prot_Ecto-sp9_F_contig1077.670.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig1077.670.1
Unique Name	prot_Ecto-sp9_F_contig1077.670.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	234

Homology

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Z1_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 7.770e-161
Identity = 224/235 (95.32%), Postives = 229/235 (97.45%), Query Frame = 0

Query:    1 MTPPATSRAGGGRSTKPRRPVATGSGGMRVRAGALVWLSMAVQSRAFLVAPAVGGGVCRPRAGAGAARTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGK--VKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            MTPPATSRAGGGRSTKPRRPVATGSGGMR RAGALVWL MAVQSRAFLVAPAVGGGVCRPRA AGAARTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAET+HVTYVNKAGEEVASADVPVDRYI+FATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGK  VKQEGALGLLK+L+QEGYALTCCSYPKSDLVV+LQEEDDVYMKQFGNDFEGGGVEWGG FLDED
Sbjct:    1 MTPPATSRAGGGRSTKPRRPVATGSGGMRARAGALVWLLMAVQSRAFLVAPAVGGGVCRPRAAAGAARTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETHHVTYVNKAGEEVASADVPVDRYIFFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKARVKQEGALGLLKNLRQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGGVEWGGFFLDED 235

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: Ferredoxin (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.730e-70
Identity = 116/216 (53.70%), Postives = 148/216 (68.52%), Query Frame = 0

Query:   28 MRVRAGALVWLSMAVQSRAFLVAPAVGGGVCRPRAGAGAA---RTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETY-------HVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            MR   G++V LS+A   + F+ A    G +C   AG   A   +    +  MAYDV+YSPN W ++  + PG GGIWPGDP+A+T+        VT  NKAGE VA  DVP DRYIYFA ED G D+P+ N +RMCRNGCCTTCA+ V EGKVK EG LGLLKDL+++G+ LTCCSY  +D+ ++LQ+ED+VY+KQ+G  FE GGVEWGG   +ED
Sbjct:    1 MRWIGGSVVALSLASCCQGFVPAAVPAGRLCAAAAGPNTAARQKHPRHTCRMAYDVRYSPNSWPNQP-LEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 215

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.500e-65
Identity = 102/158 (64.56%), Postives = 123/158 (77.85%), Query Frame = 0

Query:   77 AYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETYHVTYVN-KAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            AYD + SPNKW     I PGFGG WPGDP+A T++V   N   GEEV   DVP DRYIYFA EDAG+++P+INK+R CRNGCCTTCAVK  EGK+K +  LGLLK++K++GY L CCSYP+SDLVV +Q+ED+VY KQ+G+ FE GGVEWGG FL ED
Sbjct:  100 AYDWRTSPNKWGRGIPIEPGFGGPWPGDPNAPTFNVKVRNVDTGEEV-EMDVPADRYIYFAFEDAGIELPLINKERACRNGCCTTCAVKTKEGKMKMDPQLGLLKEMKKQGYGLLCCSYPRSDLVVEVQKEDEVYRKQWGDTFESGGVEWGG-FLPED 255

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.550e-62
Identity = 95/155 (61.29%), Postives = 121/155 (78.06%), Query Frame = 0

Query:   80 VKYSPNKWW-DEDDIVPGFGGIWPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            ++ SPN+W  +   + PG GGIWPG PDA+ Y VT V+   +   + DVP DRYI+FA ED+GVD+P++N KRMCRNGCCTTCAVK+ EGKVK E ALGLL+D+K +GYAL+CCS P+SD+V  LQ+ED+VY++Q+G  FE GGVEWGG FL ED
Sbjct:   63 LQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGG-FLPED 216

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL42_HETAK)

HSP 1 Score: 190 bits (482), Expect = 3.340e-57
Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 0

Query:   68 RTSAASPLMA-YDVKYSPNKWWDEDDIV-PGFGGIWPGDPDAETYHVTYVN-KAGEEVASADVPVDRYIYFATEDAGVDVPIINKKR---MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            R S + PL A YD + SPNKW   D    PGFGG WPGDP+A  + VT  N   G EV    VP+DRYI+F  E+  + VPII+ +R   MCRNGCCTTCAVKV+EGKVKQ+  +GL+K+L++EGYAL CC+YP+SDLV+ +  ED+ Y+KQ+G  FE GGVEWGG FL ED
Sbjct:   50 RDSDSGPLFAKYDWRRSPNKWTVTDKPAEPGFGGPWPGDPNAPKFKVTVKNVDEGTEVTHM-VPIDRYIFFQFEEDDIPVPIISGQRGERMCRNGCCTTCAVKVVEGKVKQDAQIGLMKELRKEGYALMCCAYPRSDLVLEVTAEDECYIKQWGESFESGGVEWGG-FLPED 219

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: 2Fe-2S (iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T133_9ARCH)

HSP 1 Score: 181 bits (459), Expect = 5.540e-54
Identity = 86/148 (58.11%), Postives = 104/148 (70.27%), Query Frame = 0

Query:   87 WWDEDDIVPGFGGIWPGDPDAETYHVTYVNK-AGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            W       PG GGIWPGDP A+ Y VT  +K  GEE     VP DRYIYF  E+ GV++PI NK RMCR GCCT C VKV EGKVK +  LGLLK+ + +GYAL+CC+YPKSD+V  LQ+ED++Y+KQ+   FEGGGV WGGV  + D
Sbjct:   55 WAKRRGFKPGVGGIWPGDPSAKKYQVTVKSKKTGEEFVQM-VPEDRYIYFYFEEQGVELPIHNKARMCRQGCCTICTVKVSEGKVKMDAPLGLLKEFRNDGYALSCCAYPKSDVVCELQDEDEMYIKQWAEGFEGGGVIWGGVLPEHD 201

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: Ferredoxin ((2fe-2s) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUL4_9STRA)

HSP 1 Score: 176 bits (446), Expect = 8.570e-52
Identity = 80/132 (60.61%), Postives = 103/132 (78.03%), Query Frame = 0

Query:   80 VKYSPNKWW-DEDDIVPGFGGIWPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVY 210
            ++ SPN+W  +   + PG GGIWPG PDA+ Y VT V+   +   + DVP DRYI+FA ED+GVD+P++N KRMCRNGCCTTCAVK+ EGKVK E ALGLL+D+K +GYAL+CCS P+SD+V  LQ+ED+VY
Sbjct:   63 LQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVY 194

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: Hypothetical (protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER34_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 2.940e-46
Identity = 77/135 (57.04%), Postives = 97/135 (71.85%), Query Frame = 0

Query:   99 GIWPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED 233
            G  PGD +A+ Y VT  + A     S +VPVDRYI+ + E+ G D+P       CR+GCCTTCAV++ +G V QE ALGL+K L+++GYAL C SYP+SDLV  LQ+ D+VY+KQFGN FE GG EWGGVFLDED
Sbjct:   40 GNLPGDVNAKKYKVTIKDPAKNVTHSVEVPVDRYIWHSMEEQGYDIPA-----SCRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFESGGKEWGGVFLDED 169

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELQ0_VITBC)

HSP 1 Score: 161 bits (408), Expect = 2.910e-45
Identity = 75/141 (53.19%), Postives = 102/141 (72.34%), Query Frame = 0

Query:   79 DVKYSPNKWWDEDDIVPGFGGIWPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFE 219
            D   +P KW   D I P  GG WPGDP+A+TY VT ++    E  + DVP DRYI+F+ E++    PI N K+MCRNGCCTTCAV+V EG+VK +  +GL +++++ GYALTC SYP+SD+V+ LQ+ED+VY KQFG+ F+
Sbjct:  129 DADDTPMKWEMGDRIKPYKGGPWPGDPNAKTYKVTIIDPVSGERHTQDVPEDRYIFFSFEESRNLPPIKNIKKMCRNGCCTTCAVRVREGEVKMDPQIGLTREMERAGYALTCVSYPRSDVVLELQDEDEVYKKQFGDTFD 269

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BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HZN2_9ALVE)

HSP 1 Score: 157 bits (398), Expect = 3.720e-44
Identity = 72/149 (48.32%), Postives = 105/149 (70.47%), Query Frame = 0

Query:   78 YDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLVVRLQEEDDVYMKQFGNDFEGGGVEWG 226
            +D+  SP +W  +  +VP  GG +PGDPDA+ Y+VT ++    E  S DV  DRYI+FA E+AG+ +PI N K+MCRNGCCTTC V++ EG V+ +  +GL+K++ + GY L+C S P+SD+V   Q+ED+VY+KQ+   FE G V++G
Sbjct:   98 FDLNKSPMRWQGQT-LVPPKGGAFPGDPDAKKYNVTLIDSKTGESYSLDVAEDRYIFFAFEEAGIKLPIRNIKKMCRNGCCTTCTVRMREGDVEMDPQIGLVKEMTKNGYRLSCVSMPRSDVVAEFQDEDEVYVKQWAESFEKGKVDFG 245

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1077.670.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
2Fe-2S	7.770e-161	95.32	ferredoxin-type domain-containing protein n=2 Tax=...	[more]
Ferredoxin	2.730e-70	53.70	n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z...	[more]
Hypothetical	3.500e-65	64.56	protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re...	[more]
2Fe-2S	1.550e-62	61.29	ferredoxin-type domain-containing protein n=1 Tax=...	[more]
Hypothetical	3.340e-57	57.56	protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re...	[more]
2Fe-2S	5.540e-54	58.11	iron-sulfur cluster binding domain-containing prot...	[more]
Ferredoxin	8.570e-52	60.61	(2fe-2s) n=1 Tax=Nannochloropsis gaditana TaxID=72...	[more]
Hypothetical	2.940e-46	57.04	protein n=1 Tax=Timspurckia oligopyrenoides TaxID=...	[more]
2Fe-2S	2.910e-45	53.19	ferredoxin-type domain-containing protein n=1 Tax=...	[more]
2Fe-2S	3.720e-44	48.32	ferredoxin-type domain-containing protein n=1 Tax=...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 107..217 e-value: 2.1E-22 score: 80.7
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 146..196 e-value: 2.5E-9 score: 36.9
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 110..207 score: 9.612
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 105..223
None	No IPR available	PANTHER	PTHR43112:SF10	FERREDOXIN C 2, CHLOROPLASTIC	coord: 105..223
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 102..211

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1077	contig	Ecto-sp9_F_contig1077:1959..5396 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1077.670.1	mRNA_Ecto-sp9_F_contig1077.670.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig1077 1915..6172 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig1077.670.1 ID=prot_Ecto-sp9_F_contig1077.670.1|Name=mRNA_Ecto-sp9_F_contig1077.670.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=234bp
MTPPATSRAGGGRSTKPRRPVATGSGGMRVRAGALVWLSMAVQSRAFLVA
PAVGGGVCRPRAGAGAARTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGI
WPGDPDAETYHVTYVNKAGEEVASADVPVDRYIYFATEDAGVDVPIINKK
RMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKQEGYALTCCSYPKSDLV
VRLQEEDDVYMKQFGNDFEGGGVEWGGVFLDED*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR036010	2Fe-2S_ferredoxin-like_sf