prot_Ecto-sp9_F_contig1075.652.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1075.652.1
Unique Nameprot_Ecto-sp9_F_contig1075.652.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length512
Homology
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 6.330e-36
Identity = 83/114 (72.81%), Postives = 87/114 (76.32%), Query Frame = 0
Query:    3 RACRSTSILHVRVTDQTPGSLWCRRTTQTPPNTSRSSVLVSGRVPAVRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIENVS 116
            RACRSTSILH R                  PNTS+S+V VSGR PAV ALHLTWALPME+LLRTAAIELWTWSE LELQGSLCAASL SANWWPR LTQLVL+ADLDI  ENVS
Sbjct: 1086 RACRSTSILHTR------------------PNTSKSAVPVSGRAPAVWALHLTWALPMESLLRTAAIELWTWSECLELQGSLCAASLRSANWWPRRLTQLVLKADLDILTENVS 1181          
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.620e-35
Identity = 78/115 (67.83%), Postives = 85/115 (73.91%), Query Frame = 0
Query:    1 MCRACRSTSILHVRVTDQTPGSLWCRRTTQTPPNTSRSSVLVSGRVPAVRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIENV 115
            +CRACR+TSILHV V DQTP SLW  RT QT PNT   ++ +S RVP VRAL LTWAL ME LLR AAIELWTWSE LEL GS C +SLGS   WPRGLTQLVL  D DI +  V
Sbjct:   44 LCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTV 158          
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.780e-33
Identity = 73/114 (64.04%), Postives = 80/114 (70.18%), Query Frame = 0
Query:    1 MCRACRSTSILHVRVTDQTPGSLWCRRTTQTPPNTSRSSVLVSGRVPAVRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIEN 114
            +CRACRST  LHVRVT  TP SLW   T Q  PNT  S V V  RVP VRAL LTWA  METL++ AAIELW+ SE LE+ G LCAASLGS  W P GLTQLVL+ D  IP+E 
Sbjct:   42 ICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVW-PLGLTQLVLDTDFHIPMEK 154          
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 6.770e-18
Identity = 57/131 (43.51%), Postives = 71/131 (54.20%), Query Frame = 0
Query:    2 CRACRSTSILHVRVTDQTPGSLWCRRTTQTPPNTSRSSVLVSGRVPAVRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIENVSWPVRVQCLALLGGFDQ 132
            C ACR    LHVRV  QTP SLW    +            VS RVPAV+A  LTWAL ME LL+T+A+EL + S+Y  + G+   ASLGS  W    L +LV ++D+  P    SWP  +  L     FDQ
Sbjct:   51 CGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDM--PASTASWPASLPQLLFGDRFDQ 179          
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.080e-9
Identity = 54/137 (39.42%), Postives = 68/137 (49.64%), Query Frame = 0
Query:   25 CRRTTQTPPNTSRSSVLVSG--RVPAVRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIENVSWPVRVQCLALLGGFDQPIVGTPIAGVVWPASLRKLSFGWRFNQ 159
            CRR   T  +TS    LVSG  R P VRA  LTWAL M+ LL++ A+EL   S+Y    G   AA+L S  W  R L +LVLE D                             TP+    WPASL++LSFG++FN+
Sbjct:   56 CRRV-PTSHSTSTVGRLVSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQR-LKRLVLELD-----------------------------TPVITASWPASLQQLSFGYKFNK 161          
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K7_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.280e-7
Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 0
Query:   44 GRVPAVRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIENVSWPVRVQCLALLGGFDQPI 134
             RVP V+A  L   LP E LL+++AIEL + S +  ++G   AASLGS +W  + L  LVLE  LD P    SW   +Q L+    F+QP+
Sbjct:    2 SRVPGVQAFGLLLGLPTEVLLQSSAIELGSGSGHQHMKGHASAASLGSMSWLKK-LNWLVLE--LDTPANKTSWAASLQQLSFGDCFNQPL 89          
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ66_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.200e-5
Identity = 42/111 (37.84%), Postives = 55/111 (49.55%), Query Frame = 0
Query:   49 VRALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLTQLVLEADLDIPIENVSWPVRVQCLALLGGFDQPIVGTPIAGVVWPASLRKLSFGWRFNQ 159
            ++A  LTWALPME LL+++AIE  + SEY   +G   AASLGS  W             L +P   V              F+   V  P++   WPA L++LSFG  FNQ
Sbjct:    1 MQAFGLTWALPMEVLLQSSAIEQPSGSEYRHTKGHTSAASLGSMCW-------------LQVPKRMV--------------FE---VDKPVSMAPWPACLQQLSFGDHFNQ 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1075.652.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Uncharacterized6.330e-3672.81protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.620e-3567.83protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.780e-3364.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.770e-1843.51protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.080e-939.42protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.280e-742.86protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.200e-537.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 136..329
e-value: 2.4E-6
score: 28.2
IPR008615FNIPPFAMPF05725FNIPcoord: 377..420
e-value: 2.5E-6
score: 27.5
coord: 145..176
e-value: 1.3E-4
score: 22.0
coord: 223..265
e-value: 2.6E-6
score: 27.5
coord: 179..220
e-value: 5.2E-5
score: 23.3
coord: 333..375
e-value: 4.6E-7
score: 29.9
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 138..307
coord: 96..241
coord: 233..327
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 138..307
coord: 96..241
coord: 233..327
coord: 333..504
coord: 299..429
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 333..504
coord: 299..429
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 122..459

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1075contigEcto-sp9_F_contig1075:7118..8836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1075.652.1mRNA_Ecto-sp9_F_contig1075.652.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1075 7007..9210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1075.652.1 ID=prot_Ecto-sp9_F_contig1075.652.1|Name=mRNA_Ecto-sp9_F_contig1075.652.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=512bp
MCRACRSTSILHVRVTDQTPGSLWCRRTTQTPPNTSRSSVLVSGRVPAVR
ALHLTWALPMETLLRTAAIELWTWSEYLELQGSLCAASLGSANWWPRGLT
QLVLEADLDIPIENVSWPVRVQCLALLGGFDQPIVGTPIAGVVWPASLRK
LSFGWRFNQPIAGVVWPASLQQLSFGGRFNQYLARVTWPVSLQKLSFSFN
FNQPIAGVVWPASLQELSLGRLFNQPIAGVVWPSSLQNLSFGETFNQSIA
GVVWPAPLQQLSFGDYFNQPIGGVVWPASLQQLSFGNSFNQPVAGVLWPA
LVQQLSFGDSFDQPIAGVVWSASLQQLSLGWAFNQPIGEVVWPASHQQLS
FGDSFNQPIAGVVWPASLKQLSFGYIFNQPVSGVAWSSSLQQLSFGDSFN
QPIAGVVWPASLTLLSFGNDFNQPVAGVLWPAFLQQLSFGDSFDQTIAGV
VWSASLQELSFGWKFNQPVAGVVWPALLQKLSFGLSFKQPIAGVVWPRSL
RRVTRNGKSLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP