prot_Ecto-sp9_F_contig110.878.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig110.878.1
Unique Nameprot_Ecto-sp9_F_contig110.878.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length654
Homology
BLAST of mRNA_Ecto-sp9_F_contig110.878.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA8_ECTSI)

HSP 1 Score: 1103 bits (2853), Expect = 0.000e+0
Identity = 605/652 (92.79%), Postives = 625/652 (95.86%), Query Frame = 0
Query:    1 MEIGITNYEGGEQEWLRPAVPASRPTAPTESKRTSVLKHRTFAPNSFGRSKAPSGEGGKGDIEIAKEDKKFRNGLKRNIIHLSNLTRVNQEQLARLREQLKAKDHEIASLKALKENVRQEDRQQDPPEQGPGPSERTKAGRCGPRKLVTYGKIVVTAGRLASEPWQRPEKAVAQPSEEETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLRQAYPLSLVSDSDKAKSETQQRIGLLEFDLNETAKACQRESLKASTFEGMYQEASTMATLLQAEVEQCRTDAKMIAQELTRMQIESERSSALVGLTPSLALSSPVDVGRAVGGVEGEEMTKGKLGEEHEAEIASLKKTIAQLESEKSESGEAVNNLLEAHRREDEERERAFKEMQKKADSFAEENSGLRATIEKQEEESERQRVEEDQRHDRDIKREIVLSQQNLDSASLRDRLCRTLDELCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGRVHGSSGESPGSVTHAEPECYLCGQQDRGAADRVACVGMAPNRALASVVVKFAFRRQLVQTLKEIGAALS 652
            MEIG TN +GGEQEWLRPAVPASRPTAPTESKRTSVLKHRTFAP SFGR+KAPSGEGGK DIEIAK+D+ FRNGLKRNIIHLSNLTRVNQEQLARLREQLKAKDHEIASLKALKENVRQEDRQQDPPE+GPGPSERT AGRCGPRKLVTYGK+VVTAGRLASEP QRPEKAVAQPSE+ETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVN+AEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLR       VSDSDKAKSE QQRI LLEFDLNETAKACQRESLKASTFEGMYQEASTMATLLQAEVEQCRTDAKMIAQELTRMQIESE+SSALVGLTPSLALSSPVDVGRAVGGV+G+E+T GKLGEE EAEIASLKK IAQL SEKS+SG+A+ NLLEAHRRE EERERAFKEMQKKADSFAEEN GLRATIEKQEEESERQRVEED+RHDRDIKREI+LSQQNLDSASLRDRLCRT+DELCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDG+GRV G SGESPGSVTHAEPECYLCGQQ RGA DRVACVGMAPNRALASVV+KFAFRRQLVQTLKEIGAALS
Sbjct:    1 MEIGTTNCDGGEQEWLRPAVPASRPTAPTESKRTSVLKHRTFAPKSFGRNKAPSGEGGKDDIEIAKDDENFRNGLKRNIIHLSNLTRVNQEQLARLREQLKAKDHEIASLKALKENVRQEDRQQDPPEKGPGPSERTNAGRCGPRKLVTYGKMVVTAGRLASEPRQRPEKAVAQPSEKETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNVAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLR-------VSDSDKAKSEAQQRIDLLEFDLNETAKACQRESLKASTFEGMYQEASTMATLLQAEVEQCRTDAKMIAQELTRMQIESEKSSALVGLTPSLALSSPVDVGRAVGGVDGKEVTTGKLGEEQEAEIASLKKIIAQLASEKSDSGDAMKNLLEAHRREGEERERAFKEMQKKADSFAEENIGLRATIEKQEEESERQRVEEDERHDRDIKREIILSQQNLDSASLRDRLCRTVDELCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGTGRVPGGSGESPGSVTHAEPECYLCGQQGRGATDRVACVGMAPNRALASVVMKFAFRRQLVQTLKEIGAALS 645          
BLAST of mRNA_Ecto-sp9_F_contig110.878.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F2_9PHAE)

HSP 1 Score: 830 bits (2143), Expect = 2.370e-297
Identity = 479/568 (84.33%), Postives = 497/568 (87.50%), Query Frame = 0
Query:  114 KENVRQEDRQQDPPEQGPGPSERTKAGRCGPRKLVTYGKIVVTAGRLASEPWQRPEKAVAQPSEEETLETERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLRQAYPLSLVSDSDKAKSETQQRIGLLEFDLNETAKACQRESLKASTFEGMYQEASTMATLLQAEVEQCRTDAKMIAQELTRMQIESERSSALVGLTPSLALSSPVDVGRAVGGVEGEEMTKGKLGEEHEAEIASLKKTIAQLESEKSESGEAVNNLLEAHRREDEERERAFKEMQKK-----------------------------ADSFAEENSGLRATIEKQEEESERQRVEEDQRHDRDIKREIVLSQQNLDSASLRDRLCRTLDELCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGRVHGSSGESPGSVTHAEPECYLCGQQDRGAADRVACVGMAPNRALASVVVKFAFRRQLVQTLKEIGAALS 652
            KENVRQED QQDPPEQGPGPSERT  G+ GPRKL+TYGK+VVTAGRLASEP QRPEKAVAQPSE+ETLE ERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQ LKEERRESRLR       VSDSDKAKSE QQRI LLEFDLNET KACQ     ASTFEGMYQEASTMATLLQAEVEQCRTDAK+IAQE     IESE+SSALVGLTPS+ALSS VDVGRAVGGVEGEE+TK KL EE EAEIASLKKTIAQLESEKSESG+A+ +LLEAHRRE EERERAFKEMQKK                             AD FAEENSGLRA IEKQE +S+RQRVEED+R DRDIKREI+LSQQ+LDSASLRDRLCRTLD LCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGR+ G SGESPGSVTHAEPECYLCGQQDRGA DRVACVG+APNRALASVVVKFAFRRQLVQ LKEIGAALS
Sbjct:   12 KENVRQEDWQQDPPEQGPGPSERTNTGKWGPRKLITYGKMVVTAGRLASEPRQRPEKAVAQPSEQETLEKERAVAAMGAKHTEQQLLRASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQXLKEERRESRLR-------VSDSDKAKSEAQQRIELLEFDLNETVKACQ-----ASTFEGMYQEASTMATLLQAEVEQCRTDAKIIAQE-----IESEKSSALVGLTPSVALSSSVDVGRAVGGVEGEEVTKEKLREEQEAEIASLKKTIAQLESEKSESGDAMKSLLEAHRREGEERERAFKEMQKKCVTSGARILTSSHCLSFSQSHSIRRPARRADFFAEENSGLRAKIEKQEADSKRQRVEEDERRDRDIKREIILSQQHLDSASLRDRLCRTLDALCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGRMPGGSGESPGSVTHAEPECYLCGQQDRGAVDRVACVGIAPNRALASVVVKFAFRRQLVQALKEIGAALS 562          
BLAST of mRNA_Ecto-sp9_F_contig110.878.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S0_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.650e-46
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0
Query:    1 MEIGITNYEGGEQEWLRPAVPASRPTAPTESKRTSVLKHRTFAPNSFGRSKAPSGEGGKGDIEIAKEDKKFRNGLKRNIIHLSNLTRVNQEQLARLREQLKAK 103
            M+IGI N EGGEQEWLRPAVPASRPTAPTESKRT +LKHRTFAPNSFGRSK   GEGGK DIEIAK+D+KFRNGLKRNIIHLSNLTRVNQEQLARLREQ++ K
Sbjct:    1 MDIGIMNCEGGEQEWLRPAVPASRPTAPTESKRTRILKHRTFAPNSFGRSK---GEGGKDDIEIAKDDEKFRNGLKRNIIHLSNLTRVNQEQLARLREQVQTK 100          
BLAST of mRNA_Ecto-sp9_F_contig110.878.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD04_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.150e-5
Identity = 39/127 (30.71%), Postives = 56/127 (44.09%), Query Frame = 0
Query:  525 RTLDELCGAEEAGELVLTCQRCAKLFKDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGRVHGSSGESPGSVTHAEPECYLCGQQDRGAADRVACVGMAPNRALASVVVKFAFRRQLVQTLKEIGAAL 651
            +T++ L  AE A E   TC +C +LFK P T+APCGHT CA C                         G+V    P   +C   +        C+   PN ALA +  +F FR+Q + +L  +  +L
Sbjct:  727 QTVNSLLDAEHASESTFTCLQCMQLFKQPMTLAPCGHTYCASCLT---------------------KCGNVD--VPSSIVCKMCETSTKMETECI--FPNLALADLTARFIFRQQSLASLTTMCLSL 828          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig110.878.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized0.000e+092.79protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.370e-29784.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.650e-4686.41protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
RING-type2.150e-530.71domain-containing protein n=1 Tax=Phytophthora meg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 266..286
NoneNo IPR availableCOILSCoilCoilcoord: 93..120
NoneNo IPR availableCOILSCoilCoilcoord: 200..251
NoneNo IPR availableCOILSCoilCoilcoord: 414..494
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 89..530
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 89..530
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 532..644
e-value: 9.9E-8
score: 33.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig110contigEcto-sp9_F_contig110:23977..29621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig110.878.1mRNA_Ecto-sp9_F_contig110.878.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig110 23977..29621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig110.878.1 ID=prot_Ecto-sp9_F_contig110.878.1|Name=mRNA_Ecto-sp9_F_contig110.878.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=654bp
MEIGITNYEGGEQEWLRPAVPASRPTAPTESKRTSVLKHRTFAPNSFGRS
KAPSGEGGKGDIEIAKEDKKFRNGLKRNIIHLSNLTRVNQEQLARLREQL
KAKDHEIASLKALKENVRQEDRQQDPPEQGPGPSERTKAGRCGPRKLVTY
GKIVVTAGRLASEPWQRPEKAVAQPSEEETLETERAVAAMGAKHTEQQLL
RASRDVRGQLERALQEAEALRADNIAFKTRVNLAEKEKAHLETRVALLSD
EVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLRQAYPLSLVSD
SDKAKSETQQRIGLLEFDLNETAKACQRESLKASTFEGMYQEASTMATLL
QAEVEQCRTDAKMIAQELTRMQIESERSSALVGLTPSLALSSPVDVGRAV
GGVEGEEMTKGKLGEEHEAEIASLKKTIAQLESEKSESGEAVNNLLEAHR
REDEERERAFKEMQKKADSFAEENSGLRATIEKQEEESERQRVEEDQRHD
RDIKREIVLSQQNLDSASLRDRLCRTLDELCGAEEAGELVLTCQRCAKLF
KDPHTMAPCGHTLCAGCCAGGDGGMSAEDGSGRVHGSSGESPGSVTHAEP
ECYLCGQQDRGAADRVACVGMAPNRALASVVVKFAFRRQLVQTLKEIGAA
LSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD