prot_Ecto-sp9_F_contig11720.1436.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11720.1436.1
Unique Nameprot_Ecto-sp9_F_contig11720.1436.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length238
Homology
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: RING-type (E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL2_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 5.390e-129
Identity = 208/231 (90.04%), Postives = 210/231 (90.91%), Query Frame = 0
Query:    1 TRQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            T++DVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGK                     KGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ
Sbjct:  150 TKRDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGK---------------------KGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 359          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: PPIase (cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW48_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.240e-52
Identity = 97/118 (82.20%), Postives = 97/118 (82.20%), Query Frame = 0
Query:  114 MTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            MTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGK                     KGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ
Sbjct:    1 MTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGK---------------------KGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 97          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: RING-type (E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG8_9STRA)

HSP 1 Score: 178 bits (452), Expect = 8.440e-50
Identity = 106/230 (46.09%), Postives = 140/230 (60.87%), Query Frame = 0
Query:    2 RQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            R D+IKLNDP D+   A RD NNF HL E+RE       + +H  KIRQT +T+ IF+EI  KR+ D  ++             ++   +AAG  LWKR +V  ED+  G  +T+   +GSFTS+A  VST +++R AT +EI+ AR+ RLR L K                     KGY QLQT+ GNIN+E+H D+VP+ AENFLGLCEK YYDGT FHRSIR+F++Q
Sbjct:  151 RADIIKLNDPADEALCALRDANNFKHLKELREAEAKRQEQASHTSKIRQTLTTQQIFKEIEEKRQSDERDRTXXXXXXXXXXXXKDAEAVAAGAPLWKRLRVLLEDISEGTHVTTNVMAGSFTSTAQQVSTTAQSREATPEEIDRARFSRLRALKK---------------------KGYVQLQTSHGNINIEVHVDMVPKTAENFLGLCEKGYYDGTIFHRSIRHFVIQ 359          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: RING-type (E3 ubiquitin transferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5H9_AURAN)

HSP 1 Score: 145 bits (365), Expect = 1.350e-36
Identity = 107/264 (40.53%), Postives = 139/264 (52.65%), Query Frame = 0
Query:    2 RQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKA--AKDEEDR-----------------------KTAKEREEA--------GLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQV 232
            + D++ ++DP D    A RD+ NF HL E RE R A LA     D IR + S+  +  E  AKR   AAE+A  AK+  +R                       + AK   +A        GL       +    TT++++ G  +TSG TSGSFTSSAL+V T +K R AT+DE+  ARW RLR LGK                     KGY QL+T+ GN+NVEIH D+VPR AENFLGLC K YYDG+ FHR +R+F+ Q 
Sbjct:  152 KADLVMIHDPEDAALCARRDLANFAHLREEREAREARLATSRPEDHIRTSDSSRAVLDE--AKRNVAAAEEARSAKEAANRAAKGGNRPRYEPLKLGISHPFAAQAAKRLADADPDLPRNKGLTEAFLRVRTLGATTDEILKGSKLTSGATSGSFTSSALSVETSAKLRDATEDELKTARWKRLRGLGK---------------------KGYAQLRTSHGNLNVEIHADMVPRAAENFLGLCAKGYYDGSPFHRVVRHFVAQA 392          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: RING-type (E3 ubiquitin transferase (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A007_9STRA)

HSP 1 Score: 140 bits (352), Expect = 9.830e-35
Identity = 102/243 (41.98%), Postives = 139/243 (57.20%), Query Frame = 0
Query:    2 RQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKE--REEAGLAAGERLWKRGKV-----------TTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            ++DVI L+DP DK+ V+ RD+ NF HL E R++R AEL         +QT +     +E+ A+ KR+  E+ A+     + AKE  R+EA L A +R   RG             TT+++  G  +TSG TSGSFTSSA+  ST +  R ATDDE+  ARW  LR LG+                     KGY +++T+ G++NVEIHCD+VPR AENFLGLC    YD T FHR +R+F+ Q
Sbjct:  247 KEDVISLHDPDDKDLVSRRDLANFWHLQEERKKRDAELGSKGS---FKQTDAQ----KEVLAEAKRNVQEREAQ-----RLAKEKARQEA-LNAPDRPENRGLTEAYLRVRQLGATTDEVTPGSKLTSGATSGSFTSSAMDRSTTAALRAATDDELKTARWKVLRSLGQ---------------------KGYARIRTSLGDLNVEIHCDMVPRAAENFLGLCRDGKYDETLFHRVVRHFVAQ 455          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: RING-type (E3 ubiquitin transferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7R4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.160e-34
Identity = 91/247 (36.84%), Postives = 130/247 (52.63%), Query Frame = 0
Query:    1 TRQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKI----RQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERL---------WKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQVRC 234
            TR+D+I L DP +   +A RD++NF HL EVR E  A +A  +  +KI    R   STE++  E   +++     +A +  +      ERE         L          +R  +  EDL  G+ +T+GK + SFT++ + ++T +  R AT++E  + R+   RKLGK                     KGY QLQT+ GN+N+EIHCD VPR AENFLGLC + +YDG  FHR I+ FM Q  C
Sbjct:  150 TRKDIITLQDPSNAAHMALRDISNFKHLEEVRAEEQARVAGASAEEKIASSIRTNASTEMVLAEFQRQQRERXXXEALRAAQAEAXXVEREXXXAXXXXXLRXXXXXXXXXRRRSILIEDLHPGKSVTTGKAAASFTATGVDLATGNTCRTATEEETREVRYKFARKLGK---------------------KGYVQLQTSLGNLNLEIHCDFVPRTAENFLGLCLRGFYDGLSFHRVIKGFMAQTGC 375          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RH75_THAOC)

HSP 1 Score: 125 bits (314), Expect = 1.630e-29
Identity = 85/238 (35.71%), Postives = 135/238 (56.72%), Query Frame = 0
Query:    1 TRQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHAD-KIRQTKSTELIFREIGA-KRKRDAA-----EKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            ++ DVI LNDP DK+    RD+ NF H   +REE   + +  + +   ++   + + I +++   KRKR+ A     +K  K EED   +K+   +G +  +      K+  ++L+  + MTSGK SGS TS+A+ +  E+ ARLAT+DEI D++  +L++L K                     KG  ++ T +GN+++ +HCDIVPR A NF+ L  +  YDG+KFHRSI+NFM+Q
Sbjct:  156 SKDDVIVLNDPDDKDLQRMRDIQNFCHTKAMREENDRKQSSASGSQANVKYNLTADRILQKLDKEKRKREKASEEQAKKLLKTEEDEDVSKK---SGYSTKDL-----KIYADELISAKHMTSGKASGSLTSTAMDIQRENTARLATEDEIVDSQVEQLKRLKK---------------------KGTVRMYTNRGNMDISVHCDIVPRTALNFMLLAHQGEYDGSKFHRSIKNFMIQ 364          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQ04_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.550e-29
Identity = 91/236 (38.56%), Postives = 127/236 (53.81%), Query Frame = 0
Query:    2 RQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHAD-KIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKE----REEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQV 232
            + DV+ L DP + E +A RD+NNF HL  VREE     +K    + KIRQ+ ST  + +EI ++R+ +  E   K    RKT +E    +     +  ER     +  T D+  G++ T G+ S S TS++  + T +  R AT +EI +ARW  +R++GK                     KGY QLQTT GN+NVEIHCDI PR A NFL LCE+ Y+D    HR +  FM+Q 
Sbjct:  143 KSDVLTLQDPQNAEQMAKRDINNFSHLKTVREES----SKTREGESKIRQSLSTSNVMKEIESQRQLEK-ESGVK----RKTLEEIISNKSTEDNSDVERFLAL-QALTLDVTPGQVSTDGRASSSLTSTSSNLWTSNATRRATAEEIREARWKIMRQVGK---------------------KGYAQLQTTHGNLNVEIHCDIAPRTAWNFLTLCERGYFDDMTLHRLVPGFMVQA 347          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBR0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 7.310e-25
Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 0
Query:  102 KVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKA-RLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            K T ++L  G   TSG  SGSFTSS +AV+T+SK  R A+ +EI  ARW   R +GKKA                     Y QLQT++GN+NVE++ ++VP+ AENFLGLC K+YYDG  FHR I+ FM+Q
Sbjct:   62 KPTQDELHPGSGETSGTASGSFTSSGVAVATDSKKMRQASVEEIRLARWRLCRSIGKKA---------------------YVQLQTSQGNLNVEVYANMVPQTAENFLGLCGKKYYDGLSFHRLIKGFMVQ 171          
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSR9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.420e-24
Identity = 82/235 (34.89%), Postives = 124/235 (52.77%), Query Frame = 0
Query:    4 DVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELA-------KVAHADKIRQTKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKRGKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQ 231
            DVI L DP D+E    RD++NFVH   +R++   + A       K+   D +R + +   I  +I  KR++D  E       D+K  K +  A         K+ K+ T +L G   MTSG+ SGSFTS+++ +S  +  R AT +EI  + +Y +++                      + KG+    T+ G+++VEIH DIVP+ A NFLGL +++ YDG  FHRSIRNFM+Q
Sbjct:  162 DVIILQDPNDEEQQRLRDISNFVHTQTMRKQEETKNAAAAVDPNKLVSGD-VRHSVTASRIMDQIKKKREQDELE-------DQKR-KRKMAASTITSTNETKKPKIYTNELQGFGNMTSGQCSGSFTSTSMNISNTNAIREATQEEILQSLFYMMKRR---------------------KQKGFVHFITSLGDVDVEIHADIVPKTAMNFLGLVDQKAYDGCIFHRSIRNFMIQ 366          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11720.1436.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RING-type5.390e-12990.04E3 ubiquitin transferase n=1 Tax=Ectocarpus silicu... [more]
PPIase2.240e-5282.20cyclophilin-type domain-containing protein n=1 Tax... [more]
RING-type8.440e-5046.09E3 ubiquitin transferase n=1 Tax=Tribonema minus T... [more]
RING-type1.350e-3640.53E3 ubiquitin transferase n=1 Tax=Aureococcus anoph... [more]
RING-type9.830e-3541.98E3 ubiquitin transferase (Fragment) n=3 Tax=Pelago... [more]
RING-type7.160e-3436.84E3 ubiquitin transferase n=2 Tax=Monodopsidaceae T... [more]
Uncharacterized1.630e-2935.71protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
Hypothetical3.550e-2938.56protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Peptidyl-prolyl7.310e-2548.09cis-trans isomerase (Fragment) n=1 Tax=Dictyocha s... [more]
Hypothetical3.420e-2434.89protein (Fragment) n=1 Tax=Ditylum brightwellii Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..87
NoneNo IPR availablePANTHERPTHR45625FAMILY NOT NAMEDcoord: 1..231
NoneNo IPR availablePANTHERPTHR45625:SF1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 2coord: 1..231
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 160..235
e-value: 6.9E-20
score: 73.6
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 181..233
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 182..232
e-value: 7.3E-14
score: 52.3
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 189..231
score: 9.606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11720contigEcto-sp9_F_contig11720:441..3266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11720.1436.1mRNA_Ecto-sp9_F_contig11720.1436.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11720 441..3266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11720.1436.1 ID=prot_Ecto-sp9_F_contig11720.1436.1|Name=mRNA_Ecto-sp9_F_contig11720.1436.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp
TRQDVIKLNDPGDKEFVASRDVNNFVHLSEVREERVAELAKVAHADKIRQ
TKSTELIFREIGAKRKRDAAEKAAKDEEDRKTAKEREEAGLAAGERLWKR
GKVTTEDLVGGRIMTSGKTSGSFTSSALAVSTESKARLATDDEINDARWY
RLRKLGKKARRRITETAFRLQQRQGIRSKGYCQLQTTKGNINVEIHCDIV
PRMAENFLGLCEKEYYDGTKFHRSIRNFMLQVRCLCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029000Cyclophilin-like_dom_sf
IPR002130Cyclophilin-type_PPIase_dom