prot_Ecto-sp9_F_contig1121.1043.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1121.1043.1
Unique Nameprot_Ecto-sp9_F_contig1121.1043.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1121.1043.1 vs.
Match: BIG2, (ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 7.810e-49
Identity = 98/124 (79.03%), Postives = 99/124 (79.84%), Query Frame = 0 
Query:    1 MESKSEDVVDAALGQLHKLIAGGLVRRNTMTTLKDGSSANLGEILVGVVMETGSRDKTVRRGGRAQAVRCLLSCVTSAEIEVHGEELRKVVLFVHETFLVIDSTANRARYNKAQARATLDHILQ 124
            M SKSEDVV+AALGQLHKLIAGGLVRRNTMTTLKDGSSANLGEILVGVVMETGSRDKTV                       HGEELRKV LFVHETFLVIDSTANRARYNKAQARATLDHILQ
Sbjct:   92 MGSKSEDVVEAALGQLHKLIAGGLVRRNTMTTLKDGSSANLGEILVGVVMETGSRDKTV-----------------------HGEELRKVALFVHETFLVIDSTANRARYNKAQARATLDHILQ 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1121.1043.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
BIG2,7.810e-4979.03ArfGEF protein of the BIG/GBF family n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1121contigEcto-sp9_F_contig1121:4944..6698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1121.1043.1mRNA_Ecto-sp9_F_contig1121.1043.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1121 4944..6698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1121.1043.1 ID=prot_Ecto-sp9_F_contig1121.1043.1|Name=mRNA_Ecto-sp9_F_contig1121.1043.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
MESKSEDVVDAALGQLHKLIAGGLVRRNTMTTLKDGSSANLGEILVGVVM
ETGSRDKTVRRGGRAQAVRCLLSCVTSAEIEVHGEELRKVVLFVHETFLV
IDSTANRARYNKAQARATLDHILQ
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