prot_Ecto-sp9_F_contig11004.891.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig11004.891.1
Unique Name	prot_Ecto-sp9_F_contig11004.891.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	105

Homology

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BLAST of mRNA_Ecto-sp9_F_contig11004.891.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ1_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.410e-58
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0

Query:   11 QVEEHPVYDLPKEWKALVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHSGTIDFHEYVMGFA 105
            QVEEHPVYDLPKEWK LVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHSGTIDF EYVMGFA
Sbjct:   11 QVEEHPVYDLPKEWKTLVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHSGTIDFQEYVMGFA 105

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BLAST of mRNA_Ecto-sp9_F_contig11004.891.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K900_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.320e-57
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0

Query:    1 VADVVYGALGQVEEHPVYDLPKEWKALVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNH 91
            V+DVVYGALGQ EEHPVYDLPKEWK LVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNH
Sbjct:  121 VSDVVYGALGQAEEHPVYDLPKEWKTLVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNH 211

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BLAST of mRNA_Ecto-sp9_F_contig11004.891.1 vs.
Match: ATP-NAD (kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.280e-30
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0

Query:   23 EWKALVSTLCLRTNFEPAELADLFQRFRQLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHSGTIDFHEYVMGFA 105
            +W  +   L LRTNF P EL DL+Q FR++AG+KEYL+  EFRRT++RNFGIM EEW  KYF+AFDRN SGTIDF EYVMGFA
Sbjct:   70 DWAQITKALKLRTNFTPEELEDLWQSFREIAGSKEYLSRDEFRRTIKRNFGIMKEEWATKYFRAFDRNDSGTIDFPEYVMGFA 152

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig11004.891.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig11004.891.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
EF-hand	2.410e-58	97.89	domain-containing protein n=1 Tax=Ectocarpus silic...	[more]
Uncharacterized	1.320e-57	96.70	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
ATP-NAD	1.280e-30	67.47	kinase-like domain-containing protein n=1 Tax=Trib...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 25..105 e-value: 4.9E-14 score: 54.3
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 88..100
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 75..105 score: 13.732
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 27..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig11004	contig	Ecto-sp9_F_contig11004:1326..3278 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig11004.891.1	mRNA_Ecto-sp9_F_contig11004.891.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig11004 1324..3278 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig11004.891.1 ID=prot_Ecto-sp9_F_contig11004.891.1|Name=mRNA_Ecto-sp9_F_contig11004.891.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=105bp
VADVVYGALGQVEEHPVYDLPKEWKALVSTLCLRTNFEPAELADLFQRFR
QLAGTKEYLTAGEFRRTVRRNFGIMNEEWVKKYFKAFDRNHSGTIDFHEY
VMGFA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair