prot_Ecto-sp9_F_contig90.17193.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig90.17193.1
Unique Nameprot_Ecto-sp9_F_contig90.17193.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length223
Homology
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI5_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 9.280e-103
Identity = 199/217 (91.71%), Postives = 205/217 (94.47%), Query Frame = 0
Query:    1 MFFSRRTALLVVVAATALLASDHVSLAATTTDQDTTGTTVTATSMEPTGTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTVDEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGGEYNCIDPEAVCVEDDDGDGGELTTAELEDDGITDEMADDARTADDDTSASGTTSFSSIVTGVATAAGAASVFAAF 217
            MFFSRRTAL VVVAATALLA DHVSLAATTTDQDTTGTTVTATSMEP     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TST++EDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGG+YNCIDPEAVCVEDDD DGGE+TTAELEDDGITDEMADDARTADDDTSASGTTSFSSIVTG+ATAAGAA VFAA+
Sbjct:    1 MFFSRRTALSVVVAATALLAPDHVSLAATTTDQDTTGTTVTATSMEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTTSTLEEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGGDYNCIDPEAVCVEDDDEDGGEMTTAELEDDGITDEMADDARTADDDTSASGTTSFSSIVTGIATAAGAAYVFAAY 217          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.990e-13
Identity = 35/58 (60.34%), Postives = 37/58 (63.79%), Query Frame = 0
Query:  103 DFSFAGDGKCHEDLNTEVCGYDGGDCCSCTC-EPGAFNCG-GEYNCIDPEAVCVEDDD 158
            D S  GDG C  D+N   CGYDGGDCC CTC   G + CG G Y CIDP A CV DDD
Sbjct:   43 DESAVGDGNCDRDINFAECGYDGGDCCECTCVAEGEYECGAGGYACIDPAAECVNDDD 100          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.340e-12
Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   89 VDEDDEPGGSYEDCDFSFA-GDGKCHEDLNTEVCGYDGGDCCSCTCEPGA---------FNCGGEYNCIDPEAVCVEDDD 158
            VD+DD     +E+CD++ + GDG C E  N E CGYDGGDCC CTCE  +         ++C  E++CIDP A CV DDD
Sbjct:   80 VDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCR-EFSCIDPNAACVSDDD 158          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.450e-11
Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   91 EDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCE---PGAFNCGGEYNCIDPEAVCVEDDD 158
            +DD   G +EDC F+F GDG C++  N E CGYDGGDCC CTC       F C  E+ CIDP A CV+DDD
Sbjct:   48 DDDVTEGMFEDC-FNF-GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCT-EFACIDPTAPCVDDDD 115          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.650e-11
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   89 VDEDDEPGGSYEDCDFSFA-GDGKCHEDLNTEVCGYDGGDCCSCTC-EPGAFN-------------CGGEYNCIDPEAVCVEDDD 158
            V++DD      E+C +    GDG CHE+ N E+CGYDGGDCC CTC  P A +             CGG + CIDP A CV+DD+
Sbjct:  121 VEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDE 205          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.710e-11
Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   87 STVDEDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTC-----EPGAFNCGGEYNCIDPEAVCVEDDD 158
            S VD+DD      ++CD    GDG C +D N E+CGYDGGDCC CTC     +   + C     CIDP+A CV+DDD
Sbjct:   58 SCVDDDDITVEIAQNCDTWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDD 134          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.160e-11
Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   91 EDDEPGGSYEDCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCE---PGAFNCGGEYNCIDPEAVCVEDDD 158
            +DD   G +EDC F+F GDG C++  N E CGYDGGDCC CTC       F C  E+ CIDP A CV+DDD
Sbjct:  197 DDDVTEGMFEDC-FNF-GDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCT-EFACIDPTAPCVDDDD 264          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 4.930e-11
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   89 VDEDDEPGGSYEDCDFSFA-GDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGG--EYNCIDPEAVCVEDDD 158
            VD+D       E+C +S   GDG C E+LNT  C YDGGDCCSCTCE    +  G   + CIDPEA CV+DDD
Sbjct:  112 VDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMWFACIDPEAACVDDDD 184          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 5.390e-11
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   99 YEDCDFSF-AGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGGEYN--CIDPEAVCVEDD 157
            ++ CD +   G+G+C+   N E CG+DGGDCC CTCE G + CG  Y   CIDP+A CV+DD
Sbjct:   89 FDACDAAQDIGNGRCNMGNNIEECGFDGGDCCECTCEDGEYTCGQYYGYACIDPDATCVDDD 150          
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 8.850e-11
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   89 VDEDDEPGGSYEDCDF-SFAGDGKCHEDLNTEVCGYDGGDCCSCTCEP-----GAFN-----CGGEYNCIDPEAVCVEDDD 158
            VD+DD      E+C +    G+G C E+ N E CGYDGGDCC CTC+P     G  +     CG  + CIDP A CV DDD
Sbjct:  111 VDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDD 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig90.17193.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
LNR9.280e-10391.71domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
LNR5.990e-1360.34domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.340e-1248.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.450e-1154.93protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.650e-1145.88protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.710e-1148.05protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.160e-1154.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.930e-1153.42protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.390e-1151.61protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized8.850e-1146.91protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 90..129
e-value: 0.0016
score: 23.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..222
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.731

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig90contigEcto-sp9_F_contig90:45701..48449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig90.17193.1mRNA_Ecto-sp9_F_contig90.17193.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig90 41886..49339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig90.17193.1 ID=prot_Ecto-sp9_F_contig90.17193.1|Name=mRNA_Ecto-sp9_F_contig90.17193.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=223bp
MFFSRRTALLVVVAATALLASDHVSLAATTTDQDTTGTTVTATSMEPTGT
TPTGTTDTATSMESTGTTSTGTTDSTTSMEPTSTTTSTVDEDDEPGGSYE
DCDFSFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGGEYNCIDPE
AVCVEDDDGDGGELTTAELEDDGITDEMADDARTADDDTSASGTTSFSSI
VTGVATAAGAASVFAAFALCPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom