prot_Ecto-sp9_F_contig11099.950.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11099.950.1
Unique Nameprot_Ecto-sp9_F_contig11099.950.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length177
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11099.950.1 vs.
Match: PsbP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW7_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 2.000e-114
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0 
Query:    1 MIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILNSIQASFRVGDVGVVETSSTDFNTK 176
            MIAEDG FTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILN+IQASFRVGDVGVVETSSTD NTK
Sbjct:    1 MIAEDGDFTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILNAIQASFRVGDVGVVETSSTDLNTK 176
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BLAST of mRNA_Ecto-sp9_F_contig11099.950.1 vs.
Match: PsbP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH7_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 1.040e-108
Identity = 167/176 (94.89%), Postives = 169/176 (96.02%), Query Frame = 0 
Query:    1 MIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILNSIQASFRVGDVGVVETSSTDFNTK 176
            MIAEDGGFTSSYVKVEDNGQ TVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMG PSKAKTIGDV ALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVER+SYIAATVKQRKL TLVATVS ERRNKMDLIL +IQASFRVGDVGVVETSSTDFN K
Sbjct:   87 MIAEDGGFTSSYVKVEDNGQETVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGAPSKAKTIGDVSALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERVSYIAATVKQRKLLTLVATVSGERRNKMDLILKAIQASFRVGDVGVVETSSTDFNIK 262
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BLAST of mRNA_Ecto-sp9_F_contig11099.950.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUM0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.850e-10
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 0 
Query:   19 GQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSK--AKTIGDVGALAIAAEATPSEG-----AAKVLQ-EKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILNSIQASFR 159
            G   + ++AYP  WVE  K      A+NYQTGD + L      +   +++ D+    +A   TP +      A KV++ E+  +     Y  +T+K+NT+T SGYDVE+    + T+ +  LF L A+  + R+ KM+  +     SFR
Sbjct:   46 GAKAIISFAYPKTWVETTKGRTLG-ASNYQTGDRVVLVTKAKGQYDGRSVMDIPVQELAEVITPGDATQAASAYKVMKDEQLASMKSQEYRLVTLKFNTITSSGYDVEQYLVASCTLSKGNLFCLAASCPTARKKKMEESITKTALSFR 193
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11099.950.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
PsbP2.000e-11498.30domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PsbP1.040e-10894.89domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical4.850e-1031.54protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 25..160
e-value: 1.3E-9
score: 38.4
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 8..160
e-value: 7.7E-11
score: 44.1
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 25..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11099contigEcto-sp9_F_contig11099:1315..2065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11099.950.1mRNA_Ecto-sp9_F_contig11099.950.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11099 393..2099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11099.950.1 ID=prot_Ecto-sp9_F_contig11099.950.1|Name=mRNA_Ecto-sp9_F_contig11099.950.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=177bp
MIAEDGGFTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTG
DSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNY
TYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLI
LNSIQASFRVGDVGVVETSSTDFNTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand