prot_Ecto-sp9_F_contig1097.844.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1097.844.1
Unique Nameprot_Ecto-sp9_F_contig1097.844.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length67
Homology
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.970e-14
Identity = 35/52 (67.31%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   14 DSFTLSTPFQGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGLLSTQ 65
            D  TL T  QG+Y +AEPLY RAT IWE+ALG +HP VAT LNNRAGLL  Q
Sbjct:  648 DFVTLPTYIQGEYAEAEPLYARATEIWERALGPEHPLVATALNNRAGLLERQ 699          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.530e-12
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    6 ARTLVLKHDSFTLSTPFQGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGLLS 63
            A T +L +  FT     QGK+ +AEPLYRRAT IWE ALG +HP +AT LNNRAGLLS
Sbjct:  722 ALTTLLTYLPFTS----QGKFAEAEPLYRRATEIWETALGPEHPQMATALNNRAGLLS 775          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN14_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 5.110e-12
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0
Query:   24 GKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGLLSTQM 66
            GK+ +AEPLYRRAT IWE ALG +HP VAT LNNRAGLL  Q+
Sbjct:    2 GKFAEAEPLYRRATEIWETALGPEHPHVATALNNRAGLLIKQV 44          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: Tetratricopeptide (repeat-containing protein (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JJF2_9CYAN)

HSP 1 Score: 60.1 bits (144), Expect = 1.070e-10
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   23 QGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGL 61
            QG Y QAEPLY+R+  IWEKALG++HP VAT LNN A L
Sbjct:    9 QGNYSQAEPLYQRSLAIWEKALGSEHPNVATSLNNLADL 47          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: tetratricopeptide (repeat protein n=1 Tax=Nitrosospira sp. NRS527 TaxID=155925 RepID=UPI001AF79F07)

HSP 1 Score: 59.3 bits (142), Expect = 7.690e-10
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   23 QGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGL 61
            QG+Y +AEPLY+R+  IWEK LGADHP VAT LNN A L
Sbjct:    7 QGQYTKAEPLYQRSLKIWEKTLGADHPDVATSLNNLATL 45          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.290e-9
Identity = 37/84 (44.05%), Postives = 42/84 (50.00%), Query Frame = 0
Query:   10 VLKHDSFTLSTPFQGKYVQAEPLYRRATVIWEKALGADHP---------------------------TVATVLNNRAGLLSTQM 66
            V KHD  TL T FQGKY +AEPLY+R+  I EK  G DHP                           TVAT LNNRA LL +Q+
Sbjct:  491 VSKHDPVTLPTAFQGKYEEAEPLYKRSLAIDEKVYGPDHPXXXXXXXXXXXXXXXXXXXXXXXXXXXTVATALNNRAWLLESQV 574          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR2_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.360e-9
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   19 STPFQGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGLLSTQ 65
            S  FQGK  +A+PL+ RA  IWEKA   DHP VA VL+NRAGLLS Q
Sbjct:  147 SRTFQGKDTEAQPLFERAIKIWEKAHRHDHPLVANVLHNRAGLLSAQ 193          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: tetratricopeptide (repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 56.6 bits (135), Expect = 4.440e-9
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   23 QGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGL 61
            QGKY +AEPLY+RA  I E  LG DHP+VAT LNN AGL
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.120e-8
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   23 QGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGLL 62
            QG Y +A+PLY R+  I +K LG DHP VATVLNNRAGLL
Sbjct:  205 QGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLL 244          
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU99_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.580e-8
Identity = 31/65 (47.69%), Postives = 37/65 (56.92%), Query Frame = 0
Query:    2 FLHSARTLVLKHDSFTLSTPFQGKYVQAEPLYRRATVIWEKALGADHPTVATVLNNRAGLLSTQM 66
            FL       L H S    T  QGKY +A+  Y R+  I ++  GADHP VAT LNN AGLL TQ+
Sbjct:  448 FLRVVEQFKLLHPSSRTITVSQGKYSEAKTFYERSLAIDKRVYGADHPQVATTLNNLAGLLETQV 512          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1097.844.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
NB-ARC5.970e-1467.31domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized2.530e-1262.07protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.110e-1272.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Tetratricopeptide1.070e-1069.23repeat-containing protein (Fragment) n=1 Tax=Cyano... [more]
tetratricopeptide7.690e-1069.23repeat protein n=1 Tax=Nitrosospira sp. NRS527 Tax... [more]
NB-ARC1.290e-944.05domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized2.360e-963.83protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
tetratricopeptide4.440e-969.23repeat protein n=1 Tax=Desulfobacter hydrogenophil... [more]
Uncharacterized1.120e-867.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.580e-847.69protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 16..66
e-value: 2.1E-11
score: 45.4
NoneNo IPR availablePFAMPF13424TPR_12coord: 23..64
e-value: 3.3E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1097contigEcto-sp9_F_contig1097:9535..9735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1097.844.1mRNA_Ecto-sp9_F_contig1097.844.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1097 9528..9831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1097.844.1 ID=prot_Ecto-sp9_F_contig1097.844.1|Name=mRNA_Ecto-sp9_F_contig1097.844.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=67bp
MFLHSARTLVLKHDSFTLSTPFQGKYVQAEPLYRRATVIWEKALGADHPT
VATVLNNRAGLLSTQM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf