prot_Ecto-sp9_F_contig109.782.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig109.782.1
Unique Nameprot_Ecto-sp9_F_contig109.782.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length278
Homology
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G607_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 4.360e-140
Identity = 266/277 (96.03%), Postives = 269/277 (97.11%), Query Frame = 0
Query:    1 MFPRAVRACIVLSRRVLCSTTMMQRTLATSATAVAPGRILWSRAAVGAVLHQKRPLPRRQSTHTSPQQVLVGATAASASDQLPTAIRCPATCGRLQQHRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEGSLPSSSAPPSTSCHTVVKHPPAPGWEFPPVPAGCEATFAVIRLGNTQHKVTKDDVIVAEKLVGDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEISS 277
            MFPRAVRA IV SRRVLCSTTMMQRTLATSATAVAPGRILWSRAAVGAVLHQKRPLPRR+STHTSPQQVLVGATAASA DQLPTAIRCPAT GRLQQHRWQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VLE SLPSSSAPPSTSCHTVVKHPPAPGW+FPPVPAGCE TFAVIRLGNTQHKVTKDDVIVAEKLVGD+GTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEISS
Sbjct:    1 MFPRAVRASIVPSRRVLCSTTMMQRTLATSATAVAPGRILWSRAAVGAVLHQKRPLPRRRSTHTSPQQVLVGATAASAFDQLPTAIRCPATGGRLQQHRWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VLERSLPSSSAPPSTSCHTVVKHPPAPGWDFPPVPAGCEPTFAVIRLGNTQHKVTKDDVIVAEKLVGDVGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEISS 276          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Ribosomal (protein L21-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPR4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.170e-28
Identity = 67/125 (53.60%), Postives = 83/125 (66.40%), Query Frame = 0
Query:  153 TVVKHPPAPGWEFPPV-PAGCEATFAVIRLGNTQHKVTKDDVIVAEKLVG-DIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            T+V H    G   PP+ P GC   FAVI+LG TQ+KVT DDVI AEK+ G DIG  ++  DVLL+GT E T VGRPTVPGA V++ VEE T+D+KV             T+G RR+VT+LRV+EI
Sbjct:   58 TMVTHARPAGAPKPPIIPRGCAGRFAVIKLGGTQYKVTVDDVIAAEKVKGPDIGELIDVKDVLLLGTEERTWVGRPTVPGARVQMLVEEHTKDQKVVIFKMRRRKSSRRTRGFRRDVTVLRVMEI 182          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A813_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.390e-26
Identity = 68/111 (61.26%), Postives = 79/111 (71.17%), Query Frame = 0
Query:  167 PVPAGCEATFAVIRLGNTQHKVTKDDVIVAEKLVGDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEISS 277
            P PA     FA++RLG TQ+K+TKDDVIVAEKL   +G  L   +VLLVG+  +TVVGRPTVP ATV   VEEQTRD KV     XXXXXXX   GHRR VTLLRV++I +
Sbjct:   43 PAPASGGDRFAIVRLGGTQYKITKDDVIVAEKLDVQVGADLVIDEVLLVGSEAATVVGRPTVPRATVTCAVEEQTRDAKVVVFKKXXXXXXXXXNGHRRHVTLLRVLDIDA 153          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Aste57867_10640 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQY3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.660e-20
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 0
Query:  144 SAPPSTSCHTVVKHPPAPGWEFPPVPAGCEATFAVIRLGNTQHKVTKDDVIVAEKLVG-DIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            +AP  T  ++VV+HP         V AG    FAV++LG TQ KVT+ DV++AEK+VG  +G+ L+   VLL+G+   T+VGRP + GA V+  VEEQT D+K+               G+RRE+T+LRV  +
Sbjct:   32 AAPAKTVSYSVVRHPVNDATLAASVEAG--DVFAVVKLGATQFKVTQGDVVIAEKIVGAKVGSILDLDQVLLIGSPNQTIVGRPLIDGAVVQARVEEQTLDEKIDIFKKKRRKNYRRWNGYRREITVLRVTNV 162          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: 50s (ribosomal protein l21 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5C8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.360e-20
Identity = 65/142 (45.77%), Postives = 81/142 (57.04%), Query Frame = 0
Query:  145 APPSTSCHTVVKHPPAP--GWEFPPVP--------AGCEATFAVIRLGNTQHKVTKDDVIVAEKLVG-DIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            APP+   +T V HP     GW F  VP        AG EA FAVI + + Q+KVTKDD++V++K+ G + G      +V LVGT E TVVGRP V  A V+L VEEQ +D KV              QG RREVT+LRV+ I
Sbjct:   78 APPAGPKYTRVLHPTGKSRGWGFTRVPVDGEALASAGLEAKFAVIEVKSKQYKVTKDDIVVSDKIEGLEPGVIFACENVHLVGTPEYTVVGRPYVESARVRLQVEEQAKDAKVIIFKKKRRKNYRRKQGFRREVTILRVLGI 219          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV84_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.060e-18
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 0
Query:  176 FAVIRLGNTQHKVTKDDVIVAEKL------VGDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEIS 276
            FAVI LG TQ+K+T  D++ AE+L      V DIGTT++T  VLLVG  EST VG PTVP A V L VE+Q +D+K+              +G RR++T+LRVV+I+
Sbjct:  109 FAVIELGGTQYKITTGDLVYAERLYNSEGKVADIGTTMDTDKVLLVGGLESTAVGLPTVPNAKVTLRVEQQRQDEKIYIFKKRRRKNSKRKKGFRRQLTILRVVDIT 215          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIU8_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.450e-18
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 0
Query:  153 TVVKHPPAPGWEFPPVPAGCEATFAVIRLGNTQHKVTKDDVIVAEKLV-GDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            ++V+HP         V AG    FAVI+LG TQ KVT+ DV++AEK++   +GT ++  +VLL+G+   T+VGRP + GA V+  VEEQT DKK+               G+RREVT+LRV  +
Sbjct:   59 SIVRHPVNDATLIASVEAG--DVFAVIKLGATQFKVTQGDVVIAEKIIDAKVGTIMDIDEVLLIGSPNQTIVGRPFINGAIVQARVEEQTLDKKIDIFKKKRRKNYRRWNGYRREVTVLRVTNV 180          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Uncharacterized (protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BSX2_SAPPC)

HSP 1 Score: 87.8 bits (216), Expect = 1.030e-17
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 0
Query:  176 FAVIRLGNTQHKVTKDDVIVAEKLV-GDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            FAV++LG TQ+KVT+ DV++AEK++   +GT ++  +VLL+G+   T++GRP + GA V+  VEEQT D+K+               G+RR+VT+LRV E+
Sbjct:   56 FAVVKLGCTQYKVTQGDVVIAEKIIDAKVGTIMDLNEVLLIGSPNQTIIGRPFITGAKVQARVEEQTLDEKIDIFKKKRRKNYRRWNGYRRQVTVLRVTEV 156          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Ribosomal (protein L21 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZD3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.280e-17
Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0
Query:  153 TVVKHPPAPGWEFPPVPAGCEA--TFAVIRLGNTQHKVTKDDVIVAEKLV-GDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            +VV+HP        P+ A  EA   FAV++LG TQ KVT+ DV++AEK++   +G+ L+  +VLL+G+   T++GRP + GA V+  VEEQT DKK+               G RR+VT+LRV  +
Sbjct:   43 SVVRHP----VNDSPLTASLEAGDVFAVVKLGATQFKVTQGDVVIAEKIIDAKVGSILDLNEVLLIGSPNQTIIGRPFIDGAVVQARVEEQTLDKKIDIFKKKRRKNYRRWNGFRRQVTVLRVTNV 164          
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C0J3_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.420e-17
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 0
Query:  176 FAVIRLGNTQHKVTKDDVIVAEKLV-GDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEI 275
            FAV++LG TQ KVT+ D+++AEK++   +G+ L+  +VLL+G+   T++GRP V GA V+  VEEQT DKK+               G RREVT+LRV  +
Sbjct:   64 FAVVKLGGTQFKVTQGDIVIAEKIIDAKVGSILDLNEVLLIGSPNETIIGRPFVTGAVVQARVEEQTLDKKIDIFKKKRRKNYRRWNGFRREVTVLRVTNV 164          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig109.782.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized4.360e-14096.03protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G607... [more]
Ribosomal3.170e-2853.60protein L21-like protein n=1 Tax=Tribonema minus T... [more]
Hypothetical6.390e-2661.26protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Aste57867_106405.660e-2042.11protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
50s7.360e-2045.77ribosomal protein l21 n=2 Tax=Monodopsidaceae TaxI... [more]
Hypothetical2.060e-1848.60protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized3.450e-1842.74protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized1.030e-1743.56protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A... [more]
Ribosomal1.280e-1741.27protein L21 n=3 Tax=Aphanomyces TaxID=100860 RepID... [more]
Uncharacterized2.420e-1744.55protein n=2 Tax=Aphanomyces astaci TaxID=112090 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 176..275
e-value: 8.1E-28
score: 96.7
IPR028909Ribosomal protein L21-likePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 41..275
IPR001787Ribosomal protein L21TIGRFAMTIGR00061TIGR00061coord: 176..276
e-value: 9.5E-25
score: 84.9
IPR001787Ribosomal protein L21HAMAPMF_01363Ribosomal_L21coord: 175..277
score: 20.067
NoneNo IPR availablePANTHERPTHR21349:SF039S RIBOSOMAL PROTEIN L21, MITOCHONDRIALcoord: 41..275
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 246..268
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 176..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig109contigEcto-sp9_F_contig109:32810..36143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig109.782.1mRNA_Ecto-sp9_F_contig109.782.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig109 32810..36835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig109.782.1 ID=prot_Ecto-sp9_F_contig109.782.1|Name=mRNA_Ecto-sp9_F_contig109.782.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=278bp
MFPRAVRACIVLSRRVLCSTTMMQRTLATSATAVAPGRILWSRAAVGAVL
HQKRPLPRRQSTHTSPQQVLVGATAASASDQLPTAIRCPATCGRLQQHRW
QQQRQQRSSFSSQASEQEAHSSSSSSSSSRSSSAVLEGSLPSSSAPPSTS
CHTVVKHPPAPGWEFPPVPAGCEATFAVIRLGNTQHKVTKDDVIVAEKLV
GDIGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVIVLK
KRRRKSSKTTQGHRREVTLLRVVEISS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028909L21p-like
IPR001787Ribosomal_L21
IPR018258Ribosomal_L21_CS
IPR036164L21-like_sf