prot_Ecto-sp9_F_contig900.17195.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig900.17195.1
Unique Nameprot_Ecto-sp9_F_contig900.17195.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length306
Homology
BLAST of mRNA_Ecto-sp9_F_contig900.17195.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY0_ECTSI)

HSP 1 Score: 620 bits (1600), Expect = 2.980e-223
Identity = 296/305 (97.05%), Postives = 301/305 (98.69%), Query Frame = 0
Query:    1 RRLGGCVPRGPCCMMPGHPPGSCPSEGLTCPAVLGCTAHKMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYQGSVKLCMNKDQDVGGEASCAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLPWLEPTADFFPAPRHRHRQLSSSEDAKEGAASGPQRQNTGAKHEEGIKHITPELRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMPDECRLYQPFEKQ 305
            RRLGGCVPRGPCCMMPGHPPGSCPSEGL CPAVLGCTAH MDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAY+GSVKLCMNKDQDVGGEA+CAEDLESVIKGACNLNFVTMCEAWASSVLLLFETL WLEPTADFFPAPRHRHRQLSSSEDAKEGAA+GPQR NTG+KHEEGIKHITPELRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMPDECRLYQPF+KQ
Sbjct:   95 RRLGGCVPRGPCCMMPGHPPGSCPSEGLMCPAVLGCTAHMMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYEGSVKLCMNKDQDVGGEAACAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLRWLEPTADFFPAPRHRHRQLSSSEDAKEGAAAGPQRHNTGSKHEEGIKHITPELRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMPDECRLYQPFDKQ 399          
BLAST of mRNA_Ecto-sp9_F_contig900.17195.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL5_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 2.040e-205
Identity = 288/361 (79.78%), Postives = 293/361 (81.16%), Query Frame = 0
Query:    1 RRLGGCVPRGPCCMMPGHPPGSCPSEGLTCPAVLGCTAHKMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYQGSVKLCMNKDQDVGGEASCAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLPWLEPTADFFPAPRHRHRQLS----------SSEDAKEGAASGPQRQNTGAKHEEGIKHITPELRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERR----------------------------------------------CNDETWAKDTLERFAPIMPDECRLYQPFEKQ 305
            RRLGGCVPRGPCCMMPGHPPGSCPSEGL CPAVLGCTAHKMDPKRNTMLEDPSVFSMSN+RDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAY  S+KLCMNKDQDVGGEA+CAEDLESV+KGACNLNFVTMCEAW SSVLLLFETLPWLEPTADFFPAPRHRH Q            SSEDAKE AASGPQRQNTGAKHEEG+KHITPELRDAARSANAVDEALHE VSAKFCERLRE GLLHHPLV AELATYEPLE R                                              CNDETWAKDTLERFAPIMPDECRLYQPFEKQ
Sbjct:   69 RRLGGCVPRGPCCMMPGHPPGSCPSEGLMCPAVLGCTAHKMDPKRNTMLEDPSVFSMSNIRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYDSSIKLCMNKDQDVGGEAACAEDLESVMKGACNLNFVTMCEAWGSSVLLLFETLPWLEPTADFFPAPRHRHHQCGCDLGRVTPVYSSEDAKESAASGPQRQNTGAKHEEGMKHITPELRDAARSANAVDEALHELVSAKFCERLREAGLLHHPLVVAELATYEPLEHRYAIGFVLCQAFGWGEADLRVWPCMIRCSRSETPSFFALPLSVSVPRCNDETWAKDTLERFAPIMPDECRLYQPFEKQ 429          
BLAST of mRNA_Ecto-sp9_F_contig900.17195.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L244_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 4.410e-178
Identity = 239/310 (77.10%), Postives = 263/310 (84.84%), Query Frame = 0
Query:    1 RRLGGCVPRGPCCMMPGHPPGSCPSEGLTCPAVLGCTAHKMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYQGSVKLCMNKDQDVGGEASCAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLPWLEPTADFFPAPRHRHRQLSSSEDA------KEGAASGPQRQNTGAKHEEGIKHITPELRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMPDECRLYQPFEK 304
            RRLGGCVPRGPCC  PG PPGSCP EGL CP V GCT+H+MDP    MLEDPSVFSM+N+R VVDRMVSGF YT PHSP C   DDVDYE+CF++M+ T KFQN+AARMVSGHDAY+G ++LCM+KDQD GGE  C EDLESVI+GACNLNFVTMCE W SSVLLLFETLPWL PTADFFPAP+ +HRQL S  DA      +  AASG  RQNTGAKHEEGIKHITPELR+AA SANAVDEALHEF+SAKFCERLRETGLLHHPLV A+LATYEPL+ RCNDETWAK+TLERFAPI P ECRLY+PF+K
Sbjct:   76 RRLGGCVPRGPCCRFPGDPPGSCPLEGLMCPMVTGCTSHRMDPTTTAMLEDPSVFSMANIRGVVDRMVSGFFYTDPHSPPCAWKDDVDYEACFQKMITTRKFQNIAARMVSGHDAYKGGIRLCMDKDQDEGGEGVCVEDLESVIRGACNLNFVTMCETWDSSVLLLFETLPWLGPTADFFPAPKRQHRQLPSIGDADAPAPLEVPAASGRSRQNTGAKHEEGIKHITPELREAASSANAVDEALHEFISAKFCERLRETGLLHHPLVSAQLATYEPLDHRCNDETWAKETLERFAPITPQECRLYEPFDK 385          
BLAST of mRNA_Ecto-sp9_F_contig900.17195.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X3_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 2.690e-38
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    1 RRLGGCVPRGPCCMMPGHPPGSCPSEGLTCPAVLGCTAHKMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDV 87
            RRLGGCVPRGPCC  PG PPGSCP EGL CP V GC  H M+ +R  MLEDPSVFSM+N+R VV+RMVSGFLYT+ HSP C RTD+V
Sbjct:   18 RRLGGCVPRGPCCAFPGDPPGSCPLEGLMCPMVTGCVGHNMNQRRTMMLEDPSVFSMTNIRGVVNRMVSGFLYTKSHSPPCARTDNV 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig900.17195.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized2.980e-22397.05protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.040e-20579.78protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.410e-17877.10protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Uncharacterized2.690e-3872.41protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig900contigEcto-sp9_F_contig900:25264..29140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig900.17195.1mRNA_Ecto-sp9_F_contig900.17195.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig900 25264..29140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig900.17195.1 ID=prot_Ecto-sp9_F_contig900.17195.1|Name=mRNA_Ecto-sp9_F_contig900.17195.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=306bp
RRLGGCVPRGPCCMMPGHPPGSCPSEGLTCPAVLGCTAHKMDPKRNTMLE
DPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTT
KFQNVAARMVSGHDAYQGSVKLCMNKDQDVGGEASCAEDLESVIKGACNL
NFVTMCEAWASSVLLLFETLPWLEPTADFFPAPRHRHRQLSSSEDAKEGA
ASGPQRQNTGAKHEEGIKHITPELRDAARSANAVDEALHEFVSAKFCERL
RETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMPDECRLYQ
PFEKQ*
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