prot_Ecto-sp9_F_contig11113.964.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11113.964.1
Unique Nameprot_Ecto-sp9_F_contig11113.964.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: USP (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 9.840e-30
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    2 KELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYG 58
            KELYLDSKIKA L+WKQV+RMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYG
Sbjct:  245 KELYLDSKIKACLQWKQVHRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYG 301          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 6.860e-17
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    3 ELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGQ 59
            ELY +S+++  L W+   ++G GL N+GNTC+LN+ LQCLSY+PPLAQHLLNG Y Q
Sbjct:  113 ELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQ 169          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 9.380e-17
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    3 ELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGQ 59
            ELY +S+++  L W+   ++G GL N+GNTC+LN+ LQCLSY+PPLAQHLLNG Y Q
Sbjct:  113 ELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGGYSQ 169          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: USP (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.270e-15
Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0
Query:   14 LRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYG 58
            L W+++ ++GPGL+NLGNTCFLNATLQCL Y PPL QHLLN  YG
Sbjct:    1 LEWRELSKVGPGLQNLGNTCFLNATLQCLLYCPPLVQHLLNHKYG 45          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC)

HSP 1 Score: 75.9 bits (185), Expect = 1.360e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    2 KELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLN 54
            K ++ +SKI   + W +V R+GPGL NLGNTCFLNATLQCL+YLPPLAQ+ L+
Sbjct:  114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLS 166          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.380e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    2 KELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLN 54
            K ++ +SKI   + W +V R+GPGL NLGNTCFLNATLQCL+YLPPLAQ+ L+
Sbjct:  114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLS 166          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.380e-14
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    2 KELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLN 54
            K ++ +SKI   + W +V R+GPGL NLGNTCFLNATLQCL+YLPPLAQ+ L+
Sbjct:  114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLS 166          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: ubiquitin (carboxyl-terminal hydrolase 36-like n=1 Tax=Chlamydotis macqueenii TaxID=187382 RepID=UPI0005297C4E)

HSP 1 Score: 73.6 bits (179), Expect = 1.860e-14
Identity = 29/47 (61.70%), Postives = 40/47 (85.11%), Query Frame = 0
Query:   14 LRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGQV 60
            ++W+QVYR+G GL NLGNTCFLN++LQCL++ PPLA +LL+G + Q 
Sbjct:  105 MKWEQVYRVGAGLHNLGNTCFLNSSLQCLTHTPPLANYLLSGEHSQT 151          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DX59_9ASCI)

HSP 1 Score: 75.1 bits (183), Expect = 2.570e-14
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    6 LDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGQV 60
            L S  K  L WK+ YR+G GL NLGNTCFLN+ LQCLSY PPL  +LLNG +  V
Sbjct:  100 LFSPEKMDLHWKKTYRIGSGLVNLGNTCFLNSALQCLSYTPPLTNYLLNGDHRSV 154          
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Match: USP (domain-containing protein (Fragment) n=1 Tax=Micrurus paraensis TaxID=1970185 RepID=A0A2D4JT96_9SAUR)

HSP 1 Score: 71.6 bits (174), Expect = 3.260e-14
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 0
Query:   11 KAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLN 54
            +  L+W++VYR+G GL NLGNTCFLN+TLQCL+Y PPLA +LL+
Sbjct:  107 RLSLKWERVYRVGAGLHNLGNTCFLNSTLQCLTYTPPLANYLLS 150          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11113.964.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
USP9.840e-3094.74domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Ubiquitin6.860e-1759.65carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sil... [more]
Ubiquitin9.380e-1759.65carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp.... [more]
USP2.270e-1571.11domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Ubiquitin1.360e-1464.15carboxyl-terminal hydrolase n=1 Tax=Nannochloropsi... [more]
Ubiquitin1.380e-1464.15carboxyl-terminal hydrolase n=1 Tax=Nannochloropsi... [more]
Ubiquitin1.380e-1464.15carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloro... [more]
ubiquitin1.860e-1461.70carboxyl-terminal hydrolase 36-like n=1 Tax=Chlamy... [more]
Ubiquitin2.570e-1461.82carboxyl-terminal hydrolase n=1 Tax=Phallusia mamm... [more]
USP3.260e-1465.91domain-containing protein (Fragment) n=1 Tax=Micru... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 25..54
e-value: 6.5E-9
score: 35.7
NoneNo IPR availableGENE3D3.90.70.10coord: 3..60
e-value: 7.4E-12
score: 47.1
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 12..55
NoneNo IPR availablePANTHERPTHR24006:SF653UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 36coord: 12..55
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 25..40
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 24..61
score: 12.236
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 16..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11113contigEcto-sp9_F_contig11113:142..327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11113.964.1mRNA_Ecto-sp9_F_contig11113.964.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11113 139..327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11113.964.1 ID=prot_Ecto-sp9_F_contig11113.964.1|Name=mRNA_Ecto-sp9_F_contig11113.964.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=62bp
MKELYLDSKIKAGLRWKQVYRMGPGLRNLGNTCFLNATLQCLSYLPPLAQ
HLLNGFYGQVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf