prot_Ecto-sp9_F_contig8988.17180.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8988.17180.1
Unique Nameprot_Ecto-sp9_F_contig8988.17180.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length579
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8988.17180.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84_ECTSI)

HSP 1 Score: 884 bits (2283), Expect = 6.280e-316
Identity = 523/580 (90.17%), Postives = 528/580 (91.03%), Query Frame = 0 
Query:    1 MTLRDMDDPYEDDAAVKAQAVQSVAKLIKSSSQVHLKGAAGTDEAAIPTLDETISETSRRVLAWVERAAXXXXXXXXXXXXXXXXXXXFPPVLLTSCCRYMEALATAYPARFSADCRSLARPVASCVLVMTTAAEVHVSEIGVAVPCREAKVEGGENDDGLPSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRTSSRSGLAEAASGDDDISRDPSGEHGDDPFDSDNEXXXXXXXXXXXXGSRVSGDGKARSRWVAGWMRRAGVTLAEPLECPFDVRPGGRDEDLPARLATLISYHAQAAASASRPASVXXXXXXXXXXXXXXXXXXXXXXXXXXTPSESHAAVVEEAFLCLLCLSETVPESSAQAECVKAALVSLKECAQSARWRCLEHRVPAALSMLEGVPSRLKLLLTR-RSQGAKVYSTARSFCREALTAAVACARKLIGLAGGPVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLAREAGAEEIRPHRNRLGMDLFSLA 579
            M LRDMDDPYEDDA VKAQAVQSVAK IKSSSQVHLKGAAGTDEAA  TLDETISETSRRVLAWVE AA                   FPPVLLTSCCRYMEALATAYPARFSADCRSLARPVASCVLVMT  A+ H S IGVAVPCRE K EG ENDDG PSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRT+SRSGL EA SGDDD SRDPSGEHGDDPFDSD  XXXXXXXXXXXXGSRVSGDGKARSRWVAGWMRRAG+TLAEPLECPFDVRPGGRDED+P RLATLISYHAQAAASASRPASV XXXXXXXXXXXXXXXXXXXXXXXXXTPSESHA VVEEAF CLLCLSETVPESSAQAECVKAALVSLKECAQSAR RCLEHRVPAALSMLEGVPSRLKLLLTR +SQGAKVYSTARSFCREALTAAVACARKLIGL GG VVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLAR AGAEEIRPHRNRLGM L   A
Sbjct:    1 MALRDMDDPYEDDATVKAQAVQSVAKQIKSSSQVHLKGAAGTDEAATRTLDETISETSRRVLAWVECAAAAAAAPHSSDGRRV-----FPPVLLTSCCRYMEALATAYPARFSADCRSLARPVASCVLVMTRTAKAHDSAIGVAVPCRETKGEGEENDDGFPSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRTTSRSGLGEATSGDDDNSRDPSGEHGDDPFDSDXXXXXXXXXXXXXXGSRVSGDGKARSRWVAGWMRRAGITLAEPLECPFDVRPGGRDEDMPVRLATLISYHAQAAASASRPASVSXXXXXXXXXXXXXXXXXXXXXXXXXTPSESHALVVEEAFSCLLCLSETVPESSAQAECVKAALVSLKECAQSARLRCLEHRVPAALSMLEGVPSRLKLLLTRSKSQGAKVYSTARSFCREALTAAVACARKLIGLVGGLVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLARAAGAEEIRPHRNRLGMALVECA 575
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8988.17180.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized6.280e-31690.17protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8988contigEcto-sp9_F_contig8988:1128..5288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8988.17180.1mRNA_Ecto-sp9_F_contig8988.17180.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8988 1128..5288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8988.17180.1 ID=prot_Ecto-sp9_F_contig8988.17180.1|Name=mRNA_Ecto-sp9_F_contig8988.17180.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=579bp
MTLRDMDDPYEDDAAVKAQAVQSVAKLIKSSSQVHLKGAAGTDEAAIPTL
DETISETSRRVLAWVERAAAAAAAAAAAAPHGSGGRRVFPPVLLTSCCRY
MEALATAYPARFSADCRSLARPVASCVLVMTTAAEVHVSEIGVAVPCREA
KVEGGENDDGLPSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRT
SSRSGLAEAASGDDDISRDPSGEHGDDPFDSDNEEEEDGADDDEEEGSRV
SGDGKARSRWVAGWMRRAGVTLAEPLECPFDVRPGGRDEDLPARLATLIS
YHAQAAASASRPASVSSLATVLAVLVAFTAAGADGEDGRDGTPSESHAAV
VEEAFLCLLCLSETVPESSAQAECVKAALVSLKECAQSARWRCLEHRVPA
ALSMLEGVPSRLKLLLTRRSQGAKVYSTARSFCREALTAAVACARKLIGL
AGGPVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEG
GEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLK
ATAWLAREAGAEEIRPHRNRLGMDLFSLA
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