prot_Ecto-sp9_F_contig894.17125.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig894.17125.1
Unique Nameprot_Ecto-sp9_F_contig894.17125.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp9_F_contig894.17125.1 vs.
Match: Monogalactosyldiacylglycerol (synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH03_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.580e-19
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0 
Query:   57 MAKKE-GNGSAANRATKRRRDSSASVALLVSAALLSLVRCSEAFVLVPPAAHRAFTTA 113
            MAKKE GNGSAANRATKRRRDSSASVALL SAALLSLVRCSEAFVLVPPAAHRAFT A
Sbjct:    1 MAKKEEGNGSAANRATKRRRDSSASVALLASAALLSLVRCSEAFVLVPPAAHRAFTIA 58
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig894.17125.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Monogalactosyldiacylglycerol1.580e-1994.83synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..102
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig894contigEcto-sp9_F_contig894:5000..5642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig894.17125.1mRNA_Ecto-sp9_F_contig894.17125.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig894 4999..5642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig894.17125.1 ID=prot_Ecto-sp9_F_contig894.17125.1|Name=mRNA_Ecto-sp9_F_contig894.17125.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=113bp
SYCRERNPEEACKPCTNLVPGSEGALSESSRGAHHPRPRTPYLCRAATAA
VVALIKMAKKEGNGSAANRATKRRRDSSASVALLVSAALLSLVRCSEAFV
LVPPAAHRAFTTA
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