prot_Ecto-sp9_F_contig10919.802.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10919.802.1
Unique Nameprot_Ecto-sp9_F_contig10919.802.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length621
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10919.802.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI7_ECTSI)

HSP 1 Score: 852 bits (2202), Expect = 1.030e-294
Identity = 518/661 (78.37%), Postives = 525/661 (79.43%), Query Frame = 0 
Query:    1 QGVAHFCLVGAGDDGMGAVGQRKNTSSDLSGEAMGLRTVSNSKSDSPGRAGPVGEAGFLADRGGSGDMFSKPEGGFGRDGNSKEGGFFGGFSRALSRGYGHAAAAGKDGEEEIGREEDVQVTRLVLMLLQYNFPFISHVRGDMAAILEELSAQALAEKEGQHADNGDFHETLHGALIGADSDRVREQLMHISPEKTSKGLFAGLSKWSKKDDKGASAFYASKGGGLGSATAGSKGGK---------------------------------------AADGDDPASLAKKNAEATAASSRGRGGLGRRDTEDFYMVTKPQDHSPGAERKSSKRRLFGGVMDRFDSNNNNAHADGDAASSSSLPGAARKQPWLLSPGRSSREARQEAPGREPPAAAAAP-SSILEASAAAEGNPKKATATATATWTKPAARKRDTPDRLANFFGKILGVKDDALPDRPIDLPPGGGPADEATRARSPTTPGVAAAGATGAPSSAAXXXXXXXXXXGEPRASQSLISSSXXXXXXXXXXXXXXXXXXNTAETPLATAVYSATTVSAATADAMPVAVAVAVPLSDPAAPARRPSRSSRTHRXGXXXXXXXXGGSRSEGEAVLVAGTGRVVSILDWIAKEERENGGAVRVFSAQRVLDGKVQKRCRLAVSRKSLTQ 621
            QGVAHFCLVGAGDD M AVGQRKNTSSDLSGEAMGLRTVSNSKSDSPGRAG VGE GFLADRGGSGDMFSKPEGGFGRD NSKEGGFFGGFSRALSRGYGHAAAA KDGEEEIGREEDVQVTRLVLMLLQYNFPFISHVRGDMAAILEELSAQALAEKEGQHADNGDFHETLHGALIGADSDRVREQLMHISPEKT+KGLFAGLSKWSKKDDKGASA YAS+GGGLGSATAGSKGGK                                       AADGDDPASLAKKNA+ATAA SRGRGGLGRRDTEDFYMVTKPQDHSP AERKSSKRRLFGGVMDRFD N              SL GAARKQPWLLSPGRSSREARQEAPGREP A      SS+LEASAAAEG PKKATATAT  WTKPAARKRDTPDRLANFFGKILGVKDDALPDRPIDLPPGGG ADEATRARSPT PGVAAAGATGAPSS            GEPRAS+SL+SSS     XXXXXXXXXXXXX                                VPLSDPAAPARRPSRSSRTHR G        GGSRSEGE VLVAGTGRVVSI DWIAKEERENGGAVRVFSAQRVLDGKVQK+CRLAVSRKSLTQ
Sbjct:  450 QGVAHFCLVGAGDDDMAAVGQRKNTSSDLSGEAMGLRTVSNSKSDSPGRAGLVGETGFLADRGGSGDMFSKPEGGFGRDSNSKEGGFFGGFSRALSRGYGHAAAASKDGEEEIGREEDVQVTRLVLMLLQYNFPFISHVRGDMAAILEELSAQALAEKEGQHADNGDFHETLHGALIGADSDRVREQLMHISPEKTTKGLFAGLSKWSKKDDKGASALYASRGGGLGSATAGSKGGKDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAADGDDPASLAKKNADATAAPSRGRGGLGRRDTEDFYMVTKPQDHSPAAERKSSKRRLFGGVMDRFD-NXXXXXXXXXXXXXXSLAGAARKQPWLLSPGRSSREARQEAPGREPAAXXXXXXSSVLEASAAAEGKPKKATATAT--WTKPAARKRDTPDRLANFFGKILGVKDDALPDRPIDLPPGGGAADEATRARSPTAPGVAAAGATGAPSS------------GEPRASESLVSSSDAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXVPLSDPAAPARRPSRSSRTHRTGTAAAA---GGSRSEGEVVLVAGTGRVVSIRDWIAKEERENGGAVRVFSAQRVLDGKVQKKCRLAVSRKSLTQ 1090
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10919.802.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Rab-GAP1.030e-29478.37TBC domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10919contigEcto-sp9_F_contig10919:442..3874 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10919.802.1mRNA_Ecto-sp9_F_contig10919.802.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10919 442..3874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10919.802.1 ID=prot_Ecto-sp9_F_contig10919.802.1|Name=mRNA_Ecto-sp9_F_contig10919.802.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=621bp
QGVAHFCLVGAGDDGMGAVGQRKNTSSDLSGEAMGLRTVSNSKSDSPGRA
GPVGEAGFLADRGGSGDMFSKPEGGFGRDGNSKEGGFFGGFSRALSRGYG
HAAAAGKDGEEEIGREEDVQVTRLVLMLLQYNFPFISHVRGDMAAILEEL
SAQALAEKEGQHADNGDFHETLHGALIGADSDRVREQLMHISPEKTSKGL
FAGLSKWSKKDDKGASAFYASKGGGLGSATAGSKGGKAADGDDPASLAKK
NAEATAASSRGRGGLGRRDTEDFYMVTKPQDHSPGAERKSSKRRLFGGVM
DRFDSNNNNAHADGDAASSSSLPGAARKQPWLLSPGRSSREARQEAPGRE
PPAAAAAPSSILEASAAAEGNPKKATATATATWTKPAARKRDTPDRLANF
FGKILGVKDDALPDRPIDLPPGGGPADEATRARSPTTPGVAAAGATGAPS
SAAGGGATGAPSSGEPRASQSLISSSSDAAAGSGAAAAAAVAAANTAETP
LATAVYSATTVSAATADAMPVAVAVAVPLSDPAAPARRPSRSSRTHRTGA
AAAAAAAGGSRSEGEAVLVAGTGRVVSILDWIAKEERENGGAVRVFSAQR
VLDGKVQKRCRLAVSRKSLTQ
back to top