prot_Ecto-sp9_F_contig1095.830.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1095.830.1
Unique Nameprot_Ecto-sp9_F_contig1095.830.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length367
Homology
BLAST of mRNA_Ecto-sp9_F_contig1095.830.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF5_ECTSI)

HSP 1 Score: 647 bits (1669), Expect = 1.740e-233
Identity = 344/351 (98.01%), Postives = 345/351 (98.29%), Query Frame = 0
Query:   16 MRSSVASLLLLVSAANPLVGWCLLVRPAHTTTPSRRTSSSSSRSAADLLPTATGTPDGRRQRLYSFRTSTSRGYYTAEEQDHEAPPSSLRRIPNLAQLPSLVRDSNAVTTTTTAETVASLARQALATVALAAVLTPAVFIGEVTVSPLLAGKGGVAPPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGAGKGTVEYKGCGDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGTTLLYRGDVVQDAEAQGTALTVDTSGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIGEFEADLIELPSDDDKL 366
            MRSSVASLLLLVSAANPLVGWCLLVRPAH  T SRRTSSSSSRSAADLLPTATGTPDGRRQRLYS RTSTSRGYY AEEQDHEAPPSSLRRIPN A+LPSLVRDSNAVTTTTTAETVASLARQALATVALAAVLTPAVFIGEVTVSPLLAGKGGVAPPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGAGKGTVEYKGCGDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGTTLLYRGDVVQDAEAQGTALTVDTSGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIGEFEADLIELPSDDDKL
Sbjct:    1 MRSSVASLLLLVSAANPLVGWCLLVRPAHPIT-SRRTSSSSSRSAADLLPTATGTPDGRRQRLYSSRTSTSRGYYKAEEQDHEAPPSSLRRIPNHAELPSLVRDSNAVTTTTTAETVASLARQALATVALAAVLTPAVFIGEVTVSPLLAGKGGVAPPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGAGKGTVEYKGCGDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGTTLLYRGDVVQDAEAQGTALTVDTSGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIGEFEADLIELPSDDDKL 350          
BLAST of mRNA_Ecto-sp9_F_contig1095.830.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z999_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.870e-40
Identity = 95/195 (48.72%), Postives = 116/195 (59.49%), Query Frame = 0
Query:  176 AFAELEPLPL-KSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGA-GKGTVEYKGC-GDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGT-TLLYRGDVVQDAEAQGTALTVDTSGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIGEFEADLIELPSDDDKL 366
            A A LEPLP  KSY+++    + P+ T+RG+WR RE R   S             +C G+L+FKGFV   GKGTVEY    G+REGKG WL KP +I  G+I  SARW V +  G  + LYRGDVV D+          T    A G P    PDAHIRGEVL+P K   GSL EK IGEFEADL+++  D+DKL
Sbjct:   35 AHAALEPLPPPKSYTQQIVDAI-PIKTIRGVWRIREIREGES-------------LCKGKLTFKGFVDEPGKGTVEYVSSDGEREGKGYWLLKPGSITAGKILFSARWKVTYKGGGGSFLYRGDVVLDS----------TETLHAAGNP---HPDAHIRGEVLKPFKGRTGSLQEKHIGEFEADLLQVDKDEDKL 202          
BLAST of mRNA_Ecto-sp9_F_contig1095.830.1 vs.
Match: Uncharacterized (protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK28_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.140e-33
Identity = 85/216 (39.35%), Postives = 115/216 (53.24%), Query Frame = 0
Query:  153 VFIGEVTVSPLLAGKGGVAPPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGA-GKGTVEYKGCGDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGTTLLYRGDVVQDAEAQGTALTVDTSGAAAMGGPAFERPDAHIR-GEVLRPVKNIQGSLTEKKIGEFEADLIELPSDDDKL 366
            +F+G VT        G V   T A A  + +  +SY E+    + PV T+RG+WR RE R+    L            C GR+  +GFV    KGT+EY GC D +GKG WL KP  I NG+I  SARW V F+DG +L+YRGDV                    + G  + +  A I  GE+L+P   I G+L+EKK+G FEADLI++  D++KL
Sbjct:   92 IFLGGVT--------GNVGGHTEAQASDQVI-TQSYIEQVRDAI-PVKTIRGVWRIREYRDRDQPL------------CKGRIKMRGFVEEPNKGTLEYTGCNDGKGKGNWLLKPARIANGQIRFSARWKVRFSDGESLIYRGDV--------------------LAGGNYAKASASITDGEILKPFTGITGNLSEKKVGTFEADLIQVSDDEEKL 265          
BLAST of mRNA_Ecto-sp9_F_contig1095.830.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.350e-29
Identity = 77/193 (39.90%), Postives = 105/193 (54.40%), Query Frame = 0
Query:  176 AFAELEPL-PLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGAGKGTVEYKGCGDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGTTLLYRGDVVQDAEAQGTALTVDTSGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIG-EFEADLIELPSDDDKL 366
            A A LEPL P  SY  +    +  V  +RG+WR RE  +  + L            C G+L F GFV    GTV+Y+GC DR+G G+WL KP  I  G++  SARW + FTDGTTL+Y GD+              TSG         E+PD+ + GE+L PV N  G ++EK  G +F AD++E+ +D +KL
Sbjct:  107 ASAVLEPLEPPVSYQAQMRDAMQ-VAPIRGVWRIREYESKTAPL------------CKGQLKFDGFVDQMGGTVKYEGCNDRKGSGKWLLKPIRIQEGKVLYSARWKLKFTDGTTLIYVGDL-------------RTSGY------VTEKPDSTMSGEILIPVTNKAGIMSEKSSGGKFTADILEISTDTEKL 267          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1095.830.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized1.740e-23398.01protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF5... [more]
Uncharacterized3.870e-4048.72protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.140e-3339.35protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hypothetical7.350e-2939.90protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..366
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1095contigEcto-sp9_F_contig1095:17019..20497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1095.830.1mRNA_Ecto-sp9_F_contig1095.830.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1095 17019..20497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1095.830.1 ID=prot_Ecto-sp9_F_contig1095.830.1|Name=mRNA_Ecto-sp9_F_contig1095.830.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=367bp
HTHASAERRTPDRNVMRSSVASLLLLVSAANPLVGWCLLVRPAHTTTPSR
RTSSSSSRSAADLLPTATGTPDGRRQRLYSFRTSTSRGYYTAEEQDHEAP
PSSLRRIPNLAQLPSLVRDSNAVTTTTTAETVASLARQALATVALAAVLT
PAVFIGEVTVSPLLAGKGGVAPPTAAFAELEPLPLKSYSEEFSSGLAPVN
TVRGLWRTRETRNDGSALPQEAGRLGRKGICGGRLSFKGFVGAGKGTVEY
KGCGDREGKGRWLTKPKNIVNGRITLSARWSVNFTDGTTLLYRGDVVQDA
EAQGTALTVDTSGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIG
EFEADLIELPSDDDKL*
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