prot_Ecto-sp9_F_contig1053.496.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1053.496.1
Unique Nameprot_Ecto-sp9_F_contig1053.496.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length653
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1053.496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI5_ECTSI)

HSP 1 Score: 840 bits (2170), Expect = 3.400e-300
Identity = 565/652 (86.66%), Postives = 569/652 (87.27%), Query Frame = 0 
Query:    1 MALAVADNAVQPHTDHKLPEQQDSPNPKDXXXXXXPVFGSVPAALLPCDRTTMAGGLDSISYGNVGGGRALLPVPTRRGLDSSPALFLWESRTTTVDVMSVSNTTRPVVVSSSRNSERRRIQVVLPYGVGSGAAGGVAGNGRGQRGGSASGRAGAAGTMMSLLDPPNPTALEARLNEDRRLKRGRDLRRERHAFLSRLTREREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASEGTAWGQGRGATXXXXXXXXXXXXXXXXXXXXXXXRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRRWSSASRIQNCWRAYRKRMGWRELESEASCPFCRATVMDRAAAKIQARWRGVACRMGIARKATDDALGKRRMVSAVTIQAAARRRAAIVRYGSKLTLGAARREREARSAAEAARPRRRWNRGAGAGGTTGXXXXXXXAATSEGGEVARGRAQPARGGETGDREAAXXXXXXXXXGSGVGRDKESPTTAAATRNAGGKGRVAARPPTSKIQLLELQQEDQQQKHGGPAHGSETGLSNQKAGLSPPGVGSADGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFVQESIQAAVVSARKHSVEGTGSQ 652
            M LAVADNAVQPHTD KLPEQQDSPNPKDXXXXXXPVFGSVPAALLPCDRTTMAGGLDSISYGNV GGRA LPVPTRRGLDSSPALFLWESRTTTVDVMSVSNTTRPVVVSSSRNSERRRIQVVLPYGVGSGAAGG            ASGRAGA GTMMSLLDPPNPTALEARLNE+RRLKRGRDLRRERHAFLSRLT+EREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRK SEGTAWGQGR   XXXXXXXXXXXXXXXXXXXXXXXRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRR SSASRIQNCWRAYRKRMGWRELESE         VMDRAAAKIQARWRGVACRMG+ARKATDDALGKRRMVSAVTIQAAARRRAAIVRYGSKLTLGAARREREARSAA                    XXXXXX AATSEGGE ARGRAQPARG ETGDREAA  XXXXXXX                      KGR AARPPTSKI+LLELQQEDQQQKHGGPAHGSETGLSN K GLSP GVGSADG XXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFVQESIQAAVVSARKHSVEGTGSQ
Sbjct:    1 MPLAVADNAVQPHTDRKLPEQQDSPNPKDXXXXXXPVFGSVPAALLPCDRTTMAGGLDSISYGNVVGGRAPLPVPTRRGLDSSPALFLWESRTTTVDVMSVSNTTRPVVVSSSRNSERRRIQVVLPYGVGSGAAGGXXXXXXXXXXXXASGRAGATGTMMSLLDPPNPTALEARLNENRRLKRGRDLRRERHAFLSRLTQEREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKTSEGTAWGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRRRSSASRIQNCWRAYRKRMGWRELESE---------VMDRAAAKIQARWRGVACRMGLARKATDDALGKRRMVSAVTIQAAARRRAAIVRYGSKLTLGAARREREARSAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAATSEGGESARGRAQPARGVETGDREAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRGAARPPTSKIKLLELQQEDQQQKHGGPAHGSETGLSNLKVGLSPTGVGSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFVQESIQAAVVSARKHSVEGTGSQ 643
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BLAST of mRNA_Ecto-sp9_F_contig1053.496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z3_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 7.760e-118
Identity = 205/220 (93.18%), Postives = 206/220 (93.64%), Query Frame = 0 
Query:  159 MMSLLDPPNPTALEARLNEDRRLKRGRDLRRERHAFLSRLTREREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASEGTAWGQGRGATXXXXXXXXXXXXXXXXXXXXXXXRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRRWSSASRIQNCWRAYRKRMGWRELESEASCPF 378
            MMSLLDPPNPTALEARLNEDRR KRGR+LR ERHAFLSRLTREREERVLLEAWAASTIQALFRGFL RPRP RPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASEGTAWGQGRGAT XXXXXXXXXXXXXX        RQRAFEDEMSTRIT VVRGFLERRRFGRRWAVWDRKRRWSSASRIQNCWRAYRKRMGWRELESEASCPF
Sbjct:    1 MMSLLDPPNPTALEARLNEDRRAKRGRNLRLERHAFLSRLTREREERVLLEAWAASTIQALFRGFLTRPRPKRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASEGTAWGQGRGATSXXXXXXXXXXXXXXLKRSRSR-RQRAFEDEMSTRITSVVRGFLERRRFGRRWAVWDRKRRWSSASRIQNCWRAYRKRMGWRELESEASCPF 219
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BLAST of mRNA_Ecto-sp9_F_contig1053.496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDY1_PHYRM)

HSP 1 Score: 58.2 bits (139), Expect = 1.890e-5
Identity = 46/101 (45.54%), Postives = 59/101 (58.42%), Query Frame = 0 
Query:  185 RDLRRERHAFLSRLTREREERVLLEAWAASTIQALFRGFLARPRP---PRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASEGTAWGQG 282
            R+L  ER AF++RLTRERE++  LE+WAA+ IQA +RGF +RPR     R   +  L  A S R  +AD+Q  L   G  T+P  G  G K  E   W QG
Sbjct:   56 RELLLERDAFMARLTREREDKAQLESWAATRIQACYRGFHSRPRAVAYARRLNKFALRSASSIRLDLADMQENLRMRG--TLPDEGESGGK--EMLLWRQG 152
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1053.496.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized3.400e-30086.66protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.760e-11893.18protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.890e-545.54protein n=1 Tax=Phytophthora ramorum TaxID=164328 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 314..336
e-value: 36.0
score: 9.1
coord: 346..368
e-value: 57.0
score: 7.4
coord: 416..438
e-value: 180.0
score: 3.3
coord: 383..405
e-value: 7.3
score: 14.8
coord: 208..230
e-value: 39.0
score: 8.8
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 211..226
e-value: 0.0083
score: 15.8
coord: 386..401
e-value: 0.2
score: 11.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 209..237
score: 7.986
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 315..344
score: 6.595
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 384..412
score: 7.272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1053contigEcto-sp9_F_contig1053:15794..19108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1053.496.1mRNA_Ecto-sp9_F_contig1053.496.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1053 15794..19108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1053.496.1 ID=prot_Ecto-sp9_F_contig1053.496.1|Name=mRNA_Ecto-sp9_F_contig1053.496.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=653bp
MALAVADNAVQPHTDHKLPEQQDSPNPKDPSDPNDPVFGSVPAALLPCDR
TTMAGGLDSISYGNVGGGRALLPVPTRRGLDSSPALFLWESRTTTVDVMS
VSNTTRPVVVSSSRNSERRRIQVVLPYGVGSGAAGGVAGNGRGQRGGSAS
GRAGAAGTMMSLLDPPNPTALEARLNEDRRLKRGRDLRRERHAFLSRLTR
EREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVAD
LQAILARAGLPTIPGLGPDGRKASEGTAWGQGRGATSGHGGGGGTAGAGG
RGLKRSRSRRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRRWSS
ASRIQNCWRAYRKRMGWRELESEASCPFCRATVMDRAAAKIQARWRGVAC
RMGIARKATDDALGKRRMVSAVTIQAAARRRAAIVRYGSKLTLGAARRER
EARSAAEAARPRRRWNRGAGAGGTTGAAAGTAAAATSEGGEVARGRAQPA
RGGETGDREAAAAVVGAAAAGSGVGRDKESPTTAAATRNAGGKGRVAARP
PTSKIQLLELQQEDQQQKHGGPAHGSETGLSNQKAGLSPPGVGSADGSGG
DSGGTDEGLSGGLSSDVRKRASQEASLQFVQESIQAAVVSARKHSVEGTG
SQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS