prot_Ecto-sp9_F_contig10953.833.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10953.833.1
Unique Nameprot_Ecto-sp9_F_contig10953.833.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length525
Homology
BLAST of mRNA_Ecto-sp9_F_contig10953.833.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 713 bits (1840), Expect = 2.040e-241
Identity = 438/528 (82.95%), Postives = 445/528 (84.28%), Query Frame = 0
Query:    1 QAFPCEPRPLCTPEEKQHLPPLKDNAIEEEGDETPGDVGEGEGGKTVRELARLCYEDPCRGLLEMALLPKMASVIKSYAGQVAADGAQAASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETAAATPTMTATAIPKQLSP---QEPATSRGAGGRARRGGPRDANGCPPPPPQEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLSGXXXXXXXXXAPRVADAVTVERGEGGGGSSGXVGXSVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXVDVGXXXXXXXXXXXXXXXXGASGGSRGGDSLPPRLAFYRALHQLACACVLPPGGNVAGRNKNDGAETAGGDGKAGVGAAGAGVRKEAEGFSVGGVVVVPESWADVGDTVDTAVEAVLLWLLSGVSGGXXXXXXXXAAETAQQVS 525
            QAFPCEPRPLCTPEEKQHLPPLKD+AIEEEGDETPGD GEGEGGKTVRELARLCYEDPCRGLLEMALLPK+ASVIKSYA QVAADGAQAASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETA AT  +TATAIPKQLSP   QEPATS  A G+AR  GPRDANGCPP   QEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLSG    XXXXX                     X  X VGE+   XXXXXXXXXXXXXXXXXXXXXXXV                   GA GGSRGGDSLPPRLAFYRALHQLACACVLPPG + AGRNKNDGAETAGGDGKAG GAAG GVRKEAEGFSVGGV VVPESWADVGDTVD AVE  LLWLLSGV GG     XX AAETAQQ +
Sbjct:  528 QAFPCEPRPLCTPEEKQHLPPLKDSAIEEEGDETPGDGGEGEGGKTVRELARLCYEDPCRGLLEMALLPKIASVIKSYADQVAADGAQAASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETAPAT--VTATAIPKQLSPPPPQEPATSARAEGKARTEGPRDANGCPPXXXQEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLSGGVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEEPTAXXXXXXXXXXXXXXXXXXXXXXXVGA-----QSSSGVAQSTSGGAGGGSRGGDSLPPRLAFYRALHQLACACVLPPGVSAAGRNKNDGAETAGGDGKAGAGAAGTGVRKEAEGFSVGGVAVVPESWADVGDTVDAAVEGALLWLLSGVRGGGRVGGXX-AAETAQQAA 1047          
BLAST of mRNA_Ecto-sp9_F_contig10953.833.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 671 bits (1730), Expect = 6.670e-225
Identity = 427/596 (71.64%), Postives = 435/596 (72.99%), Query Frame = 0
Query:    1 QAFPCEPRPLCTPEEKQHLPPLKDNAIEEEGDETPGDVGEGEGGKTVRELARLCYEDPCRGLLE---------------------------------------------------------------MALLPKMASVIKSYAGQVAADGAQAASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETAAATPTMTATAIPKQLSP---QEPATSRGAGGRARRGGPRDANGCPPPPP-QEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLS----GXXXXXXXXXAPRVADAVTVERGEGGGGSSGXVGXSVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXVDVGXXXXXXXXXXXXXXXXGASGGSRGGDSLPPRLAFYRALHQLACACVLPPGGNVAGRNKNDGAETAGGDGKAGVGAAGAGVRKEAEGFSVGGVVVVPESWADVGDTVDTAVEAVLLWLLSGVSGGXXXXXXXXAAETAQQVS 525
            QAFPCEPRPLCTPEEKQHLPPLKDNAIEEEGDETPGD GEGEGGKTVRELARLCYEDPCRGLLE                                                               MALLPK+ASVIKS AGQV+ADGAQA SDGGGGLGD GS HGAARATA A AVS RPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPR DGTLPLDLSE A AT T       KQLSP   QEPAT   A G+AR GGP DANGCP     QE LALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYG+DVAAADTVVLVARGQGWWPGLS    GXXXXXXXXXAP VAD VTVERG+GG              XXXXXXXXXXXXXX            V VG                GASGGSRGGDS+PPRLAFYRALHQLACACVLPPGGN AGRNKNDGAETAGGDGKAGVGAAGAG+RKEAEGFSVGGVVVVPESWADVGDTVD AVEAVLLWLL  V GG         AETAQQ +
Sbjct:   17 QAFPCEPRPLCTPEEKQHLPPLKDNAIEEEGDETPGDGGEGEGGKTVRELARLCYEDPCRGLLEVTGCARQGDQGGGPQTVYGLPHRLQCLEVVMHVHEGASGAARRGDPSSNFSLSVGQSGPKKRVMALLPKIASVIKSCAGQVSADGAQAGSDGGGGLGDMGSVHGAARATAEAAAVSLRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRTDGTLPLDLSEAAPATTT-------KQLSPAPPQEPATPARAEGKARGGGPGDANGCPXXXXXQEGLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGLSVGGVGXXXXXXXXXAPLVADTVTVERGDGG-------------XXXXXXXXXXXXXXXTAATPVAAKSLPVGVGVGGARSTSG-------GASGGSRGGDSVPPRLAFYRALHQLACACVLPPGGNAAGRNKNDGAETAGGDGKAGVGAAGAGLRKEAEGFSVGGVVVVPESWADVGDTVDAAVEAVLLWLLRSVRGGGGVDGGG-TAETAQQAA 584          
BLAST of mRNA_Ecto-sp9_F_contig10953.833.1 vs.
Match: RPAP1_C (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.370e-17
Identity = 102/302 (33.77%), Postives = 144/302 (47.68%), Query Frame = 0
Query:    8 RPLCTPEEKQHLPPLKDNAIEEEGDETPGDVGEGEGGKTVRELARLCYEDPCRGLLEMALLPKMASVIKSYAGQVAADGAQAASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETAAATPTMTATAIPKQLSPQEPATSRGAGGRARRGGPRDANGCPPPPPQEQLALLAVRLARVLVQSGRGVA---LALSQTPLLGSTKGWLALG-QGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVAR 305
            RP CT EE++ +  L  +  EEEG+E        +G  ++++ AR  Y +P RGLL M LLP++ ++ + +A     D + A++           +  AA A AAA   S  P  A+ CLRVL AVA  +   AER+ +EPGLLDAVREAF+EP   G  P+ LS                         S G GG +   G  D    P        A+ A+RLAR +    R  A   L   +  +L + +  LALG          L A Q E L +W  CL YG+ + AA+TV+ +A+
Sbjct:  307 RPQCTVEEQRGMDAL--DGGEEEGEE--------QGELSLQQAARAAYLEPVRGLLAMNLLPRLRAITREWA-----DASDASAP----------WVIAAAADAAADCRSAPP-GAVECLRVLVAVARSSAANAERIIAEPGLLDAVREAFVEPDTAGAPPVPLS-----------------------CGSSGGGGGSTGSG-NDVERSP--------AVWALRLARAVCHGSRLAARHVLYGGRGGILDAAQALLALGGXXXXXXXXVLAAAQCEALAVWHACLRYGLALEAAETVLPLAQ 550          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10953.833.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized2.040e-24182.95protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.670e-22571.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
RPAP1_C2.370e-1733.77domain-containing protein n=1 Tax=Tribonema minus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10953contigEcto-sp9_F_contig10953:202..3601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10953.833.1mRNA_Ecto-sp9_F_contig10953.833.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10953 202..3601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10953.833.1 ID=prot_Ecto-sp9_F_contig10953.833.1|Name=mRNA_Ecto-sp9_F_contig10953.833.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=525bp
QAFPCEPRPLCTPEEKQHLPPLKDNAIEEEGDETPGDVGEGEGGKTVREL
ARLCYEDPCRGLLEMALLPKMASVIKSYAGQVAADGAQAASDGGGGLGDK
GSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGL
LDAVREAFLEPRADGTLPLDLSETAAATPTMTATAIPKQLSPQEPATSRG
AGGRARRGGPRDANGCPPPPPQEQLALLAVRLARVLVQSGRGVALALSQT
PLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTV
VLVARGQGWWPGLSGGGGGGAAAAAPRVADAVTVERGEGGGGSSGGVGGS
VGEDPTAAAPVAAESVSADSGVGGVGGVGGVDVGVGGAQSSSGVAQSTSS
GASGGSRGGDSLPPRLAFYRALHQLACACVLPPGGNVAGRNKNDGAETAG
GDGKAGVGAAGAGVRKEAEGFSVGGVVVVPESWADVGDTVDTAVEAVLLW
LLSGVSGGGGRVGGGGAAETAQQVS
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