prot_Ecto-sp9_F_contig8979.17171.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8979.17171.1
Unique Nameprot_Ecto-sp9_F_contig8979.17171.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length182
Homology
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ6_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.680e-89
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0
Query:   26 MQQGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGIGDRGADRLEDDLD 182
            M +GRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLR+SAEE ASRLEAKLEERR+VRERKNSV+RFLRFMSTLDTAEGVLGIGD GADRL+DDLD
Sbjct:    1 MLEGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRVSAEEAASRLEAKLEERRIVRERKNSVRRFLRFMSTLDTAEGVLGIGDMGADRLDDDLD 157          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 9.330e-88
Identity = 154/158 (97.47%), Postives = 156/158 (98.73%), Query Frame = 0
Query:   26 MQQGRSKHACCFAVEVFDDAQ-FDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGIGDRGADRLEDDLD 182
            MQ+GRSKHACCFAVEVFDDAQ FDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLR+SAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVL IGDRGADRLEDDLD
Sbjct:    1 MQEGRSKHACCFAVEVFDDAQQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRVSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLEIGDRGADRLEDDLD 158          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA59_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.270e-20
Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 0
Query:   53 VASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGIGD 171
            +A  ++   LE+L + L  +L   K+ LY+LINRDYADFILVSTKLSGV +KVS L  P+  L ++   LR +   E  R+E  L ER  V+ R+ +V+R LRF+ +L++AE +LGI D
Sbjct:   49 IARAQASASLEQLHEQLDAYLGTLKKNLYELINRDYADFILVSTKLSGVENKVSDLATPIEALCSQIQALRAALSSELDRIEGVLAERTGVQTRRRTVKRCLRFLESLESAEMLLGISD 167          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DB39_MYTGA)

HSP 1 Score: 89.4 bits (220), Expect = 3.470e-18
Identity = 52/148 (35.14%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   24 LPMQQGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGIGD 171
            +P+  G +  + CF  +VF    FD   FV   R  VPLE LRDDL  +L   +  + +LIN+DYADF+ +ST L G+   +++L  P+  +  +   ++++ EE    +E KL+ R  +RE+K  +QR +  +S+++  E +LGI D
Sbjct:   26 VPLPSGPA--SLCFDKDVFMKDGFDVDNFVMECRRRVPLETLRDDLNTYLKILRSAMIELINKDYADFVNLSTNLVGMDKAITNLTVPLGEMKDQVMTVKVAMEEAVHAVEEKLKHREQIREKKACLQRLMNIISSVEKIEKLLGISD 171          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8C4S6_MYTCO)

HSP 1 Score: 90.5 bits (223), Expect = 7.720e-18
Identity = 52/148 (35.14%), Postives = 87/148 (58.78%), Query Frame = 0
Query:   24 LPMQQGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGIGD 171
            +P+  G +  + CF  +VF    FD   FV   R  VPLE LRDDL  +L   +  + +LIN+DYADF+ +ST L G+   +++L  P+  +  +   ++++ EE    +E KL++R  +RE+K  +QR +  +S+++  E +LGI D
Sbjct:    9 VPLPSGPA--SLCFDKDVFMKEGFDVDNFVMECRRRVPLETLRDDLNTYLKILRSAMIELINKDYADFVNLSTNLVGMDKAITNLTVPLGEMKDQVMTVKVAMEEAVHAVEEKLKQREQIREKKACLQRLMNIISSVEKIEKLLGISD 154          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1PZP3_CRAGI)

HSP 1 Score: 87.4 bits (215), Expect = 9.210e-17
Identity = 51/146 (34.93%), Postives = 83/146 (56.85%), Query Frame = 0
Query:   24 LPMQQGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGI 169
            LP+  G +  + CF  +VF    FD   FV   R  VPLE LRDDL  +L   +  + +LIN+DYADF+ +ST L G+   + +L  P+  L      ++ + E+    +E KL++R  +R++K S+QR +  + +++  E +LGI
Sbjct:    9 LPLPSGPA--SLCFDKDVFMQENFDVDQFVMECRRRVPLENLRDDLNTYLKILRSAMIELINKDYADFVNLSTNLVGMDKAIGNLTTPLEHLKEEIMTVKTAMEDAILAVEEKLKKREQIRQKKASLQRLMNIIHSVEKIEKLLGI 152          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DYV0_CRAVI)

HSP 1 Score: 87.4 bits (215), Expect = 9.210e-17
Identity = 51/146 (34.93%), Postives = 82/146 (56.16%), Query Frame = 0
Query:   24 LPMQQGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGI 169
            LP+  G +  + CF  +VF    FD   FV   R  VPLE LRDDL  +L   +  + +LIN+DYADF+ +ST L G+   + +L  P+  L      ++ + E+    +E KL+ R  +R++K S+QR +  + +++  E +LGI
Sbjct:    9 LPLPSGPA--SLCFDKDVFMQENFDVDQFVMECRRKVPLENLRDDLNTYLKILRSAMIELINKDYADFVNLSTNLVGMDKAIGNLTTPLEHLKEEVMTVKTAMEDAILAVEEKLKRREQIRQKKASLQRLMNIIHSVEKIEKLLGI 152          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: conserved (oligomeric Golgi complex subunit 2 isoform X3 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009C07DE3)

HSP 1 Score: 85.1 bits (209), Expect = 5.680e-16
Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = 0
Query:   37 FAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVL 167
            F  EVF    FDP A+VA  R  VPLE LR +L+ HL+  K EL +LINRDYADF+ +STKL  V   V  +R P+  L AR S  R S E   + L   L++R      +  ++R L     +   E ++
Sbjct:   30 FKKEVFSQQDFDPDAYVADLRRFVPLESLRAELRAHLSTLKSELVELINRDYADFVSLSTKLVDVDGAVLRMRAPLNELRARISQFRASVEASFTSLRDGLQKRADAAASREVLERLLDTSHVVSKVEKLI 160          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=4 Tax=Pectinidae TaxID=6566 RepID=A0A210R646_MIZYE)

HSP 1 Score: 85.1 bits (209), Expect = 5.850e-16
Identity = 48/146 (32.88%), Postives = 85/146 (58.22%), Query Frame = 0
Query:   24 LPMQQGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLGI 169
            LP+  G +  + CF  ++F    FD   FV   R  VPLE LRDDL  +L   +  + +LIN+DYADF+ +S+ L G+   + +L  P+  L  +   ++++ ++  S +E KL++R  +R++K  +QR +  + +++  E +LGI
Sbjct:   11 LPLPSGPA--SLCFDNDMFMKDSFDVDTFVMECRRRVPLETLRDDLSTYLKILRSAMIELINKDYADFVNLSSNLVGMDKAIGNLTTPLCELKDQVMTVKIAMDQAISAVEQKLKQREQIRQKKACLQRLMNIVQSVEKIERLLGI 154          
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 2 n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PPL1_AMBTC)

HSP 1 Score: 85.1 bits (209), Expect = 5.930e-16
Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = 0
Query:   37 FAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVL 167
            F  EVF    FDP A+VA  R  VPLE LR +L+ HL+  K EL +LINRDYADF+ +STKL  V   V  +R P+  L AR S  R S E   + L   L++R      +  ++R L     +   E ++
Sbjct:   30 FKKEVFSQQDFDPDAYVADLRRFVPLESLRAELRAHLSTLKSELVELINRDYADFVSLSTKLVDVDGAVLRMRAPLNELRARISQFRASVEASFTSLRDGLQKRADAAASREVLERLLDTSHVVSKVEKLI 160          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8979.17171.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Conserved1.680e-8994.90oligomeric Golgi complex subunit 2 (Fragment) n=1 ... [more]
Conserved9.330e-8897.47oligomeric Golgi complex subunit 2 n=1 Tax=Ectocar... [more]
Conserved4.270e-2047.06oligomeric Golgi complex subunit 2 n=1 Tax=Tribone... [more]
Conserved3.470e-1835.14oligomeric Golgi complex subunit 2 n=1 Tax=Mytilus... [more]
Conserved7.720e-1835.14oligomeric Golgi complex subunit 2 n=1 Tax=Mytilus... [more]
Conserved9.210e-1734.93oligomeric Golgi complex subunit 2 n=2 Tax=Crassos... [more]
Conserved9.210e-1734.93oligomeric Golgi complex subunit 2 n=1 Tax=Crassos... [more]
conserved5.680e-1640.46oligomeric Golgi complex subunit 2 isoform X3 n=2 ... [more]
Conserved5.850e-1632.88oligomeric Golgi complex subunit 2 n=4 Tax=Pectini... [more]
Conserved5.930e-1640.46oligomeric Golgi complex subunit 2 n=3 Tax=Amborel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..143
IPR024602Conserved oligomeric Golgi complex, subunit 2, N-terminalPFAMPF06148COG2coord: 36..164
e-value: 5.8E-27
score: 94.4
IPR009316COG complex component, COG2PANTHERPTHR12961CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2coord: 23..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8979contigEcto-sp9_F_contig8979:1215..4495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8979.17171.1mRNA_Ecto-sp9_F_contig8979.17171.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8979 1215..4495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8979.17171.1 ID=prot_Ecto-sp9_F_contig8979.17171.1|Name=mRNA_Ecto-sp9_F_contig8979.17171.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=182bp
STRERERQRERQIERVLRRNSPLLPMQQGRSKHACCFAVEVFDDAQFDPS
AFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSG
VGSKVSHLREPMARLLARASGLRMSAEEEASRLEAKLEERRVVRERKNSV
QRFLRFMSTLDTAEGVLGIGDRGADRLEDDLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024602COG_su2_N
IPR009316COG2