prot_Ecto-sp9_F_contig8610.16790.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8610.16790.1
Unique Nameprot_Ecto-sp9_F_contig8610.16790.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length551
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8610.16790.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH88_ECTSI)

HSP 1 Score: 607 bits (1564), Expect = 4.030e-209
Identity = 496/551 (90.02%), Postives = 498/551 (90.38%), Query Frame = 0 
Query:    1 MGKKNVPLLLVLTLSCSESGLSFLRPHISSLPHLSQAPSAKTSVTRRQAAATIPGGVPSGKLERGAPASKTSDQSPFPNQSPPPXXQSVNPTEATPGSTAVTGGSATQVKGKGASGTPKTAAAGKATAASKGTVGPSAVSPKAAVAAGTTQGSAAAVGGAAGAKAGGTAVAAVEEKTAVSAKEREEVTATDKPTEDKKKGLKAGPETTAAEKVLTLVEIGLVDKEEASTYYEALSDLERTTQEAKAXXXXXXXXXXXAARSSSASPFSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGALGTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVTALPGAVVTKAADGAKGALQDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDAVSSPGKTLTALASGASSLVAQQIESSKKKARPAASAASTXXXXXXXTAATSVEEKQEPEGIPIDELEAKMLSVRKALERFDTVK 551
            MGKKNVPLLLVLTLSCSESGLSFLRPH+SSLPHLSQAPSAKTSVTRRQAAATIPGGVPSGKLERGAP SKTSDQSPFPNQSPPPXX SVNPTEATPGS       ATQVKGKGASGTPKTAAAGKA AASKGTVGPSAVSPKAAVAAGTTQGS                        AVSAKEREEVTATDKPTEDKKKGLKAGPETTAAEKVLTLVEIGLVDKEEASTYYEALSDLERTTQEAKAXXXXXXXXXXX     SASPFSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGALGTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVTALPGAV TKAADGA+GALQDTS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDAVSSPGKTLTALASGASSLVAQQIESSKKKARPAA AAST       TAA SVEEKQEPEGIPIDELEAKM SVRKALERFDTVK
Sbjct:    1 MGKKNVPLLLVLTLSCSESGLSFLRPHVSSLPHLSQAPSAKTSVTRRQAAATIPGGVPSGKLERGAPTSKTSDQSPFPNQSPPPXXXSVNPTEATPGSXXXXXXXATQVKGKGASGTPKTAAAGKAAAASKGTVGPSAVSPKAAVAAGTTQGSXXXXXXXXXXXXXXXXXXXXXXXXAVSAKEREEVTATDKPTEDKKKGLKAGPETTAAEKVLTLVEIGLVDKEEASTYYEALSDLERTTQEAKAXXXXXXXXXXXXXXXXSASPFSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGALGTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTALPGAVATKAADGARGALQDTSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDAVSSPGKTLTALASGASSLVAQQIESSKKKARPAAPAASTKKAPQASTAAASVEEKQEPEGIPIDELEAKMSSVRKALERFDTVK 551
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8610.16790.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized4.030e-20990.02protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH88... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..551
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8610contigEcto-sp9_F_contig8610:145..2805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8610.16790.1mRNA_Ecto-sp9_F_contig8610.16790.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8610 145..2805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8610.16790.1 ID=prot_Ecto-sp9_F_contig8610.16790.1|Name=mRNA_Ecto-sp9_F_contig8610.16790.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=551bp
MGKKNVPLLLVLTLSCSESGLSFLRPHISSLPHLSQAPSAKTSVTRRQAA
ATIPGGVPSGKLERGAPASKTSDQSPFPNQSPPPPPQSVNPTEATPGSTA
VTGGSATQVKGKGASGTPKTAAAGKATAASKGTVGPSAVSPKAAVAAGTT
QGSAAAVGGAAGAKAGGTAVAAVEEKTAVSAKEREEVTATDKPTEDKKKG
LKAGPETTAAEKVLTLVEIGLVDKEEASTYYEALSDLERTTQEAKAAAAA
AAESQPSAARSSSASPFSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGAL
GTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGGAAGK
SVSESAAGAAGAAVGAVEEAVVKAPANFVAGVASSISSAVSSAVGSVTAL
PGAVVTKAADGAKGALQDTSEAVVNLPGEVARKAAQAAGGALQSTSDAAV
TAVRESPKVAAKRLNDAVSSPGKTLTALASGASSLVAQQIESSKKKARPA
ASAASTKKAPQASTAATSVEEKQEPEGIPIDELEAKMLSVRKALERFDTV
K
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