prot_Ecto-sp9_F_contig1045.431.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1045.431.1
Unique Nameprot_Ecto-sp9_F_contig1045.431.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length155
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1045.431.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 5.470e-5
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:    3 RTRLLLARAEADRTWRRRSWLIMVRSRASKTTANDETSGKGGGDSNESAGRAKDNCKVAKSE 64
            R RLLLARA A+R WR R WL+M+RS A    AN + +G    DSN++  R    CK A+ E
Sbjct:  340 RVRLLLARAPANRAWRHRCWLVMLRSCAKTARANSDATGDADEDSNDARDRKVGKCKGARRE 401
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1045.431.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Ankyrin5.470e-548.39repeat protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1045contigEcto-sp9_F_contig1045:26631..27095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1045.431.1mRNA_Ecto-sp9_F_contig1045.431.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1045 26528..27263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1045.431.1 ID=prot_Ecto-sp9_F_contig1045.431.1|Name=mRNA_Ecto-sp9_F_contig1045.431.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=155bp
MRRTRLLLARAEADRTWRRRSWLIMVRSRASKTTANDETSGKGGGDSNES
AGRAKDNCKVAKSEGATGSVIQDVSGQAPNGGSGGGVGAKGADLSTWWRC
WWGLSWRACSVQSWVFFERGSKMKSLEALVRSEVLPQALVASDPGLSWVL
GVCW*
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