prot_Ecto-sp9_F_contig8937.17122.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8937.17122.1
Unique Nameprot_Ecto-sp9_F_contig8937.17122.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8937.17122.1 vs.
Match: Deubiquitinating (enzyme A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK1_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.830e-46
Identity = 110/150 (73.33%), Postives = 111/150 (74.00%), Query Frame = 0 
Query:    1 AALKLVLAAEQGGDTSSSSGSGSRHGAG----VSAAEGRPADGGGTASADGLPAPTADPPPLQEMRVHAVAATTKEAGGGAEGLPAAVPRRVGGGSGRIRRFFCGEE-----PAVESATAAAPRPDYPAKKTTATNGLQSAAEERSAEAM 141
            AALKL LAAEQGGDTS      SRHGAG    VSAAEGRPADGGGTASAD LPAPT DPPPLQEMRVHAVAAT K  GGGAEGLPAAVPR                      PAVESATAAAPRPD PAK+TTATNGLQSAAEERSAEAM
Sbjct:  104 AALKLALAAEQGGDTSXXXXXXSRHGAGAGAGVSAAEGRPADGGGTASADVLPAPTGDPPPLQEMRVHAVAATKKAVGGGAEGLPAAVPRXXXXXXXXXXXXXXXXXXXXXXPAVESATAAAPRPDCPAKETTATNGLQSAAEERSAEAM 253
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BLAST of mRNA_Ecto-sp9_F_contig8937.17122.1 vs.
Match: Deubiquitinating (enzyme A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 9.050e-25
Identity = 74/114 (64.91%), Postives = 75/114 (65.79%), Query Frame = 0 
Query:   29 VSAAEGRPADGGGTASADGLPAPTADPPPLQEMRVHAVAATTKEAGGGAEGLPAAVPRRVGGGSGRIRRFFCGEEPAVESATAAAPRPDYPAKKTTATNGLQSAAEERSAEAMA 142
            VSAAE RPADGG TASADGLPAPTADPPPLQEMRV A AAT K                              EEPAVESATAAAPRPD PAK+T  TNGLQSAAEER AEAMA
Sbjct:  563 VSAAEDRPADGGATASADGLPAPTADPPPLQEMRVQAEAAT-KAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPAVESATAAAPRPDCPAKETMTTNGLQSAAEERGAEAMA 675
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8937.17122.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Deubiquitinating1.830e-4673.33enzyme A n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Deubiquitinating9.050e-2564.91enzyme A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8937contigEcto-sp9_F_contig8937:2675..3112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8937.17122.1mRNA_Ecto-sp9_F_contig8937.17122.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8937 2675..3112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8937.17122.1 ID=prot_Ecto-sp9_F_contig8937.17122.1|Name=mRNA_Ecto-sp9_F_contig8937.17122.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=146bp
AALKLVLAAEQGGDTSSSSGSGSRHGAGVSAAEGRPADGGGTASADGLPA
PTADPPPLQEMRVHAVAATTKEAGGGAEGLPAAVPRRVGGGSGRIRRFFC
GEEPAVESATAAAPRPDYPAKKTTATNGLQSAAEERSAEAMAAAAG
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