prot_Ecto-sp9_F_contig115.1270.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig115.1270.1
Unique Nameprot_Ecto-sp9_F_contig115.1270.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length351
Homology
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BLAST of mRNA_Ecto-sp9_F_contig115.1270.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYV8_ECTSI)

HSP 1 Score: 614 bits (1583), Expect = 1.160e-220
Identity = 335/350 (95.71%), Postives = 337/350 (96.29%), Query Frame = 0 
Query:    1 MPCDRSAGHRLACAAWGAGVLLAAAAVAPRAVGFRATAVPPTRLTACRSHGGGIGHEKGSPKRQHALVASARAWRGRDRWVLRSGQAESLGKEEEGAVGSMTSDEANNWGMDDSIDVNAIRMKLMEKAGYTKREDSDAGEEWITVDEDGTDETMDRMKDAVAESLRNELLGQDSLNEADASALVEEVLQDTDLAKFFDEEFEKGTSALRKLAEELKTDEGAVSYADRMAQELAELLQAEEDKAAAEIERRQAPVKAXXXXXXXXXXXXXXAAEEARREFEGDFVLQLMSFRQKGVLRQAAFVGAVLIANQAVYQAILVADDRGGNPAFALGGLAASAALVWYYGYRPLKR 350
            MPCDRSAG RLACAAWGAGVLLAAAAVAPRAVGFRATAVPPTRLTACRSHGGG+GHEKG PKR HAL ASARAWRGRDRWVLRSGQAESLGKEEEGAVGSMTSDEANNWGMDDSIDVNAIRMKLMEKAGYTKREDSDAGEEWITVDEDGTDETMDRMKDAVAESLRNELLGQDSLNEADASALVEEVLQDTDLAKFFDEEFEKGTSALR+LAEELKTDEGAVSYADRMAQELAELLQ EEDKAAAEIERRQAPVKA      XXXXXX  AAEEARREFEGDFVLQLMSFRQKGVLRQAAFVGAVLIANQAVYQAILVADDRGGNPAFALGGLAASAALVWYYGYRPLKR
Sbjct:    1 MPCDRSAGLRLACAAWGAGVLLAAAAVAPRAVGFRATAVPPTRLTACRSHGGGVGHEKGFPKRHHALRASARAWRGRDRWVLRSGQAESLGKEEEGAVGSMTSDEANNWGMDDSIDVNAIRMKLMEKAGYTKREDSDAGEEWITVDEDGTDETMDRMKDAVAESLRNELLGQDSLNEADASALVEEVLQDTDLAKFFDEEFEKGTSALRELAEELKTDEGAVSYADRMAQELAELLQVEEDKAAAEIERRQAPVKAKLDKATXXXXXXVAAAEEARREFEGDFVLQLMSFRQKGVLRQAAFVGAVLIANQAVYQAILVADDRGGNPAFALGGLAASAALVWYYGYRPLKR 350
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BLAST of mRNA_Ecto-sp9_F_contig115.1270.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 8.970e-14
Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 0 
Query:  193 LAKFFDEEFEKGTSALRKLAEELKTDEGAVSYADRMAQELAELLQAEEDKAAAEIERRQAPVKAXXXXXXXXXXXXXXAAEEARREFEGDFVLQLMSFRQKGVLRQAAFVGAVLIANQAVYQAILVADDRGGNPAFALGGLAASAALVWYYGYR 346
            L+ F D+E  +G   LR LA++L + +GA       A+  +   + + +K   + E +   +                  ++ +   E D+V QL SF  KGV++Q+A V A+L+ANQA YQA+L+ + RGG P  A   LA  AA +++YG R
Sbjct:  171 LSSFLDDELNRGEEELRSLAQDLVSKDGAPGE-QFFAEAFSSAYEEQTEKMLGQYESKAGKIMQRVEREKANLEREVENMKDLQASVEKDWVFQLQSFPTKGVVKQSALVSAILLANQAAYQALLIVERRGGEPVTAALELALVAAALYFYGLR 323
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig115.1270.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.160e-22095.71protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYV8... [more]
Uncharacterized8.970e-1432.47protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 255..282
NoneNo IPR availableCOILSCoilCoilcoord: 228..249
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..326
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 346..350
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..345
NoneNo IPR availableTMHMMTMhelixcoord: 15..34
NoneNo IPR availableTMHMMTMhelixcoord: 327..345
NoneNo IPR availableTMHMMTMhelixcoord: 295..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig115contigEcto-sp9_F_contig115:29218..34106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig115.1270.1mRNA_Ecto-sp9_F_contig115.1270.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig115 29078..34638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig115.1270.1 ID=prot_Ecto-sp9_F_contig115.1270.1|Name=mRNA_Ecto-sp9_F_contig115.1270.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=351bp
MPCDRSAGHRLACAAWGAGVLLAAAAVAPRAVGFRATAVPPTRLTACRSH
GGGIGHEKGSPKRQHALVASARAWRGRDRWVLRSGQAESLGKEEEGAVGS
MTSDEANNWGMDDSIDVNAIRMKLMEKAGYTKREDSDAGEEWITVDEDGT
DETMDRMKDAVAESLRNELLGQDSLNEADASALVEEVLQDTDLAKFFDEE
FEKGTSALRKLAEELKTDEGAVSYADRMAQELAELLQAEEDKAAAEIERR
QAPVKAKLDKATAELEEAVAAAEEARREFEGDFVLQLMSFRQKGVLRQAA
FVGAVLIANQAVYQAILVADDRGGNPAFALGGLAASAALVWYYGYRPLKR
*
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