMMGPPMVGHXXXGPPQPPPY 673          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Pan3_PK (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ2_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 2.300e-119
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAE 188
            MVDLGSLILALACRHPVTAASRGESLAF AQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQ HLASEYDNGRLLRLLLKLGT+NERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRS+LVVSFADVKRCLEEAFAE
Sbjct:  385 MVDLGSLILALACRHPVTAASRGESLAFMAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTVNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAE 572          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6Q0_9STRA)

HSP 1 Score: 197 bits (500), Expect = 5.930e-56
Identity = 100/193 (51.81%), Postives = 139/193 (72.02%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLA----FTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV 189
            MV LG +IL+LA R  +T ++  E+L     F AQHY+ +LH L ++L+SK PPSV+EVC   A+HTMD ++N      A    LA+EY++GR LRLLLKLG +NERP+ G   +W+ETG+ Y+LKLFRD++FHQ D  G P++D GHV  +L+ LDA + EKI+L SRD ++ILVVS+A+V  CLE A++E+
Sbjct:  172 MVCLGRIILSLATRTMITPSTNEETLRACGIFLAQHYSSDLHALTSALLSK-PPSVYEVCGIMANHTMDELDNAYATCDAYSNQLAAEYESGRALRLLLKLGFVNERPEFGVNRQWAETGDCYVLKLFRDFVFHQADETGRPILDLGHVVTALNKLDASDTEKIVLASRDGKAILVVSYAEVANCLENAYSEL 363          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0I1_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.250e-52
Identity = 83/189 (43.92%), Postives = 132/189 (69.84%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV 189
            ++ LG  I+ +ACR   +  +  + +   AQH++ ++HN+  +L++K P S+F+VC A A H  + +        AL+ HL +E +NGRLL+LL+KLGT+NERP+      W++TG+RY+LKLFRDYLFHQ D +G+PV+D GH+  +L+ +DAG+ E+++LTS D++S+ V SF D++RC + AF E+
Sbjct:   18 IIALGHTIIGVACRAYASQQNLQQCIMTVAQHFSADMHNVLFNLITK-PTSIFDVCTAIAPHAFEELNMMYGVADALEVHLGNEVENGRLLKLLIKLGTINERPEHQMNPNWADTGDRYVLKLFRDYLFHQTDDNGDPVVDIGHIVNALNKVDAGDTEQVILTSPDQQSVFVASFEDIRRCADSAFHEL 205          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBK0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.430e-50
Identity = 92/193 (47.67%), Postives = 136/193 (70.47%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV-SGH 192
            +V LG  +L +A R  VT  +  +++   AQ Y+P +  L  SL++K PPSV E+C   A  + D + +       ++ HLA+E+ NGR+L+LL+ LG++NERP+      WSETG+RY+LKLFR+YLFHQVD +G+P +DFGH+  SL+ LDAG+ EKILL S D+R+ILVVSF ++K+C++ AFA++ +GH
Sbjct:  185 IVSLGMTLLTVASRAIVTPQTINQAMIAIAQQYSPVMQTLLISLITK-PPSVAELCGVLASQSFDELGSVYAVADGIEHHLANEFQNGRILKLLVMLGSINERPEYRMDPRWSETGDRYMLKLFRNYLFHQVDEEGQPKVDFGHIIHSLNKLDAGDPEKILLASPDQRAILVVSFTELKQCMDRAFADLYAGH 376          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA35_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.790e-49
Identity = 92/193 (47.67%), Postives = 136/193 (70.47%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV-SGH 192
            +V LG  +L +A R  VT  +  +++   AQ Y+P +  L  SL++K PPSV E+C   A  + D + +       ++ HLA+E+ NGR+L+LL+ LG++NERP+      WSETG+RY+LKLFR+YLFHQVD +G+P +DFGH+  SL+ LDAG+ EKILL S D+R+ILVVSF ++K+C++ AFA++ +GH
Sbjct:  396 IVSLGMTLLTVASRAIVTPQTINQAMIAIAQQYSPVMQTLLISLITK-PPSVAELCGVLASQSFDELGSVYAVADGIEHHLANEFQNGRILKLLVMLGSINERPEYRMDPRWSETGDRYMLKLFRNYLFHQVDEEGQPKVDFGHIIHSLNKLDAGDPEKILLASPDQRAILVVSFTELKQCMDRAFADLYAGH 587          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWX0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.500e-48
Identity = 76/159 (47.80%), Postives = 117/159 (73.58%), Query Frame = 0
Query:   31 QHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV 189
            QHY+ +LHN+  SL++K PP +F++C   A    D ++       AL+ HL +E +NGRLL+L++KLG +NERP+      W+ETG+RY+LKLFRDYLFHQVD +GE V+D GH+   L+ +D+ ++EK++L++ D+ S+LV SF+DV+RC++E+F E+
Sbjct:    8 QHYSQDLHNILLSLITK-PPDIFQLCATIAPKAFDELDMMYGVADALESHLTNEAENGRLLKLMIKLGCINERPEYQMNPHWAETGDRYVLKLFRDYLFHQVDENGEAVVDAGHIVNGLNKVDSNHDEKVVLSAPDQSSVLVASFSDVRRCVDESFHEL 165          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3K7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.090e-47
Identity = 84/190 (44.21%), Postives = 129/190 (67.89%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASR-GESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV 189
            + ++G ++L++ CRH +T A+   + L   AQ Y+  L  +  SLV  +  +V  + +A   HTM+ ++N L     L+  LA EY NGR+L L+LKLG +NERP+      WSETG+RY+LKLFRDY+FHQVD +  PV+DFGH+  +L+ LD  + EKILL+SRD  S+LV S+A+V +C++++F+++
Sbjct:  317 IANVGKVVLSIGCRHDITPATNISDLLGQFAQSYSANLFEIVKSLVQNECTTVQSLGIAVHDHTMNELDNQLSLTDELESQLACEYQNGRMLLLMLKLGLINERPEFNMDSSWSETGDRYLLKLFRDYVFHQVDEENRPVLDFGHIIDALNKLDGSSAEKILLSSRDGNSVLVASYAEVHKCVKQSFSDL 506          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: PAN2-PAN3 (deadenylation complex subunit PAN3 n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9N824_SAICN)

HSP 1 Score: 175 bits (443), Expect = 5.160e-46
Identity = 83/192 (43.23%), Postives = 129/192 (67.19%), Query Frame = 0
Query:    1 MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPS--VFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEVS 190
            ++ LG LI+++AC  P+ A     ++ F ++HY+ EL ++   L+SK  P+  + E+    A HT+    + L  N  ++  LA E +NGR+ RLL KLG +NERP+     +WSETG+RY++KLFRDY+FHQVD  G PV+D  HV   L+ LD G++EK++L SRD++S LV+S+ ++K C+E AF+++S
Sbjct:  382 LLQLGRLIVSIACGSPLAANDFPSAVDFISRHYSVELKDIIVYLISKPSPTKTISEIVTLIADHTIQDFNSALHFNDNIEAALARELENGRIARLLTKLGFINERPEYDHDPQWSETGDRYLIKLFRDYVFHQVDEQGNPVVDMAHVLSCLNKLDVGSDEKVMLVSRDEQSCLVLSYREIKSCIEVAFSQLS 573          
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Match: PAB-dependent (poly(A)-specific ribonuclease subunit 3 (Fragment) n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0YC16_TRIPS)

HSP 1 Score: 167 bits (423), Expect = 9.940e-46
Identity = 86/192 (44.79%), Postives = 126/192 (65.62%), Query Frame = 0
Query:    1 MVDLGSLILALACRH--PVTAASRGESLAFTAQHYTPELHNLAASLV-SKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEV 189
            +V LG LI +LAC +   +  A+   S+ F ++HY+ +L NL   L+  ++  +V E+           +++ LM    L+  L  E +NGRL R+L KL T+NERP  G   +WSETG+RY+LKLFRDY+FHQV  DG P +D GH+ Q L+ LDAG  EKI+L SRD++++L+VSFAD+ RCL+++F E+
Sbjct:   86 LVGLGQLIFSLACGNLSHLQQANFASSMEFLSRHYSTDLKNLILYLLHGQRSKNVMEIMPMIGARFFSHLDSWLMRVDMLENELIKEMENGRLFRILCKLATVNERPVLGMDPQWSETGDRYLLKLFRDYVFHQVTEDGSPWLDLGHIVQCLNKLDAGVAEKIMLMSRDEQNVLIVSFADLHRCLDQSFTEI 277          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9013.17209.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Poly(A)1.080e-12979.08ribonuclease subunit n=1 Tax=Ectocarpus siliculosu... [more]
Pan3_PK2.300e-11997.87domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical5.930e-5651.81protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
Hypothetical3.250e-5243.92protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.430e-5047.67protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical3.790e-4947.67protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical1.500e-4847.80protein (Fragment) n=1 Tax=Florenciella parvula Ta... [more]
Protein2.090e-4744.21kinase domain-containing protein (Fragment) n=1 Ta... [more]
PAN2-PAN35.160e-4643.23deadenylation complex subunit PAN3 n=2 Tax=Saitoel... [more]
PAB-dependent9.940e-4644.79poly(A)-specific ribonuclease subunit 3 (Fragment)... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041332Pan3 pseudokinase domainPFAMPF18101Pan3_PKcoord: 54..188
e-value: 1.3E-50
score: 171.0
IPR030844PAN2-PAN3 deadenylation complex subunit PAN3PANTHERPTHR12272FAMILY NOT NAMEDcoord: 1..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..368
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9013contigEcto-sp9_F_contig9013:509..3466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9013.17209.1mRNA_Ecto-sp9_F_contig9013.17209.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9013 482..3466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9013.17209.1 ID=prot_Ecto-sp9_F_contig9013.17209.1|Name=mRNA_Ecto-sp9_F_contig9013.17209.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=369bp
MVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPP
SVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTL
NERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLS
LLDAGNEEKILLTSRDKRSILVVSFADVKRCLEEAFAEVSGHAGPPPQQR
QQQQQQQQQHAASAPSSSVGGGGGGGGNKGGSHAANGHGHHGGVLSRGGQ
GGSGAGGSGSNGGGRGGMAMGIGGVHGGGHAGGLVHGGGVHGGGVHVVHG
GVVPRHPGGGGGGGGGGGGVVVPMGHHPHHHPQHHHPHHPQHHHPGMVMM
GPPMVGHHPGGPPQPPPY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041332Pan3_PK
IPR030844PAN3