prot_Ecto-sp9_F_contig11141.989.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11141.989.1
Unique Nameprot_Ecto-sp9_F_contig11141.989.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length368
Homology
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: EsV-1-138 (n=2 Tax=root TaxID=1 RepID=D8LPG4_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.050e-37
Identity = 105/361 (29.09%), Postives = 174/361 (48.20%), Query Frame = 0
Query:   26 LWSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAILVKLTMRRQQSVLVLDDFEAFITETTSMRDIVKISRAVGRHGNNQT-------LVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMDIFFIAQESTGDIRQTINQMQFSHYTTGGS------RTMTKNKAI--HVGHHADSTSRRWFTTHRSTSLDCFTKNN--ESSTVDHICSMSKGFHMGVRDHLHRDYTFYFHNSTRNTMRSMWQVAEEVSACDTAGPD-EEDGLYDTENRELWATDNKSAVAHISTAIWLIGGRK 368
            LW ++  P    ++ GN  A  ++  WF++       +ACL + G SG GKST+V + A ++ F    TYA+ +RTP +LE ++ +  +   + V+VLDDFE F+ ETTS+R + K+ R +   G+           +II N+  K F  + D+ST I F+    + + +V  ++A RV    YVPPM  +  +  S+G I Q + Q+Q  +   G +      R   K + I  H   H D  S  W   +    L+    NN  E   +D + S  +     V   LH +Y          ++  +  VAE +S  DT   +   D LYD EN + W+ ++ + V+ ++  +  I G++
Sbjct:   27 LWYQVASPTSHQELVGNGKAIRQIEDWFSEASAEPETSACLFLHGESGTGKSTAVTMIAQKHEFKTVTTYADRSRTPARLEGVVREAGVHGPRGVVVLDDFEIFLEETTSLRVLSKLLRQLLSTGDTSVRNRSRCLFIIISNSKHKQFGSLQDISTTIHFERLHQSEINKVFNRLAWRVRRHSYVPPMASYLSSISSSGTITQGVQQLQLLY--AGDTPPDFLRRPGRKKQKIAGHTNSHRDCISYLWSDIYTDKILEHLVDNNFHEGRVIDRLRSFERERLDKVGGQLHEEYA-----RRMTSVEQLRDVAESISMSDTNRLEFHHDALYDGENSDSWSENDMAFVSFVAYGVLTIKGQR 380          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Replication (factor C large subunit n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A7L4R7A9_9ARCH)

HSP 1 Score: 68.6 bits (166), Expect = 5.020e-9
Identity = 53/206 (25.73%), Postives = 101/206 (49.03%), Query Frame = 0
Query:   26 LWSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAIL----VKLTMRRQQSVLVLDDFEAFITETTSMRDIVKISRAVGRHGNNQTLVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMDIFFIAQESTGDIRQTINQMQ 227
            L +E   P+K+ D+ GN     +L  W  +  +   G   + + GP+GVGK+T V+  A E   ++    A+  R+ +++E ++    +  T+  +  V+++DD +A +        +  I+ A+ R  N   ++   +A +K    +  +  ++  + + A  V ++L ++A +    C  PP  I  IAQ S GDIR  IN +Q
Sbjct:    2 LLAEKYAPQKTDDVLGNHELKRQLKRWALNWGRGEKGKPII-LTGPTGVGKTTLVNALAKELNLELVQMSASDFRSRERVEKVISGAAMASTLSGKGKVILVDDIDA-MAGREDYGGVAAIA-AILRENNCPMILTATDAYEKKISSLRFLCDILKMRRSIAPSVAKLLTRIAEKEGIPC--PPEKITEIAQNSNGDIRAAINDLQ 202          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Replication (factor C large subunit n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A2J6MZP8_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 6.280e-7
Identity = 49/211 (23.22%), Postives = 95/211 (45.02%), Query Frame = 0
Query:   27 WSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAILVKLTMRRQ----QSVLVLDDFEAFITETT------SMRDIVKISRAVGRHGNNQTLVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMDIFFIAQESTGDIRQTINQMQ 227
            W+   KP+   ++ GN+ A  +L  W     +         + GPSG+GK+ +V+  AA+ G ++    A+  RT + +       +        + +++LD+ +  +T T       ++ DIVK+++          ++I  NA D  F  + +   +I F+    + V + L+++  R           + FIAQ S GD+R  +N +Q
Sbjct:    6 WTVKHKPKFLSEVVGNKDAIQQLVEWVKSWDKRIPKKRAAFIFGPSGIGKTVTVEALAADLGMELVEKNASDYRTEEAINRFAGLASQYGSLFGGKRIILLDELDG-LTGTADKGGVKAITDIVKVAQC-------PIVLIANNAYDPRFTNLRNYCLLIEFKKPPTSEVMKHLKRICIREG--IQADDDALKFIAQRSEGDVRSAVNDLQ 206          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Replication (factor C large subunit n=1 Tax=archaeon SCG-AAA382B04 TaxID=2137776 RepID=A0A2R6T8K2_9ARCH)

HSP 1 Score: 61.2 bits (147), Expect = 1.170e-6
Identity = 58/217 (26.73%), Postives = 91/217 (41.94%), Query Frame = 0
Query:   27 WSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAILVKLTMRRQQSVLVLDDFEAFITETTSMRDIVKISRAVGRHGN----------------NQTLVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMDIFFIAQESTGDIRQTINQMQ 227
            W+E  +P K  D+ GN+ A  +L  W +   +    N  L ++GP GVGK+TS    A +  + V    A+  RT      I+ KL     Q+  + D  +        MR +V I  A   HG                 NQ +++I N      + +   S  I F+      V R L+K+A +     Y   +    IA+ ++GD+R  IN +Q
Sbjct:    6 WTEKYRPTKLKDVVGNKKAKKQLKKWGDQWEEGEPNNKVLRLVGPPGVGKTTSAYALAKQKNWQVMEMNASDKRT----SFIVKKLAGGAAQTGTLSDGAQG-------MR-LVIIDEADNLHGRSDRGGKAAITKVLKQTNQPMILIANDEYDMSRGMRSNSKKIEFKNPNQPEVVRALQKIAKKEGIKAYKNALRE--IARNASGDVRGAINDLQ 208          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: AAA (domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DGJ2_9ZZZZ)

HSP 1 Score: 60.5 bits (145), Expect = 2.320e-6
Identity = 49/210 (23.33%), Postives = 95/210 (45.24%), Query Frame = 0
Query:   32 KPEKSCDIQGNEMATAKLNHWFND----RRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAILVKLTMRRQQSVLVLDDFEAFITETTS----MRDIVKISRAVGRHGNNQTLVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPM-----DIFFIAQESTGDIRQTINQMQF 228
            KP    ++ G++ + + L+ W +           GNA L V+GP G+GK+T+V L A E G+ V    A+  R+   L  +L     R ++ ++V+D+ + F  +       + D++K S        N  ++ I N +     P+     ++ F        + V   +AT + + C    +     D+  + +++  DIR  +NQ++F
Sbjct:   74 KPSSLKEVIGHKDSISTLSQWLSTWSTGGNTEGKGNAAL-VVGPPGIGKTTTVHLLAKEFGYAVTEYNASDTRSVSMLRGLLGLGMKRLRKEIIVMDEVDGFTAQERGGVGELADLIKKS--------NLPIICIANQLVPKLAPLQKACLLVKFS-------RPVKSTIATALLAVCKKEGISKLKADLEALCEQNGNDIRSLLNQLEF 267          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Replication (factor C large subunit n=1 Tax=Candidatus Methanohalarchaeum thermophilum TaxID=1903181 RepID=A0A1Q6DUC4_9EURY)

HSP 1 Score: 57.8 bits (138), Expect = 1.600e-5
Identity = 54/217 (24.88%), Postives = 94/217 (43.32%), Query Frame = 0
Query:   27 WSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAILVKLTMRRQQSVLVLDDFEAFITETTSMRDIVKISRAVGRHGNNQT--LVIICNAIDKSFQPILDV--------------STVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMDIFFIAQESTGDIRQTINQMQ 227
            W E  +P+K  ++ GN+ A  +L  W    +        ++++GP G+GK+TS  + A E+ +++    A+  RT      I+ K+     +S          I++ +  R +V I  A   HG++       I   I +S QPI+ +              S  I F+      V R+L K+A +     Y   +    IA+ + GD+R  IN +Q
Sbjct:    8 WVEKHRPQKFEEVAGNDKAIDQLQEWGEKWKNEIPKYRAVSLVGPPGIGKTTSAYILAKEHKWNIIEMNASDKRTKD----IINKIAGSASKS--------GTISQGSKGRRLVIIDEADNLHGSSDRGGKKAITKVIKESSQPIVLIANDEYGMSKGMRSNSKKIEFKRPNQKEVIRLLNKIAKKEKIKAYKNALRE--IARNANGDVRGAINDLQ 210          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TJV8_POCDA)

HSP 1 Score: 56.6 bits (135), Expect = 4.400e-5
Identity = 58/252 (23.02%), Postives = 103/252 (40.87%), Query Frame = 0
Query:   26 LWSELCKPEKSCDIQGNEMATAKLNHWFNDRR-QHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHT-----------YANVARTPQKLEAILVKLTMRR-----------------QQSVLVLDDFEAFITETTSMRDIVKISRAVGR-----------HGNNQTLVIICNAIDK-------SFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMD-IFFIAQESTGDIRQTINQMQFS 229
            LW E  KP+   ++  ++   A++ +WF D+     G  + L + GP+G GK+ +V++ A+E GF+V+             Y N     Q    I     +R                  ++ VLV D    F  E + +++++   +  G+           HG++    ++   + +       SF PI         QT+    + R++   A    +   +P  D +  +AQ S GDIR  IN +QFS
Sbjct:   49 LWLEKYKPKSELELAVHKKKVAEVRNWFLDQLCTQVGHGSILLLTGPTGAGKTATVNVLASELGFEVQEWLNPVSDTEDEGYFNWKSHSQSQVKIFQDFIVRASKYPTLSIFSGKGDNSVKKIVLVEDLPNIFFREASKLQEVLSTYKQRGQVPIVFVISDSHHGDSNVHKLLPKDVQEKLKIHNISFNPIA--------QTSLVKALNRIISTEAQLNKTTFEIPVKDTVQLLAQNSGGDIRTAINGLQFS 292          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Replication (factor C large subunit n=5 Tax=Methanosarcina TaxID=2207 RepID=A0A0E3NE84_METTE)

HSP 1 Score: 56.2 bits (134), Expect = 5.950e-5
Identity = 49/207 (23.67%), Postives = 91/207 (43.96%), Query Frame = 0
Query:   27 WSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVARTPQKLEAILVKL----TMRRQQSVLVLDDFEAF--ITETTSMRDIVKISRAVGRHGNNQTLVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSFCYVPPMDIFFIAQESTGDIRQTINQMQ 227
            W+E  +P+   +I GN+ A   L  W             + ++GP+GVGK+++    A + G++V    A+  RT   +E +        T+   + +++LD+ +      +   MR I  I +        Q +V+I N +      I ++   I F + ++  +   L+K+       C   P  I  IA+ + GD+R  IN +Q
Sbjct:    7 WAEKYRPQTLKEIVGNKKAVQDLRTWAEKWLSGIPEKRAVILLGPAGVGKTSTAHALARDMGWEVIELNASDQRTAGVIEKVAGSAASMNTLFGGKRLIILDEADNLHGTADRGGMRAIAGIIK-----NTLQPIVLIVNDVYGLTPTIRNLCQEIKFGSVQSRSMIPALKKICESEKILC--SPDAIQQIAENAGGDLRSAINDLQ 206          
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8AHE5_BETVV)

HSP 1 Score: 52.4 bits (124), Expect = 9.050e-5
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0
Query:   19 KRDAQSQLWSELCKPEKSCDIQGNEMATAKLNHWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGF 89
            ++D  +QLWSE  +P +S D+  +     +L  W N+      G+  L  IGP G GKST++++ AAE G+
Sbjct:   37 QQDRSTQLWSERYRPRRSRDLCVSNKKANELRTWLNE------GSGVLVCIGPPGAGKSTALEVLAAELGY 101          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11141.989.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
EsV-1-1381.050e-3729.09n=2 Tax=root TaxID=1 RepID=D8LPG4_ECTSI[more]
Replication5.020e-925.73factor C large subunit n=1 Tax=Candidatus Micrarch... [more]
Replication6.280e-723.22factor C large subunit n=1 Tax=Candidatus Bathyarc... [more]
Replication1.170e-626.73factor C large subunit n=1 Tax=archaeon SCG-AAA382... [more]
AAA2.320e-623.33domain-containing protein n=1 Tax=viral metagenome... [more]
Replication1.600e-524.88factor C large subunit n=1 Tax=Candidatus Methanoh... [more]
Uncharacterized4.400e-523.02protein (Fragment) n=2 Tax=Pocillopora damicornis ... [more]
Replication5.950e-523.67factor C large subunit n=5 Tax=Methanosarcina TaxI... [more]
Uncharacterized9.050e-536.62protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 24..180
e-value: 5.3E-13
score: 51.4
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 68..170
e-value: 2.4E-4
score: 21.6
IPR004582Checkpoint protein Rad17/Rad24PANTHERPTHR12172CELL CYCLE CHECKPOINT PROTEIN RAD17coord: 152..247
coord: 21..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 25..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11141contigEcto-sp9_F_contig11141:944..2047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11141.989.1mRNA_Ecto-sp9_F_contig11141.989.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11141 944..2047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11141.989.1 ID=prot_Ecto-sp9_F_contig11141.989.1|Name=mRNA_Ecto-sp9_F_contig11141.989.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=368bp
MARVDWRRSVVFGEKPTAKRDAQSQLWSELCKPEKSCDIQGNEMATAKLN
HWFNDRRQHAGGNACLAVIGPSGVGKSTSVDLCAAENGFDVEHTYANVAR
TPQKLEAILVKLTMRRQQSVLVLDDFEAFITETTSMRDIVKISRAVGRHG
NNQTLVIICNAIDKSFQPILDVSTVIPFQTAEAAHVQRVLRKVATRVSSF
CYVPPMDIFFIAQESTGDIRQTINQMQFSHYTTGGSRTMTKNKAIHVGHH
ADSTSRRWFTTHRSTSLDCFTKNNESSTVDHICSMSKGFHMGVRDHLHRD
YTFYFHNSTRNTMRSMWQVAEEVSACDTAGPDEEDGLYDTENRELWATDN
KSAVAHISTAIWLIGGRK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR004582Checkpoint_prot_Rad17_Rad24
IPR027417P-loop_NTPase