prot_Ecto-sp9_F_contig8753.16936.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8753.16936.1
Unique Nameprot_Ecto-sp9_F_contig8753.16936.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length261
Homology
BLAST of mRNA_Ecto-sp9_F_contig8753.16936.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL70_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 8.830e-102
Identity = 200/261 (76.63%), Postives = 212/261 (81.23%), Query Frame = 0
Query:    4 PRFPSLQVFSPNQLYRKGMVFWEMFRPYVAFLKEVDAITSWGQPRRRCV-LCVSLYFHVYVCQEGGXXXXXXXXXXTEVSMSMSMRSTS--HSQRKGSTTLFSLSRTLIRGNRGAPIRRRVSDPDPATANAVGSATAGVALRNSSSAPSRTALWRANAPRSAPPSTITTPTTMARTSIFAASSGAPQSPFTPRDLSISNAAATSSNAVNARLGVGAGVSRDVVHAAEVAKGGMISAAGAGSKKIKKLLPVRGTRDPEVSEL 261
            P  P   VFSPNQLYRKGMVFWEMFRPYV FLKEVDAI+SWG+PR+R   +  +      V QEGGXXXXXXXXXX ++SM           SQRK STT FSLSR+LIRGNRGAPIRRRVSDPDP TANAVGSA+AGVALRNSSSAPSRTA WRA APRSAPPSTITTPTTMARTSIFAASSGA Q P TPR LSISNAAA  SN      GVG+GVSRDVVHAA VAKGG+ISAAGAGSKKIKKLLPVRGTRDPE+ EL
Sbjct:  257 PLKPPKIVFSPNQLYRKGMVFWEMFRPYVTFLKEVDAISSWGRPRKRQGGVFGARRIRFDVGQEGGXXXXXXXXXXXQLSMXXXXXXXXXXRSQRKSSTTFFSLSRSLIRGNRGAPIRRRVSDPDPVTANAVGSASAGVALRNSSSAPSRTAPWRAKAPRSAPPSTITTPTTMARTSIFAASSGASQPPSTPRALSISNAAAIDSNNSYTGPGVGSGVSRDVVHAAGVAKGGVISAAGAGSKKIKKLLPVRGTRDPELREL 517          
BLAST of mRNA_Ecto-sp9_F_contig8753.16936.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 1.840e-80
Identity = 194/393 (49.36%), Postives = 203/393 (51.65%), Query Frame = 0
Query:    4 PRFPSLQVFSPNQLYRKGMVFWEMFRPYVAFLKEVDAITSWGQPRRRCV-------------------------LCVSLYFHVYVC--------------------------------------------------------QEGGXXXXXXXXXXTE------------------------------------------------------VSMSMSMRSTSHSQRKGSTTLFSLSRTLIRGNRGAPIRRRVSDPDPATANAVGSATAGVALRNSSSAPSRTALWRANAPRSAPPSTITTPTTMARTSIFAASSGAPQSPFTPRDLSISNAAATSSNAVNARLGVGAGVSRDVVHAAEVAKGGMISAAGAGSKKIKKLLPVRGTRDPEVSEL 261
            P  P   VFSPNQLYRKGMVFWEMF+PYV FLKEVDAI SWG+PRR  +                         + VS Y                                                              + GG          T                                                          SMSMRSTS SQRK STTLFSLSRTL RG       RRVSDPDP TAN VGS+TAGVALRNSSSAPSRTA WRA APRSAPPST+T PTTMARTSIFAASSGAPQSPFTPRDLSISNAA +SSN VN   GVGAGVSRDVVHAA VAKGGMISAAGAGSKKIKKLLPV GTRDPE+ EL
Sbjct:  257 PLKPPKIVFSPNQLYRKGMVFWEMFKPYVTFLKEVDAINSWGRPRRSLMWMLAVVGMLVVPPVLIVVVNVALMHIAVSAYLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAPASTDPTSNDPSPSSLVTAPAVTDERSGGQEEGLSSLLGTPWLGDNAGTGGGSRRQSLFFLPAFASSPVSPARVGXXXXXXXXXXXXXXXXXXXXXEPSMSMRSTSRSQRKSSTTLFSLSRTLTRG-------RRVSDPDPVTANTVGSSTAGVALRNSSSAPSRTAPWRAKAPRSAPPSTMTMPTTMARTSIFAASSGAPQSPFTPRDLSISNAAGSSSNNVNTGPGVGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPVWGTRDPELREL 642          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8753.16936.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.830e-10276.63protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
C21.840e-8049.36domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8753contigEcto-sp9_F_contig8753:81..4633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8753.16936.1mRNA_Ecto-sp9_F_contig8753.16936.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8753 81..4633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8753.16936.1 ID=prot_Ecto-sp9_F_contig8753.16936.1|Name=mRNA_Ecto-sp9_F_contig8753.16936.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=261bp
PPPPRFPSLQVFSPNQLYRKGMVFWEMFRPYVAFLKEVDAITSWGQPRRR
CVLCVSLYFHVYVCQEGGGGGGGGGEETTEVSMSMSMRSTSHSQRKGSTT
LFSLSRTLIRGNRGAPIRRRVSDPDPATANAVGSATAGVALRNSSSAPSR
TALWRANAPRSAPPSTITTPTTMARTSIFAASSGAPQSPFTPRDLSISNA
AATSSNAVNARLGVGAGVSRDVVHAAEVAKGGMISAAGAGSKKIKKLLPV
RGTRDPEVSEL
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