prot_Ecto-sp9_F_contig8980.17176.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 149 bits (375), Expect = 7.910e-38 Identity = 95/235 (40.43%), Postives = 129/235 (54.89%), Query Frame = 0
Query: 1 WVGDSGASVHGTSSRCHMYNTRPPTAAEQFLLIGNGASMEVVCMGSLDLLLLCDTTVRLTLTNVAYVPGLEYDLMSFNLLQDEYDILLNKHGASMMDGTVHFVK--DGGHGQSSGDG-GIS---------RTRRDASGGFGQSSVSGG--------------GHWFTV---FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
W+GDS ++VH TS H+YNTRPP A E FL IG+G ++ C GSLD++ C V +T+ ++A VP L +DL+S N++Q+ +D+LLN G +++G VHF K G + Q++ G S R R S VS G G T +C GC K IR+++ K T + A RP RLF DLTGP PPS GGA YC+ VVDD +N G F+
Sbjct: 16 WIGDSASTVHATSDGTHVYNTRPPLAEETFLFIGDGRKLKAECFGSLDVVFHCREDVLVTMKDIAVVPDLAFDLVSLNVIQETHDLLLNSAGTWILNGRVHFSKLPTGNYIQATRIAHGASPPAMVAATVRPGRPRSININDLHVSLGHTNDANARETAKQLGIQVTGTRGYCAGCGEAKAIRRSVPKETKAKAGRPFGRLFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFL 250
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT8_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.730e-28 Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
FCDGC VGKGIRKAIS TTSST SRPLQRL ADLTGPLPPSAGG TYCLAVVDDNTNYGIVKFI
Sbjct: 184 FCDGCAVGKGIRKAISTTTSSTVSRPLQRLLADLTGPLPPSAGGDTYCLAVVDDNTNYGIVKFI 247
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL30_9PHAE) HSP 1 Score: 105 bits (263), Expect = 5.440e-23 Identity = 55/64 (85.94%), Postives = 56/64 (87.50%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
F DGC VGKGIRKAIS TTSSTASRPLQRLFADLTGPLPPSAGG TYCLA+VDDN IVKFI
Sbjct: 48 FSDGCAVGKGIRKAISTTTSSTASRPLQRLFADLTGPLPPSAGGTTYCLALVDDN-QLRIVKFI 110
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW0_9PHAE) HSP 1 Score: 100 bits (248), Expect = 6.880e-21 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0
Query: 142 VFCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
VFC GC VGKGIRKAI++TTSSTA+RPLQR FADL GPLP SA G+ Y L +VDD TN+G++KF+
Sbjct: 100 VFCGGCAVGKGIRKAIARTTSSTAARPLQRFFADLAGPLPRSAAGSAYVLCIVDDCTNFGVLKFL 164
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Reverse (transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C4_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.160e-19 Identity = 45/65 (69.23%), Postives = 53/65 (81.54%), Query Frame = 0
Query: 142 VFCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
VFC C VGKGIRK I++TTSSTA RPLQ FADL GPLP SAGG+TY L +VDD TN+G++KF+
Sbjct: 107 VFCGWCAVGKGIRKVIARTTSSTAVRPLQLFFADLAGPLPRSAGGSTYVLCIVDDCTNFGVLKFL 171
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID9_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 3.060e-19 Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
FCDGC VGK IRKA S TT+STASRPLQRLFADLTG LP S GGATY L +VDD TN GI K +
Sbjct: 208 FCDGCAVGKDIRKAFSTTTTSTASRPLQRLFADLTGQLPASTGGATYYLVLVDDYTNDGITKLM 271
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D3_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.430e-11 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
+C GC K IR+++ K T + A RP R+F DLTGP PPS GGA YC+ VVDD +N G F+
Sbjct: 48 YCAGCGEAKAIRRSVPKETKAKAGRPFGRVFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFL 111
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H9_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 2.590e-11 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
+C GC V K IR+++ T + A RP R F DLTGP PPS GGA YC+ VVDD +N G F+
Sbjct: 239 YCAGCGVAKAIRRSVPMETKAKAERPFGRAFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFL 302
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM9_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 9.220e-11 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLPPSAGGATYCLAVVDDNTNYGIVKFI 206
+C GC K IR+++ K + A RP R+F DLTGP PPS GGA YC+ VVDD +N G F+
Sbjct: 48 YCAGCGEAKAIRRSVPKEPQTKAGRPFGRVFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFL 111
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Match: Retrovirus-related (Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YZ05_LYGHE) HSP 1 Score: 58.2 bits (139), Expect = 1.860e-6 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query: 143 FCDGCTVGKGIRKAISKTTSSTASRPLQRLFADLTGPLP-PSAGGATYCLAVVDDNTNYGIVKFI 206
FCDGC +GK R S AS+P +R+F+DL GP+P PS GGA Y + DD + Y +V F+
Sbjct: 450 FCDGCAIGKQHRLPFVSGNSWKASKPGERIFSDLCGPMPEPSLGGAHYFILFKDDCSGYRVVFFL 514 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8980.17176.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig8980.17176.1 ID=prot_Ecto-sp9_F_contig8980.17176.1|Name=mRNA_Ecto-sp9_F_contig8980.17176.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=206bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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