prot_Ecto-sp9_F_contig895.17134.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig895.17134.1
Unique Nameprot_Ecto-sp9_F_contig895.17134.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length167
Homology
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BLAST of mRNA_Ecto-sp9_F_contig895.17134.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAW4_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.760e-53
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0 
Query:   79 QMPRQFGRPKGERGGCPRGSSLNSETSRGVVSALPEPAPAGEHHLVTDARTKWNAAVLRCSDTVFSALYGRGGATEGKAKGGDEPRDS 166
            +MPRQFGRPKGERGGCPRGSS NSETSRGVVS LPEPAPAGEHHLVTDARTKWNAAVLRCSDTVFSALYGRG ATEGKA+GGDEPRDS
Sbjct:   50 KMPRQFGRPKGERGGCPRGSSFNSETSRGVVSGLPEPAPAGEHHLVTDARTKWNAAVLRCSDTVFSALYGRGSATEGKAEGGDEPRDS 137
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig895.17134.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.760e-5394.32protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAW4... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig895contigEcto-sp9_F_contig895:6959..7459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig895.17134.1mRNA_Ecto-sp9_F_contig895.17134.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig895 5378..8513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig895.17134.1 ID=prot_Ecto-sp9_F_contig895.17134.1|Name=mRNA_Ecto-sp9_F_contig895.17134.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=167bp
MFSHAFPMHRAGRLHFFTLLTSGDPTTTACTLQHLTTKTIIPTPNFHVLY
SSLRPVFLFVLRSWPIPSVALEKHLLPCQMPRQFGRPKGERGGCPRGSSL
NSETSRGVVSALPEPAPAGEHHLVTDARTKWNAAVLRCSDTVFSALYGRG
GATEGKAKGGDEPRDS*
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