prot_Ecto-sp9_F_contig898.17175.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig898.17175.1
Unique Nameprot_Ecto-sp9_F_contig898.17175.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length414
Homology
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Putative (ATP-dependent helicase YFR038W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG7_ECTSI)

HSP 1 Score: 579 bits (1493), Expect = 6.540e-198
Identity = 381/415 (91.81%), Postives = 382/415 (92.05%), Query Frame = 0
Query:    1 MVITAKAQGGRKSPGKAKPEGAPKAKSASPQTVSELAQAADVMEGKRLEDAQKEAEKEWQELEAANTEVEEGGXXXXXXXXXXXXVPALLQMAXNXXXXXXXXXXXXXXKQAGMLLVRADGVTDENSNASARLSNTATATNGKSGGDERSSAPEKEASSPAGRGPVAENSENSGGGARQAQLASLLSKAEQYSMFIRQSQIDVEASRPIAPTKEEDEKGEKEDAAAKQXXXXXXXXXXXXXXGKKRSPGKLSPSSRGKKGKSSSGKAFSSAASKMKKAKEEAAAREKDDDSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            MVITAKAQG RKSPGKAKPEGAPKAKSASPQTVSELAQAADVMEGKRLEDAQKEAEKEWQELEAANTEVEEGGXXXXXXXXXXXX        X XXXXXXXXXXXXXX QAGMLLVRADGVTDENSNASAR SNTATATNGKSGG E SSAPEKEASSPAGRG VAENSENSGGGARQAQLASLL KAEQYSMFIRQSQ+DVEASRPIA TKEEDEKGE        XXXXXXXXXXXXX GKKRSPGK SPSSRGKKGKSS G AFSSAASKMKKAKEEAAAREKDD SFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQ   LIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE
Sbjct:    1 MVITAKAQGRRKSPGKAKPEGAPKAKSASPQTVSELAQAADVMEGKRLEDAQKEAEKEWQELEAANTEVEEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGMLLVRADGVTDENSNASARPSNTATATNGKSGGKEGSSAPEKEASSPAGRGGVAENSENSGGGARQAQLASLLCKAEQYSMFIRQSQMDVEASRPIALTKEEDEKGENXXXXXXXXXXXXXXXXXXXXGGKKRSPGKRSPSSRGKKGKSSGGNAFSSAASKMKKAKEEAAAREKDDGSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 415          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB1_9PHAE)

HSP 1 Score: 564 bits (1454), Expect = 6.410e-192
Identity = 338/414 (81.64%), Postives = 348/414 (84.06%), Query Frame = 0
Query:    1 MVITAKAQGGRKSPGKAKPEGAPKAKSASPQTVSELAQAADVMEGKRLEDAQKEAEKEWQELEAANTEVEEGGXXXXXXXXXXXXVPALLQMAXNXXXXXXXXXXXXXXKQAGMLLVRADGVTDENSNASARLSNTATATNGKSGGDERSSAPEKEASSPAGRGPVAENSENSGGGARQAQLASLLSKAEQYSMFIRQSQIDVEASRPIAPTKEEDEKGEKEDAAAKQXXXXXXXXXXXXXXGKKRSPGKLSPSSRGKKGKSSSGKAFSSAASKMKKAKEEAAAREKDDDSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQATLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            MVI  KAQGGRKS GK KPEGAPKAKSASPQTVSELAQAADVMEGKRLEDAQKEAEKEWQELEAANTEVEEGG            VPALLQMA N              KQAGMLL RAD VTD++SNASA+ SNTATATNGKS  +ERSSA EKEASSPAGRGP AEN ENSGGGARQAQLASLL KAEQYSMFIRQSQ+DVEASRPIAPTK+EDE+GEK+DAAA+Q  XXXXXXXXXXX G KRSPG                     AA+KMKKAKEEAAAREKDD SFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQATLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE
Sbjct:    1 MVIAVKAQGGRKSLGKTKPEGAPKAKSASPQTVSELAQAADVMEGKRLEDAQKEAEKEWQELEAANTEVEEGGGGCGDGGEGENKVPALLQMAANQVQQDETLTEEERRKQAGMLLARADSVTDQDSNASAKQSNTATATNGKSDSEERSSAAEKEASSPAGRGPAAENGENSGGGARQAQLASLLCKAEQYSMFIRQSQMDVEASRPIAPTKQEDERGEKDDAAAEQEGXXXXXXXXXXXGGNKRSPGXXXXXXXXXXXXXXXXXXXXXAATKMKKAKEEAAAREKDDGSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQATLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G339_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.190e-47
Identity = 121/243 (49.79%), Postives = 139/243 (57.20%), Query Frame = 0
Query:  181 QLASLLSKAEQYSMFIRQSQIDVEASRPIAPTKEEDEKGEKEDAAAKQXXXXXXXXXXXXXXGKKRSPGKLSPSSRGKKGK-SSSGKA-------FSSAASKMKKAKEEAAAREKDDDSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            QL +LL+KA QYS FIR SQ                      D AA+               G KR  G        K  K S SG+A        + AA KMK +++ A           QP NL GG LKPYQLEGLRWL TLYENGLSGILADEMGLGKTIQ   LIA+LR+KGV GPF+V APLATLPNW +EF+KWLP V  +LYHGSK  R  LR T M+   A S+ FPV++TSYE
Sbjct:  100 QLDTLLAKASQYSEFIRSSQ----------------------DQAAETFDATAQAALGSPSKGGKRKNGSRGTXXXXKXAKVSDSGEAAQKSETGLADAAKKMKNSRDAAP-------EAWQPENLTGGQLKPYQLEGLRWLTTLYENGLSGILADEMGLGKTIQVIALIAYLRTKGVKGPFIVAAPLATLPNWTREFKKWLPGVQTLLYHGSKAERVHLRSTRMQLAAAASAEFPVIITSYE 313          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y786_AURAN)

HSP 1 Score: 179 bits (454), Expect = 3.130e-46
Identity = 87/136 (63.97%), Postives = 104/136 (76.47%), Query Frame = 0
Query:  281 EAAAREKDDDSF-RQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            EA A+ K D +  +QP+ + GGTLKPYQ+EGLRWL TL+ENGLSGILADEMGLGKTIQ   LIAH+R K V GP  V APLATLPNW+ EF+KW+P +  +LYHGSK HR++LR+T M   L     FPV+VTSYE
Sbjct:  144 EAQAKMKGDRNLVQQPTGMTGGTLKPYQVEGLRWLATLFENGLSGILADEMGLGKTIQVIALIAHIREKNVKGPICVAAPLATLPNWMNEFKKWVPGISALLYHGSKQHRADLRKTAMATSLQNEEDFPVIVTSYE 279          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QEQ7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.160e-45
Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 0
Query:  271 AASKMKKAKEEAAAREKDDDSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            AASKM K+K +A A       FRQP  +V G LK YQLEGLRWL +L+ENGLSGILADEMGLGKTIQ    +A+LR+K V+GPFL+ APLATLPNWVKEF KW+P++  +LYHGSK  R  LRRT M P  A+ + FPV++TSYE
Sbjct:  199 AASKMSKSKAKAGA-------FRQPDIMVNGELKDYQLEGLRWLASLFENGLSGILADEMGLGKTIQVIAFLAYLRTKDVSGPFLIAAPLATLPNWVKEFHKWVPSMPCLLYHGSKAERETLRRTRMPPAGAKGANFPVIITSYE 336          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXA1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.580e-44
Identity = 79/122 (64.75%), Postives = 94/122 (77.05%), Query Frame = 0
Query:  294 QPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            QP  + GGTLKPYQ+EGLRWL TL+ENGLSGILADEMGLGKTIQ   L+AH+R K V GP  + APLATLPNW+ EF+KW P +  +LYHGSK HR++LR+T M+        FPV+VTSYE
Sbjct:  154 QPKAMTGGTLKPYQVEGLRWLATLFENGLSGILADEMGLGKTIQVIALVAHVREKNVKGPICIAAPLATLPNWMNEFRKWTPGISALLYHGSKQHRADLRKTAMRKAHQNDDDFPVIVTSYE 275          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.410e-43
Identity = 80/122 (65.57%), Postives = 99/122 (81.15%), Query Frame = 0
Query:  294 QPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            QP N+V GTLKPYQLEGLRWLVTL++NG+SGILADEMGLGKTIQ   L+AH+R K V G FL+TAPLATLPNW+ E +KW+P++ V+LYHG+K+ R+ +R T M    + +  FPVVVTSYE
Sbjct:  202 QPRNMVNGTLKPYQLEGLRWLVTLWQNGMSGILADEMGLGKTIQIIALLAHMREKNVKGNFLITAPLATLPNWINEMKKWVPSIPVVLYHGTKEERARMRSTRMSVSRSNAVDFPVVVTSYE 323          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2I2_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.180e-42
Identity = 77/122 (63.11%), Postives = 96/122 (78.69%), Query Frame = 0
Query:  294 QPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            QP+NLVGGTL PYQ+EGL+WL++L+ENGL+GILADEMGLGKTIQ  +LIAHLR     GP+L+  PLAT+ NWV EF+KWLP+  V+LYHGSK  R  +R   M  R A+S  FP+V+TS+E
Sbjct:   98 QPANLVGGTLMPYQIEGLQWLLSLWENGLNGILADEMGLGKTIQIISLIAHLRLNNTAGPYLIAGPLATISNWVNEFRKWLPSCPVLLYHGSKAEREAMRHKFMPVRDAKSLTFPIVITSFE 219          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Helicase (ATP-binding domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YIS3_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.260e-40
Identity = 71/124 (57.26%), Postives = 93/124 (75.00%), Query Frame = 0
Query:  292 FRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQAT-LIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            F+QP  L GGTL+ YQLEG+RWL  L+ENGL+GILADEMGLGKTIQ   L+AHL++ GV GP L+ APL+TL NW  EF+KW P++ V++YHG+K  R E+R+  +  +      FPVV++SYE
Sbjct:  135 FKQPKLLTGGTLRDYQLEGIRWLCNLFENGLNGILADEMGLGKTIQVIGLLAHLKALGVRGPHLIVAPLSTLMNWATEFRKWAPSMPVVIYHGTKQERKEMRKHALNRKRRSDVDFPVVISSYE 258          
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH34_PYTOL)

HSP 1 Score: 162 bits (411), Expect = 2.240e-40
Identity = 80/146 (54.79%), Postives = 106/146 (72.60%), Query Frame = 0
Query:  272 ASKMKKAKEEAA--AREKDDDSFRQPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQAT-LIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYE 414
            A K+K+ +E+A    R++    F+QP  L GGTL+ YQLEG+RWL  L+ENGL+GILADEMGLGKTIQ   LIAHL+S GV GP+L+ APL+TLPNW  EFQKW P +  ++YHG+++ R +LR+T +         FPV++TSYE
Sbjct:   99 AKKLKQVQEDAKLDTRQQPPVEFQQPKLLTGGTLRSYQLEGIRWLCNLFENGLNGILADEMGLGKTIQVIGLIAHLKSLGVRGPYLIVAPLSTLPNWETEFQKWAPTIPSLIYHGTRECRKQLRKTQLDKSKKNDEDFPVIITSYE 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig898.17175.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative6.540e-19891.81ATP-dependent helicase YFR038W n=1 Tax=Ectocarpus ... [more]
Uncharacterized6.410e-19281.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical3.190e-4749.79protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized3.130e-4663.97protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.160e-4563.45protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical2.580e-4464.75protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical1.410e-4365.57protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical5.180e-4263.11protein (Fragment) n=2 Tax=Spumella elongata TaxID... [more]
Helicase1.260e-4057.26ATP-binding domain-containing protein n=1 Tax=Phyt... [more]
Uncharacterized2.240e-4054.79protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..72
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 40..414
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 270..414
e-value: 2.2E-42
score: 146.7
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 313..414
e-value: 1.4E-17
score: 63.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 315..414
score: 11.66
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 283..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig898contigEcto-sp9_F_contig898:20771..28427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig898.17175.1mRNA_Ecto-sp9_F_contig898.17175.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig898 20771..28427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig898.17175.1 ID=prot_Ecto-sp9_F_contig898.17175.1|Name=mRNA_Ecto-sp9_F_contig898.17175.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=414bp
MVITAKAQGGRKSPGKAKPEGAPKAKSASPQTVSELAQAADVMEGKRLED
AQKEAEKEWQELEAANTEVEEGGAGGGDDGEGEKKVPALLQMAANQVQQD
ETLTEEERRKQAGMLLVRADGVTDENSNASARLSNTATATNGKSGGDERS
SAPEKEASSPAGRGPVAENSENSGGGARQAQLASLLSKAEQYSMFIRQSQ
IDVEASRPIAPTKEEDEKGEKEDAAAKQESEDEGAGSGRGRGGKKRSPGK
LSPSSRGKKGKSSSGKAFSSAASKMKKAKEEAAAREKDDDSFRQPSNLVG
GTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQATLIAHLRSKGVN
GPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRL
ARSSCFPVVVTSYE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase