prot_Ecto-sp9_F_contig895.17141.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig895.17141.1
Unique Nameprot_Ecto-sp9_F_contig895.17141.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length89
Homology
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAV8_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 5.710e-48
Identity = 78/88 (88.64%), Postives = 79/88 (89.77%), Query Frame = 0
Query:    1 PPRRSSHCCGGKVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            PP  S      +VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQG KVEARGGELRIEGDHATNVKRWLSGLGF
Sbjct:   61 PPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y004_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.270e-21
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V RT  G  +PVYRDI+NGRTR +TI+++  GD +   ++LSKVC G +V AR G L + GDHA ++K+WL+GLGF
Sbjct:   80 VKRTAVGLQLPVYRDIRNGRTRVLTILRRYHGDEEELRTELSKVCLGKEVVARPGRLEVVGDHARDIKKWLTGLGF 155          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D0NCG0_PHYIT)

HSP 1 Score: 89.4 bits (220), Expect = 9.940e-21
Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V RT  G  +PVYRD +NGRTR +TI+++  GD +    ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:   79 VKRTATGMQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EWI4_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.820e-20
Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V RT  G  +PVYRD +NGRTR +TI+++  GD      ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:   79 VKRTAVGMQLPVYRDFRNGRTRVLTILRRYKGDELELRDEMSKVCQGKEVVVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9Q0_PHYNI)

HSP 1 Score: 88.6 bits (218), Expect = 2.330e-19
Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V RT  G  +PVYRD +NGRTR +TI+++  GD +    ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:  199 VKRTAVGLQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 274          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRY2_PYTOL)

HSP 1 Score: 85.5 bits (210), Expect = 3.200e-19
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V RT  G  +PVYRD +NGRTR +TI+++  GD     +++SK+C G  V  R G L + GDHA+ VK+WL GLGF
Sbjct:   79 VKRTAVGLQLPVYRDYRNGRTRVLTILRRFNGDEGELQAEMSKICGGKDVVLRPGRLEVTGDHASEVKKWLVGLGF 154          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPU9_CAFRO)

HSP 1 Score: 82.8 bits (203), Expect = 1.750e-18
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V R G  G +PVYRDI++GRT+  T+V+K  GD +A   +L K+C+G  V  R G + ++GDH  +V R+LSGLG 
Sbjct:   50 VDRAGPAGSLPVYRDIRHGRTKIYTVVRKIRGDTEAMAQELHKLCRGAPVTQRPGRIEVDGDHKLDVVRYLSGLGL 125          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E697_BRELC)

HSP 1 Score: 83.6 bits (205), Expect = 1.810e-18
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0
Query:   13 VARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            V RT  G  +PVYRD +NGRTR +TI+++  GD      ++SK+C+G +V  R G + + GDH ++V++WL GLGF
Sbjct:   79 VKRTATGLQLPVYRDYRNGRTRVLTILRRYRGDEHELRDEMSKICEGKEVVIRPGRMEVVGDHFSDVRKWLVGLGF 154          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Ribosomal (protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACI1_PLAHL)

HSP 1 Score: 76.6 bits (187), Expect = 1.130e-16
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 0
Query:   26 RDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF 88
            RDI+NGRTR +TI+++  GD +    ++SKVCQG +V  R G + + GDHA+++++WL GLGF
Sbjct:    9 RDIRNGRTRILTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRMEVVGDHASDIRKWLVGLGF 71          
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Match: Ribosomal (protein L49/IMG2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6S8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.060e-16
Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 0
Query:   12 KVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGNKVEARGG-ELRIEGDHATNVKRWLSGLGF 88
            +V RT KG ++PVY D++ GRT+ +T+V+K +GD++    ++SKVC   +V  R G  L ++G +   +++WL+GLGF
Sbjct:   87 QVERTDKGRWLPVYTDVRKGRTQLITLVRKVSGDLEEMRGEMSKVCANQEVRIRTGPRLEVKGRYTAQLRQWLAGLGF 164          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig895.17141.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.710e-4888.64protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAV8... [more]
Uncharacterized1.270e-2153.95protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Uncharacterized9.940e-2150.00protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D... [more]
Uncharacterized2.820e-2050.00protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]
Uncharacterized2.330e-1950.00protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0... [more]
Uncharacterized3.200e-1950.00protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized1.750e-1847.37protein n=2 Tax=Cafeteria roenbergensis TaxID=3365... [more]
Uncharacterized1.810e-1846.05protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
Ribosomal1.130e-1649.21protein n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
Ribosomal2.060e-1641.03protein L49/IMG2 n=2 Tax=Monodopsidaceae TaxID=425... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.780.10coord: 2..88
e-value: 1.8E-15
score: 59.1
IPR007740Ribosomal protein L49/IMG2PFAMPF05046Img2coord: 13..88
e-value: 1.1E-20
score: 73.7
IPR007740Ribosomal protein L49/IMG2PANTHERPTHR13477MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49coord: 13..88
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 7..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig895contigEcto-sp9_F_contig895:28180..29122 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig895.17141.1mRNA_Ecto-sp9_F_contig895.17141.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig895 28180..29122 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig895.17141.1 ID=prot_Ecto-sp9_F_contig895.17141.1|Name=mRNA_Ecto-sp9_F_contig895.17141.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=89bp
PPRRSSHCCGGKVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFT
SDLSKVCQGNKVEARGGELRIEGDHATNVKRWLSGLGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007740Ribosomal_L49/IMG2
IPR036877SUI1_dom_sf