prot_Ecto-sp9_F_contig10592.537.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10592.537.1
Unique Nameprot_Ecto-sp9_F_contig10592.537.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length408
Homology
BLAST of mRNA_Ecto-sp9_F_contig10592.537.1 vs.
Match: Dymeclin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU0_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 1.210e-148
Identity = 282/293 (96.25%), Postives = 284/293 (96.93%), Query Frame = 0
Query:    1 RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVAVLVAASRRWIQGATSAAAAAMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVVSENGRDPMAAPPGGAIPEVGGVRGGLSDVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQAALDAICAHPALAATGWAGGLPRLLAHFQDLARQREEDGGGTGLTAESAMETVRKGVRHYTTEALGMGHNGGGDAAEDGXXXXXXXXXXXXXXXXXXVTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPAK 293
            RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVAVLVAASRRWIQGATSAAA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVVSENGRDPMAAPPGGA+PEVGG RGGLSDVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQAALDAICAHPALAATGWAGGLPRLLAHFQDLARQREED GGTGLTAESAMETV+KGVRHYTTEALGMGHNGGGDAAEDGXXXXXXXXXXXXXXXX  VTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPAK
Sbjct:  365 RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVAVLVAASRRWIQGATSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVVSENGRDPMAAPPGGAMPEVGGGRGGLSDVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQAALDAICAHPALAATGWAGGLPRLLAHFQDLARQREEDEGGTGLTAESAMETVKKGVRHYTTEALGMGHNGGGDAAEDGXXXXXXXXXXXXXXXXEGVTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPAK 657          
BLAST of mRNA_Ecto-sp9_F_contig10592.537.1 vs.
Match: Dymeclin (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B7_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 3.550e-115
Identity = 242/304 (79.61%), Postives = 244/304 (80.26%), Query Frame = 0
Query:    1 RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVAVLVAASRRWIQGATSAAAAAMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVVSENGRDPMAAPPGGAIPEVGGVRGGLSDVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQA--ALDAICAHPALAATGWAGGLPRLLAHFQDLARQREEDGGGTGLTAESAMETVRKGVRHYTTEALGMGHNGGGDAAEDGXXXXXXXXXXXXXXXXXXVTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPAKVRMFSSPSS 302
            RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLV VLVAASRRWIQGATSAA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               DVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQA  ALDAIC HPALAATGWAG LPRLLAHFQDLARQREEDGGGTGLTAESAMETV+KGVRHYTTEALG GHNGGGDAAEDG   X              VTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPA+VRMFSSPSS
Sbjct:  802 RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVTVLVAASRRWIQGATSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------------------DVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQACAALDAICTHPALAATGWAGDLPRLLAHFQDLARQREEDGGGTGLTAESAMETVKKGVRHYTTEALGKGHNGGGDAAEDGRGGXGGEG----------VTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPARVRMFSSPSS 1069          
BLAST of mRNA_Ecto-sp9_F_contig10592.537.1 vs.
Match: Dymeclin (n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGG4_FISSO)

HSP 1 Score: 64.3 bits (155), Expect = 2.320e-7
Identity = 71/304 (23.36%), Postives = 108/304 (35.53%), Query Frame = 0
Query:    1 RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVAVLVAASRRWIQGATSAAAAAMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVVSENGRDPMAAPPGGAIPEVGGVRGGLSDVQELCGEVARVLFLFVWSCTRPRRLGSNVELLYALLHEQAALDAICAHPALAATGWAGGLPRLLAHFQDL-----ARQREEDGGGTGLTAESAMETVRKGVRHYTTEALGMGHNGGGDAAEDGXXXXXXXXXXXXXXXXXXVTLVYEEGEHSEAFFLPYLWEVLLS--RTPDLNWSPAKVRMF 297
            RL D +LL NC AVL+NLAP    L  YAA RL AV VA  +R+ +                                             +V EN  D                   LS  + + GEVAR L   +  C   + +  N+ L+YAL++ Q     +           + G P   + +  +     A +R  D G    TA  A++ +   + H  T       +    + ED                       YEE    E FF+PY+WE+++S   +  + W   K+++F
Sbjct:  621 RLHDPFLLSNCCAVLLNLAPSVVELHDYAAMRLSAVAVACIKRYAE---------------------------------------------LVVENPNDDEED---------------LSSPRAMHGEVARTLLQVIRHCVGSKNIDRNLHLIYALVYHQTDFKKVFT---------SNGCPFRKSEYSSIQKVIDAAKRIIDEGDDARTAAKALKVL---LDHTETLKQVATDSKRRSSTED--------------------LFTYEEESDPEVFFVPYVWEIIVSVVTSSSIEWDTDKIKVF 832          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10592.537.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Dymeclin1.210e-14896.25n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Dymeclin3.550e-11579.61n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 R... [more]
Dymeclin2.320e-723.36n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF09742Dymeclincoord: 1..279
e-value: 3.3E-21
score: 75.4
IPR019142DymeclinPANTHERPTHR12895FAMILY NOT NAMEDcoord: 1..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10592contigEcto-sp9_F_contig10592:957..4423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10592.537.1mRNA_Ecto-sp9_F_contig10592.537.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10592 957..4423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10592.537.1 ID=prot_Ecto-sp9_F_contig10592.537.1|Name=mRNA_Ecto-sp9_F_contig10592.537.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=408bp
RLKDGYLLENCLAVLVNLAPQAEHLQPYAAERLVAVLVAASRRWIQGATS
AAAAAMTAQAAAATKAGQGAGAGRQPGGAGGAGAGGGNGGAVVSENGRDP
MAAPPGGAIPEVGGVRGGLSDVQELCGEVARVLFLFVWSCTRPRRLGSNV
ELLYALLHEQAALDAICAHPALAATGWAGGLPRLLAHFQDLARQREEDGG
GTGLTAESAMETVRKGVRHYTTEALGMGHNGGGDAAEDGRGGGGGGVEDG
EADGGEGVTLVYEEGEHSEAFFLPYLWEVLLSRTPDLNWSPAKVRMFSSP
SSCSKTSTTAETQAANDPSPPAAEASAAGGPVRGSPPAAGGGMGGRAPQQ
GADASGGGAWAGVSSPADQGEELSLLPPTVPKLTTPPTSAVVGGWWGWGR
GGGGAGRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019142Dymeclin