prot_Ecto-sp9_F_contig8989.17181.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8989.17181.1
Unique Nameprot_Ecto-sp9_F_contig8989.17181.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length239
Homology
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Clu (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 9.670e-169
Identity = 233/239 (97.49%), Postives = 236/239 (98.74%), Query Frame = 0
Query:    1 QAWRDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGVGLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGDRFQV 239
            +AW+DTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDI YKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYL TGVGLC+PPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARG RFQV
Sbjct:   75 KAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGHRFQV 313          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: CLU (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA)

HSP 1 Score: 211 bits (536), Expect = 7.900e-65
Identity = 109/201 (54.23%), Postives = 136/201 (67.66%), Query Frame = 0
Query:   13 GMARVQMSDRGDNWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGV 212
            G+ RV++ D GDNWN  +QEA +LP  T+M+ TYK   L  VY DF   AV YGRTIISE+FLH Y++S++P+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG S Y   GV GL   PMC+LDYKGFRM+  A LPLG  +L  G++DGG  V+    + D   A   +    R  + P    G 
Sbjct:   19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVG---VGDAEVARVLEEAAARLRLRPHPCRGT 216          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Clu (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 9.280e-56
Identity = 104/192 (54.17%), Postives = 125/192 (65.10%), Query Frame = 0
Query:   25 NWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKP-KRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIGPRDWVGVQE 214
            NWN+ +Q AL LP  T      K   +  V  DF   AVTYG+TIISEYFL    KS+KP + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL   + GL     CL+DYKGFRM AQA LP+   +L+ G++D GRTV ND   L K+    AK L LR H     WV  +E
Sbjct:   10 NWNELFQSALDLPEDTPDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH-----WVNDKE 196          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Clu (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 3.720e-55
Identity = 108/204 (52.94%), Postives = 136/204 (66.67%), Query Frame = 0
Query:    1 QAWRDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 203
            ++W    EL+F         + G NWN+ +Q AL LP +T      K   L  V  DF  TAVTYG+TIISEYFL    KS++ K LGG+AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL     CL+DYKGFRM AQA LP+ + SL+ G+++GG+TV N+   L K+   AAK L LR H
Sbjct:  224 RSWERFRELVFPDDMEQAYRETG-NWNELFQSALDLPEETPDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTH 426          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: CLU (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.000e-43
Identity = 85/161 (52.80%), Postives = 109/161 (67.70%), Query Frame = 0
Query:   47 KRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGV-GLCVPPMCLLDYKGFRMLAQAHLPL-GETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHIG 205
            K ++L A+  DF+  AVTYGRTIISEYFL E  KSV P  +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA  ++L+GA   ++  + GL      L+DYKGFRM AQA LPL    +L+ G+ D G TV++    L  +  + A  L L+AH G
Sbjct:   19 KYQALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAHRG 179          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG52_HETAK)

HSP 1 Score: 134 bits (336), Expect = 3.880e-36
Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 0
Query:   23 GDNWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELR 129
            GD+WN+R+Q A+SLP  T  +   K   L +V  DF+ TA TY +T+ISEYFL E++KSVK  + GG+AGG+KY WRGILFKLADG  GPY GSD AAAKA GH+LR
Sbjct:   37 GDDWNERFQHAISLPESTDEEKLLKYTLLTSVNRDFIATAETYAKTVISEYFLPEHLKSVKSGQFGGIAGGRKYCWRGILFKLADGQCGPYEGSDAAAAKAMGHDLR 143          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA)

HSP 1 Score: 133 bits (335), Expect = 5.920e-34
Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = 0
Query:   25 NWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGVG-LCVPPMCLLDYKGFRMLAQAHLPL 164
            +WN+R+Q  L LP+ +  +  ++   L A Y+DFV TA TYG  +ISE FL+E +K++  + + GLAGG+KY +RGI FKLA G + PYGG   AA+KA GHEL+GA+ Y R  V  L +P   L+DY+G+R+LAQ  LP+
Sbjct:   29 DWNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPI 168          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Uncharacterized (protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2S8_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 1.240e-32
Identity = 73/180 (40.56%), Postives = 111/180 (61.67%), Query Frame = 0
Query:   25 NWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPK-RLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGVGLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 203
            +WND +Q+ L+LP  T+ +  +K   L ++  DFVH A T+G+ IISE +LH   +++ P   +GG+AGG+KY++ GILFK A   +  YGG D  A KAA HEL+  + Y     G+ VP M L++Y+G+R++A + +P+   +L  G+ DGG TVL      ++   MA K L L+ H
Sbjct:  170 DWNDEFQKILALPENTEDEKLHKYSELSSLNKDFVHIAKTFGKIIISERYLHAKHRTINPTTEVGGVAGGEKYVYHGILFKFAIDWRNLYGG-DHNAMKAANHELQAVTRYYECE-GISVPLMTLIEYRGYRLVAMSWVPITSRTLVYGSQDGGYTVLASDEKCNRLMQMAGKRLNLKGH 347          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Tetratricopeptide (repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ57_ACACA)

HSP 1 Score: 133 bits (335), Expect = 5.240e-32
Identity = 71/166 (42.77%), Postives = 108/166 (65.06%), Query Frame = 0
Query:   40 TKMDITYK-RRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 203
            T +D  Y   R+L  +  DF++++ +YGR IISE F+ ++MK++KP  +GG+ GG KY+   ILFK A  S G YG SD AA+K AGHEL+G   Y   G+  LC+P M L+DY+GFR+LA + LP+ ++++  G+ND G T+  +   L  +  +AA+ L ++ H
Sbjct:  276 TPLDERYNTNRALIHLAQDFIYSSCSYGRIIISEAFVPDHMKTIKPTAMGGIVGGDKYIVNNILFKFAVDSHGLYG-SDYAASKVAGHELKGLLAYFNLGIRDLCLPLMALIDYRGFRLLAMSILPIKKSTIVYGSNDYGHTMHAENKKLGAKMRIAARKLNIKPH 440          
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Match: Clu (domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZU77_DICPU)

HSP 1 Score: 132 bits (331), Expect = 1.880e-31
Identity = 77/183 (42.08%), Postives = 111/183 (60.66%), Query Frame = 0
Query:   25 NWNDRWQEALSLPNKTKMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQ--GPYGGSDEAAAKAAGHELRGASEYLRTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI 204
            +WN  +Q  L +      D   K   L ++  DFV+ A TYGR IISE FL   +K++KP  +GG+AGG+KY+ +GILFK A  ++  G YG SDE A K A HEL G + +L  G+ GL VP M  +DY+GFR++A + LP+ + SL  G+ D G+TV     I +     A+K + L++H+
Sbjct:  256 SWNSEFQRLLEMD-----DCLEKFERLSSLEHDFVYAAETYGRIIISENFLSNELKTIKPVSVGGIAGGEKYIVQGILFKFALENETFGLYG-SDENAMKTAAHELNGCTSFLNCGIKGLHVPLMAYIDYRGFRLMAMSLLPISKKSLIYGSCDAGQTVHTSNNIFNHLFGNASKIVNLKSHM 432          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8989.17181.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Clu9.670e-16997.49domain-containing protein n=1 Tax=Ectocarpus silic... [more]
CLU7.900e-6554.23domain-containing protein n=1 Tax=Tribonema minus ... [more]
Clu9.280e-5654.17domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Clu3.720e-5552.94domain-containing protein n=1 Tax=Ectocarpus silic... [more]
CLU5.000e-4352.80domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Hypothetical3.880e-3660.75protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical5.920e-3448.94protein (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
Uncharacterized1.240e-3240.56protein n=1 Tax=Planoprotostelium fungivorum TaxID... [more]
Tetratricopeptide5.240e-3242.77repeat domain containing protein n=1 Tax=Acanthamo... [more]
Clu1.880e-3142.08domain-containing protein (Fragment) n=1 Tax=Dicty... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025697CLU domainPFAMPF13236CLUcoord: 25..210
e-value: 7.8E-36
score: 124.0
IPR025697CLU domainPROSITEPS51823CLUcoord: 3..239
score: 34.139
NoneNo IPR availablePANTHERPTHR12601:SF11coord: 42..204
NoneNo IPR availablePANTHERPTHR12601EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3coord: 42..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8989contigEcto-sp9_F_contig8989:351..5222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8989.17181.1mRNA_Ecto-sp9_F_contig8989.17181.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8989 351..5222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8989.17181.1 ID=prot_Ecto-sp9_F_contig8989.17181.1|Name=mRNA_Ecto-sp9_F_contig8989.17181.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=239bp
QAWRDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDITYKRRS
LDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRG
ILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLRTGVGLCVPPMCLLD
YKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGL
RAHIGPRDWVGVQEEEKRGGPDTPRGGGRGRARGDRFQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025697CLU_dom