prot_Ecto-sp9_F_contig1125.1078.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1125.1078.1
Unique Nameprot_Ecto-sp9_F_contig1125.1078.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length321
Homology
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI)

HSP 1 Score: 603 bits (1556), Expect = 1.150e-217
Identity = 310/320 (96.88%), Postives = 311/320 (97.19%), Query Frame = 0
Query:    1 MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 320
            MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRS YLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDS QPKIYK       VNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSAL+IVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC
Sbjct:    1 MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSDYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSFQPKIYK-------VNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 313          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 7.750e-159
Identity = 236/320 (73.75%), Postives = 260/320 (81.25%), Query Frame = 0
Query:    1 MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 320
            MR  G LLA    +  + ASSRLDVIDLPTGF PEGIT+G GWTAFVGSL++GNIWKGDL+TG+GEV EL APGPA GL HDRRSGYLFVAG   GT RVYDEDFALVADL   D  +S +NDV++TK AAF+TDS QP IYK       VNLDRETGALVDG +  TLVL DN P +E A N+NGIE TDDGSALI+VN ESQQ++AVDPDTG AT+IDLGG++L  RGDGLVLRKNTLWV DN LEQI EVSL+ADLSCGS+A R LSNPLFD QTTAMRKGNSLYAVNAK  VA ED+ATTAYEIVRVDRD GEL C
Sbjct:   23 MRVSGGLLAT--LVTVTSASSRLDVIDLPTGFSPEGITSGGGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTSIINDVVVTKGAAFYTDSFQPHIYK-------VNLDRETGALVDGSSFETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELAC 333          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN98_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 5.930e-101
Identity = 188/321 (58.57%), Postives = 201/321 (62.62%), Query Frame = 0
Query:    1 MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLALSDG-NSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 320
            MR FGV+LA+S  IIAS ASS+LDVIDLP GFFPEGITNGEGWTAFVGSL                                              TARVYDEDF +VADLAL+DG NSSFVNDVIITKTAAFFTDS QPKIYK       V+LD ETG LVD  AV TLVLSDNVPV+EGAFNVNGIE                                             VLRKNTLWVV  +  +ILEVSL+ADLSCGS+A RALS+P+FDTQTTAMRKGNSLYAVNAKFGVA EDV T AYEIVRVDRDSGEL C
Sbjct:    1 MRSFGVVLASSVMIIAS-ASSKLDVIDLPRGFFPEGITNGEGWTAFVGSLKR--------------------------------------------TARVYDEDFTMVADLALADGGNSSFVNDVIITKTAAFFTDSFQPKIYK-------VDLDEETGELVDRSAVETLVLSDNVPVVEGAFNVNGIE---------------------------------------------VLRKNTLWVVHPSGGEILEVSLSADLSCGSVARRALSHPMFDTQTTAMRKGNSLYAVNAKFGVAEEDVDTAAYEIVRVDRDSGELAC 224          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L833_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 2.510e-91
Identity = 158/270 (58.52%), Postives = 179/270 (66.30%), Query Frame = 0
Query:   53 GNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEV--SLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 320
            GN WK DL+TG+G V EL APGPA GL HDRRSGYLFVAG   GT RVYDEDFALVADLA  D  +S +NDV++TKTAAF+TDS  P I K                                              TD+ S LI+VN ESQQ++AVDPDTG AT++DLGG++L  RGDGLVLRK+TL V DN LE+I EV  SL+ADLSCGS+A R LSNPLFD QTTAM KGNS+YAVNA   VA E + TTAYEIVRV RD GEL C
Sbjct:   35 GNNWKDDLKTGEGGVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLAFGDVGTSMINDVVVTKTAAFYTDSIHPHINKV---------------------------------------------TDNDSPLIVVNSESQQVYAVDPDTGDATVVDLGGDVLGPRGDGLVLRKDTL-VSDNVLEKIYEVQVSLSADLSCGSVATRTLSNPLFDRQTTAMPKGNSMYAVNANLDVAEEVITTTAYEIVRVHRDGGELAC 258          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM39_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 6.480e-81
Identity = 134/175 (76.57%), Postives = 136/175 (77.71%), Query Frame = 0
Query:   52 NGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPP-----------------------------------VNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATD 191
            NGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADL LSDGNSSFVNDVIITKTAA+FTDS QPKIYKARQLRP                                    VNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIE +D
Sbjct:    6 NGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLVLSDGNSSFVNDVIITKTAAYFTDSFQPKIYKARQLRPSLNEFRPREWGHSMSSRQHPVLQFEQVSTVSIEEKNVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEVSD 180          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.550e-80
Identity = 158/328 (48.17%), Postives = 207/328 (63.11%), Query Frame = 0
Query:   11 SWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGP-AVGLDHDRRSGYLFVAGGPVGTARVYD--EDFALVADLALSDGNSSFVNDVIITKTA--AFFTDSSQPKIYKARQLRPPVNLDRETGALVDG--LAVHTLVLSDNVPVLEG------AFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNAL-----EQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 320
            S AI+ +  + RLD+IDLP GF PEG+T G G   +V +   G+IWKGDLETG G V   G  G  A+G+D DRRS YL+V G   G+  +YD  +DF+LVA++ L    +S VNDVII   +  A+ T+SSQ + Y+       + LD E G L +G       + LS +     G      A N NGI  TDD S+LIIVN +S +LFAVDPDTG ATLIDLGG+L+ G GDGLVLRKNTLWV  N L     + ++EV L+ DLSCG++  R LSN  F+   TA+RKGNS++   + + V+ E++ATT Y++VRVDRDS    C
Sbjct:    9 SLAIVPAVLAGRLDLIDLPVGFQPEGVTLGHGQEVYVSAFTGGSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDTTDDFSLVAEIQLGTVGASLVNDVIIHPRSEYAYITESSQLQFYR-------IALD-EYGRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLILG-GDGLVLRKNTLWVCQNRLFGTPDQGVVEVLLSEDLSCGTIT-RRLSNEFFNDPATALRKGNSMWTTISMWAVSGEEIATTQYQLVRVDRDSAVSEC 326          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY)

HSP 1 Score: 237 bits (604), Expect = 5.130e-73
Identity = 147/299 (49.16%), Postives = 184/299 (61.54%), Query Frame = 0
Query:   16 ASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDF-ALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDR 313
            A+  S+   VI LP GF PEGI  G G   FVGSL  G I++GDL TG G+VF     GPAVGL HD RS YLFVAGGP G A VYD D  ALVAD  L D  S FVNDV++T+TAA+FTDS++P +Y     R P+      G + +  AV  + LS +   + G FN NGI+A  +G  LI+VN  +  L+ VDP +G AT IDLGGE +   GDG++L   TL+VV N L QI  V+L  D + G +    ++NPLFD  TT    GNSLYAVNA+FG      A   Y++VRV +
Sbjct:   35 AAAKSAFPAVIPLPIGFQPEGIVTGLGTDFFVGSLAGGAIYRGDLRTGSGDVFVPPTGGPAVGLSHDARSNYLFVAGGPTGRASVYDADTGALVADYELQD--SQFVNDVVVTRTAAYFTDSARPSLY-----RIPLGAG---GDVPNQSAVEEIPLSGDFTSVAG-FNANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETVTA-GDGILLAGRTLYVVRNQLNQIAVVTLDPDATAGEVVD-VITNPLFDVPTTVTGFGNSLYAVNARFGTPP---ANAEYDVVRVSK 317          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=3 Tax=Haloferacaceae TaxID=1644056 RepID=A0A6A8G917_9EURY)

HSP 1 Score: 226 bits (575), Expect = 7.730e-69
Identity = 146/300 (48.67%), Postives = 181/300 (60.33%), Query Frame = 0
Query:   16 ASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGP-AVGLDHDRRSGYLFVAGGPVGTARVYDEDF-ALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDR 313
            AS A++   VI LPTGF PEGI  G G   FVGSL  G I++GDL TG GEVF     G  AVGL HD RS YLFVAGGP G A VYD +  ALVAD  L  G  +FVNDV++T+TAA+FTDS +P +Y     R P+      G + D  AV  + LS +   + G FN NGI+A  +G  LI+VN  +  L+ VDP TG AT IDLGG  L   GDG++L   TL+VV N L  I  V L  + + G +    +++P FD  TT    GNSLYAVNA+FG    D A   Y++VRV +
Sbjct:   18 ASAAAAYPSVIPLPTGFRPEGIVTGLGNEFFVGSLAAGAIYRGDLRTGSGEVFVPPVEGGVAVGLSHDARSNYLFVAGGPTGQASVYDANTGALVADYGLQ-GPPTFVNDVVVTRTAAYFTDSFRPALY-----RVPLGAG---GDVPDQSAVEEIPLSGDFTSV-GGFNANGIDAPPNGEYLIVVNSSTGLLYKVDPATGDATEIDLGGASLTA-GDGILLEGRTLYVVRNQLNLIAVVQLDPEATAGEVVDE-ITDPQFDVPTTVAGFGNSLYAVNARFGTP--DPANAEYDVVRVSK 303          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR)

HSP 1 Score: 221 bits (562), Expect = 7.160e-67
Identity = 147/310 (47.42%), Postives = 186/310 (60.00%), Query Frame = 0
Query:    6 VLLAASWAIIASEASSRL--DVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLALS-DGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVA-AEDVATTAYEIVRV 311
            +LL      +AS A+++   +VI LP GF PEGI  GEG TA+ GSL +G+I+  DL TG GE+   G   PAVGLD DRR+GYLFV+GGP G  R+Y+       DL  S D    FVNDVI+T  AA+FTDS  P +YK       V+LD       D     TL LS +   + G FN NGI AT +G+ALIIV+    +L+ VDP TG ATLIDLGGE +   GDGLVL    L+VV N+L QI E  L+ + +  SL  + +++  FD  TTA  +G  LYAVNA+FG     DV    Y+IVRV
Sbjct:   12 ILLTLLTLAVASPAAAQRYPEVIPLPNGFQPEGIVVGEGNTAYAGSLADGDIYTVDLSTGAGEILLEGPGTPAVGLDFDRRTGYLFVSGGPNGDGRIYNTH---TGDLVTSYDFAGGFVNDVIVTPHAAYFTDSFMPVLYK-------VDLDDSGTPGADS----TLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENV-NSGDGLVLVARKLFVVQNSLNQIAEFHLSRNYTAASLR-QIITDDDFDIPTTADNQGARLYAVNARFGTTPGPDVE---YDIVRV 302          
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Match: Superoxide (dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5S5I5_9CHLR)

HSP 1 Score: 216 bits (551), Expect = 4.450e-65
Identity = 140/312 (44.87%), Postives = 187/312 (59.94%), Query Frame = 0
Query:    6 VLLAASWAIIASEASSRL--DVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPG-PAVGLDHDRRSGYLFVAGGPVGTARVYD-EDFALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPPVNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDR 313
            +L+A S+ +I +  + +   +VI LP GF PEGI +G G T +VGS+  G +++GD+ +G+GEV      G  A+GL +D RSG LFV+GG  G A VYD +  A VA++ LS    SF+NDV+ITK AA+FT+S QP  Y+       V+L R  G L        + L  +   +  AFN NGI AT +G ALIIVN     L+ VDP TG A  IDLGG  +P  GDGL+L+  TL+VV N L QI  + L +D + GS+    +++ LF   TT  R GNSLYAVNA+FG        T YE+VRV R
Sbjct:   16 LLIALSFTLIGAAPAHQAFPEVIPLPNGFQPEGIASGRGNTFYVGSIPTGAVYRGDVRSGEGEVLVPAQEGRSAIGLKYDSRSGLLFVSGGNTGFAYVYDGKTGANVAEIQLST-TPSFINDVVITKDAAYFTNSFQPVFYR-------VSLARH-GGLPPAPTSEEVPLGGDFQFIPDAFNSNGIAATPNGKALIIVNSSEGALYKVDPATGDAKRIDLGGGSVPN-GDGLLLQGKTLYVVQNQLNQIAVIRLKSDFTSGSIV-NTITSELFRVPTTIARFGNSLYAVNARFGTPP--TPDTEYEVVRVPR 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1125.1078.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Superoxide1.150e-21796.88dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide7.750e-15973.75dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Uncharacterized5.930e-10158.57protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.510e-9158.52protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.480e-8176.57protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Superoxide1.550e-8048.17dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide5.130e-7349.16dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A64... [more]
Superoxide7.730e-6948.67dismutase n=3 Tax=Haloferacaceae TaxID=1644056 Rep... [more]
Superoxide7.160e-6747.42dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=... [more]
Superoxide4.450e-6544.87dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 11..233
e-value: 1.3E-5
score: 26.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.598
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 21..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1125contigEcto-sp9_F_contig1125:7416..13236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1125.1078.1mRNA_Ecto-sp9_F_contig1125.1078.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1125 6693..15331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1125.1078.1 ID=prot_Ecto-sp9_F_contig1125.1078.1|Name=mRNA_Ecto-sp9_F_contig1125.1078.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=321bp
MRPFGVLLAASWAIIASEASSRLDVIDLPTGFFPEGITNGEGWTAFVGSL
LNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARV
YDEDFALVADLALSDGNSSFVNDVIITKTAAFFTDSSQPKIYKARQLRPP
VNLDRETGALVDGLAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALIIVN
MESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNALEQI
LEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAED
VATTAYEIVRVDRDSGELVC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like