prot_Ecto-sp9_F_contig1109.946.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1109.946.1
Unique Nameprot_Ecto-sp9_F_contig1109.946.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length1111
Homology
BLAST of mRNA_Ecto-sp9_F_contig1109.946.1 vs.
Match: PWWP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA8_9PHAE)

HSP 1 Score: 1253 bits (3241), Expect = 0.000e+0
Identity = 841/1129 (74.49%), Postives = 866/1129 (76.71%), Query Frame = 0
Query:    2 VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWNFLKSQGRDRRKGKDREQRASLGEDGGAAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVAEKRESGRELTSPAAAQAAAAIAVVSPAAAALTGRGRQEGEGTREGSQGASKMAREEVIEEARVFTAGDSAGAGANSLAELLVPGGKAPPEESSAGCLPSAGRVAFQDEDDAQKVTEKADSQPAAADTRATEATPATGDKQDADTSATTTARLGGLQASDGAQGGAYSTPLEGKVGVARPASSSQQATARDGGEEGLNANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVGPAGVDDEKDRTRLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEASSGPMEVEGGGVELERNSGTMKTAAVEESREPAGMSDDGNGDKTPVLDGQTEATPAAGDDTGPNAAFPVEDAAGAAASTPADSGGNEGDGG------------------NPSKTAGVDWFEKTKPSGTRGDIDDGDDDAEVPESVKGMQEGGRRDPGAGEQQVEEDNAVATAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTPTTMTKAEADDAGLTEGNEMDGMDEAAEDXXXXXXXXXXVEPEKRWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLLKSAAGVLPALQEQDMQEQALINQDLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEARDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQQXXXXXXXXXXXXXXAAGTRLTGSAXXXXXXXXXXXXXXXXXXTTHRSVPPGLAAQRGLALAXXXXXXXXXXXXAAG--GETVKVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSQKRGXXXXXSELEQHQPAAPAERQPSRKKMPAALAQAELASGSMNMVR 1110
            VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLE AL    RDMME+LA+DWSSMAVAEGEDVSWDSPYDW FLK QGRDRRKGKDREQRAS GEDG AA SATVGSG AA+GG GPTAA VGA+ARAPSRGKR VA+KRE GRELTSPAAAQA      VSPAAAALTGRGRQEGE  REG+QGASKMAREEV EEARVF AGD AGAGANSLAELLVP G+A PEESSAGCLPSA RVAF D DDA+KVTEKADSQP  ADT A EAT  TGDKQDA TS T TARLGGLQASD AQ  AYSTPLEGKVGV RPASSS++ATARDGGE GLNA++ XXXXXXXXXXXXXXXXXX                                                                       GV+GPAGVDDEKD TRLKE ADD TATDAGGSISHP EAAGGGSAA NVASEASSGPMEVEGGGVELE+ S TMK AAVEESRE AGMSDDGNGDKTPVLDGQTEATPAAGDDTGP+ AF ++ AAGAAA                                N SKTAGVD FEKTKPSGT+ D DDGDDDAEVPE V+GMQEGGRRDPGAGEQQVE DNAVATAAV                           KK   TMTKAEAD AGLTEGN      +          XXXXVEPEKRWEMEREGIALANLSA LQGALSTDPAFREAWR+EMLAARTLAGVATLVYSLL SAAGVLPALQEQDMQEQALINQ      ALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEA DRLVVFMNE Q FRVNHRFCKPYVGTTKHD VMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQ XXXXXXXXXXX   AAG RLTGSA      XXXXXXXXXXXXTTHR VPPG AAQRGLALAXXXXXXXXXXXXA G  GETV VSRPRRTPK PKYL EGMVG+GGADAPVRSIAGKGK   DGRVGGS+G+W+A KSQKRGXXXXX            ERQPSRKKM  ALAQAELASGSMNMVR
Sbjct:    8 VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLERAL----RDMMESLAIDWSSMAVAEGEDVSWDSPYDWTFLKLQGRDRRKGKDREQRASSGEDGRAALSATVGSGIAAVGGWGPTAAAVGAAARAPSRGKRKVAKKREGGRELTSPAAAQAXXXXXXVSPAAAALTGRGRQEGESIREGTQGASKMAREEVAEEARVFAAGDIAGAGANSLAELLVPVGEASPEESSAGCLPSAARVAFHDGDDAEKVTEKADSQPPTADTPANEATQVTGDKQDAATSTTNTARLGGLQASDSAQLSAYSTPLEGKVGVVRPASSSEKATARDGGE-GLNASNAXXXXXXXXXXXXXXXXXXDAEGSSVGTSDTSTATGRTVASEPKATTPAVATRASEEAKEVRALNKVKEEKAGKTDISGERMGGFRGG--GVIGPAGVDDEKDCTRLKEEADDGTATDAGGSISHPREAAGGGSAAGNVASEASSGPMEVEGGGVELEKGSATMKMAAVEESREQAGMSDDGNGDKTPVLDGQTEATPAAGDDTGPDDAFFLKGAAGAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSKTAGVDRFEKTKPSGTQDDSDDGDDDAEVPEIVEGMQEGGRRDPGAGEQQVEADNAVATAAVAAATVALSVAGDGST------------KKPTMTMTKAEADHAGLTEGNVSLKRVDLEPRYEEDEEXXXXVEPEKRWEMEREGIALANLSAGLQGALSTDPAFREAWRQEMLAARTLAGVATLVYSLLASAAGVLPALQEQDMQEQALINQ------ALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEAGDRLVVFMNEQQHFRVNHRFCKPYVGTTKHDGVMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQXXXXXXXXXXXXAL-AAGERLTGSATAAPPAXXXXXXXXXXXXTTHRLVPPGQAAQRGLALAXXXXXXXXXXXXAGGRRGETVMVSRPRRTPKPPKYLIEGMVGNGGADAPVRSIAGKGK---DGRVGGSSGVWRASKSQKRGXXXXXXXXXXXXXXXXXERQPSRKKMLTALAQAELASGSMNMVR 1107          
BLAST of mRNA_Ecto-sp9_F_contig1109.946.1 vs.
Match: Nucleosome/chromatin (assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI)

HSP 1 Score: 1105 bits (2857), Expect = 0.000e+0
Identity = 784/1112 (70.50%), Postives = 794/1112 (71.40%), Query Frame = 0
Query:    1 QVAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWNFLKSQGRDRRKGKDREQRASLGEDGGAAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVAEKRESGRELTSPAAAQAAAAIAVVSPAAAALTGRGRQEGEGTREGSQGASKMAREEVIEEARVFTAGDSAGAGANSLAELLVPGGKAPPEESSAGCLPSAGRVAFQDEDDAQKVTEKADSQPAAADTRATEATPATGDKQDADTSATTTARLGGLQASDGAQGGAYSTPLEGKVGVARPASSSQQATARDGGEEGLNANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVGPAGVDDEKDRTRLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEASSGPMEVEGGGVELERNSGTMKTAAVEESRE--PAGMSDDGNGDKTPVLDGQTEATPAAGDDTGPNAAFPVEDAAGAAASTPADSGGNEGDGGNPSKTAGVDWFEKTKPSGTRGDIDDGDDDAEVPESVKGMQEGGRRDPGAGEQQVEEDNAVATAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTPTTMTKAEADDAGLTEGNEMDGMDEAAEDXXXXXXXXXXVEPEKRWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLLKSAAGVLPALQEQDMQEQALINQDLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEARDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQQXXXXXXXXXXXXXXAAGTRLTGSAXXXXXXXXXXXXXXXXXXTTHRSVPPGLAAQRGLALAXXXXXXXXXXXXAAGGETVKVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSQKRGXXXXXSELEQHQPAAPAERQPSRKKMPAALAQAELASGSMNMVR 1110
            QVAPLGNTTVTGRHSKDRHGWVREVATARD LALRRPAVQLE ALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDW FLKSQGRDRRKGKDREQRASLGEDG AAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVA+KRESGRELTSPAAAQA          AAA  GRGRQEGEGTREG+QGA K+AREEVIEEARVF AGDSAGAG NSLAELLVPGGKAPPEESSAGCLPSAGRV FQDEDDAQK T                 TPA                    +ASD A+                                                                                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GVDDEKDRTRLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEA+SGPMEVEGGGVELERNSGTMKTAAVE+SRE  PAGMSDDGNGDKTPVLDGQTEATP AG DTGPNAAFPVEDAAGAAASTPADSGGNEGDGGNPSKTA           G  GD                                                                      KKTPTTMTKAEADDAGLTEGNEMDGMDEAAE+XXXXXXXXX VEPEKRWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLL SAAGVLPALQEQDMQEQALINQDLATNQAL VRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQ                                                       MATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQ XXXXXXXXXXXX  AAGTRLTGSAXXXXXXXXXXXXXXXX  T+HRSVPPG AAQRGLALA XXXXXXXXXX AAGGET KVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSQKRGXXXXXSELEQHQPAAPAERQPSRKKMPAALAQAELASGSM+MVR
Sbjct:  920 QVAPLGNTTVTGRHSKDRHGWVREVATARDVLALRRPAVQLERALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSQGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVAKKRESGRELTSPAAAQAXXXXXXXXXXAAAFMGRGRQEGEGTREGAQGARKVAREEVIEEARVFAAGDSAGAGVNSLAELLVPGGKAPPEESSAGCLPSAGRVVFQDEDDAQKAT-----------------TPAVA-----------------TRASDEAK---------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDDEKDRTRLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEANSGPMEVEGGGVELERNSGTMKTAAVEDSREGEPAGMSDDGNGDKTPVLDGQTEATPDAGGDTGPNAAFPVEDAAGAAASTPADSGGNEGDGGNPSKTAVA--------LGVGGD-------------------------------------------------------------------GSTKKTPTTMTKAEADDAGLTEGNEMDGMDEAAEEXXXXXXXXX-VEPEKRWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLLTSAAGVLPALQEQDMQEQALINQDLATNQALRVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQ-------------------------------------------------------MATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQXXXXXXXXXXXXX--AAGTRLTGSAXXXXXXXXXXXXXXXXPATSHRSVPPGQAAQRGLALAAXXXXXXXXXX-AAGGETGKVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSQKRGXXXXXSELEQHQPAAPAERQPSRKKMPAALAQAELASGSMSMVR 1764          
BLAST of mRNA_Ecto-sp9_F_contig1109.946.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI97_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.860e-8
Identity = 41/134 (30.60%), Postives = 68/134 (50.75%), Query Frame = 0
Query:  778 LPALQEQDMQEQALINQ-------DLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEARDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLRV--AHE 902
            LP L+EQ     A +N          A + ++ V    TSE+VWAR+ G+PWWP+ V +P    F +++ E  + LVVF+ E  Q+ +      P+ G    D+      + +R + R++++A    R+  AHE
Sbjct:    3 LPDLEEQAANALAFLNDANAYGEDGRAIDPSVRVSSEPTSEMVWARVKGYPWWPSRVHRPRDPKFSQAMSERNEILVVFVGEAAQYHLPLEDTAPFTG----DEQDSHMPKKDRHIQRSLRLAIHTTRMIQAHE 132          
BLAST of mRNA_Ecto-sp9_F_contig1109.946.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLH6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.260e-5
Identity = 42/137 (30.66%), Postives = 68/137 (49.64%), Query Frame = 0
Query:  744 PAFREAWR---KEMLAARTLAGVATLVYSLLKSAAGVLPALQEQDMQEQALINQD-------LATNQALHVRCSS--TSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEARDRLVVFMNEHQQFRVNHRFCKPYVG 868
            P  R  WR   KE +  +T A  A L+Y+L  +A   LP ++ Q  +   L+N +       + + +A  V   S  T  ++WAR+ GFPWWPA +       F+R L E  + L+VF+ E  ++ +      P++G
Sbjct:   79 PETRNGWRLKLKETI--KTEASYALLLYTLTDTARRRLPDIEHQANEATQLLNGNAPRAEGPMVSTRAAAVMIPSIGTQTMLWARVSGFPWWPARLHTALNPEFERVLKERSEVLIVFVGEAHKYHLPETSVAPFLG 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1109.946.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
PWWP0.000e+074.49domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Nucleosome/chromatin0.000e+070.50assembly factor group n=1 Tax=Ectocarpus siliculos... [more]
Hypothetical2.860e-830.60protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.260e-530.66protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 803..903
e-value: 1.2E-11
score: 46.5
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 807..912
IPR000313PWWP domainPFAMPF00855PWWPcoord: 810..897
e-value: 7.5E-11
score: 42.3
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 809..869
score: 11.552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1109contigEcto-sp9_F_contig1109:18017..26095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1109.946.1mRNA_Ecto-sp9_F_contig1109.946.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1109 18017..26095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1109.946.1 ID=prot_Ecto-sp9_F_contig1109.946.1|Name=mRNA_Ecto-sp9_F_contig1109.946.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1111bp
QVAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSR
DMMENLAMDWSSMAVAEGEDVSWDSPYDWNFLKSQGRDRRKGKDREQRAS
LGEDGGAAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVAEKRES
GRELTSPAAAQAAAAIAVVSPAAAALTGRGRQEGEGTREGSQGASKMARE
EVIEEARVFTAGDSAGAGANSLAELLVPGGKAPPEESSAGCLPSAGRVAF
QDEDDAQKVTEKADSQPAAADTRATEATPATGDKQDADTSATTTARLGGL
QASDGAQGGAYSTPLEGKVGVARPASSSQQATARDGGEEGLNANSANSAN
SNSNDSNSSNSRAAPADAEGSSVDTSDTSTATARTVASEPKATTPAVATR
ASDEAKELKEVKEVKAGKAGKTDISGDSSGGLGGGGVVGPAGVDDEKDRT
RLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEASSGPMEVEGGGV
ELERNSGTMKTAAVEESREPAGMSDDGNGDKTPVLDGQTEATPAAGDDTG
PNAAFPVEDAAGAAASTPADSGGNEGDGGNPSKTAGVDWFEKTKPSGTRG
DIDDGDDDAEVPESVKGMQEGGRRDPGAGEQQVEEDNAVATAAVTAATAT
AVSAAAAAATVALGVGGDGSTKKTPTTMTKAEADDAGLTEGNEMDGMDEA
AEDEEEEEEEEDEVEPEKRWEMEREGIALANLSAELQGALSTDPAFREAW
RKEMLAARTLAGVATLVYSLLKSAAGVLPALQEQDMQEQALINQDLATNQ
ALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEARDRLVVFM
NEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLRVA
HERFGSDGDPNAPHNRPNFDTQDTQQQPAAAAAAAAAAPPAAGTRLTGSA
TAAPPAAAGKVLTGSATATTHRSVPPGLAAQRGLALAAAAAAAAAGVGAA
AGGETVKVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRV
GGSTGMWQARKSQKRGGGGGGSELEQHQPAAPAERQPSRKKMPAALAQAE
LASGSMNMVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom