prot_Ecto-sp9_F_contig1041.402.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1041.402.1
Unique Nameprot_Ecto-sp9_F_contig1041.402.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length551
Homology
BLAST of mRNA_Ecto-sp9_F_contig1041.402.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSZ1_ECTSI)

HSP 1 Score: 984 bits (2543), Expect = 0.000e+0
Identity = 524/549 (95.45%), Postives = 533/549 (97.09%), Query Frame = 0
Query:    2 FTPKILEMAEKTSFGGLATAKGVRAGTAFSTVANVLRPDTVELANGGRGRGEADNVIRQMQANAAEELLSGGMGFQKRRLEVPDEDVELFVEQVLAGLVVVGETLTTSIGFRLIRCNYVKSSTEAAELSRTVKSRMAEMGLDAKVAAFLTWDVIAAFDSMENMGKEIEDLESQAAMMGDDDEQLAKVFNTLGAGLSLMGPQDEKMFVLIPAETKPNEDTQANEQGRTALALGAPITLFAFLGDVFNGSPYEVANGAVDGDVQLLTQIGLLGLIMAGLLLSRDIARTAAAKLVGVELEAPVLLPSFETGLLATKRPVASFPSTSQDLFDIAIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDGEAAIETLDTNFKYNAIVTPLAYLFAVSQIIGGGMFLLSVLLVNFIAYPESAPLMREDNVTPVRSPARLALGVIVAAVSLAVLSPMTISSFLTGGPLSMDTGAGAESVAAGLGVGGIGFHGFL 550
            FTPK++EMAEKT FG L TAKGVRAGTAFS VA+VLR DTVELANGGRG+GEADNVIRQMQANAAEELLSGGMGFQKRRLEVPDEDVELFVEQVLAGLVVVGETLTT IGFRLIRCNYVKSS EAAELSRTVKSRMAEMGLDAKVAAFLTWDVI AFDSMENMG+EIEDLESQAAMM DDDEQLAK FNT+GAG SLMGPQDEKMFVLIPAETKPNEDTQANEQGRTALALGAPITLFAFLGDVFNGSPYE ANGAVDGDVQLLTQIGLLGLIMAGLLLSRDIART AAKLV VELEAPVLLPSFETGLLA KRPVASFPSTSQDLFD+AIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDGEA I+TLDTNFKYNAIVTPLAYLFAVSQIIGGGMFLLSVLLVNFIAYPESAPLMREDNVTPVRSPARLALGV+VAAVSLAVLSPMTISSFLTGGPLSMDTGAGAESVAAGLGVGGIGFHGFL
Sbjct:  127 FTPKMMEMAEKTPFGALTTAKGVRAGTAFSAVADVLRADTVELANGGRGKGEADNVIRQMQANAAEELLSGGMGFQKRRLEVPDEDVELFVEQVLAGLVVVGETLTTPIGFRLIRCNYVKSSMEAAELSRTVKSRMAEMGLDAKVAAFLTWDVIGAFDSMENMGREIEDLESQAAMM-DDDEQLAKAFNTIGAGFSLMGPQDEKMFVLIPAETKPNEDTQANEQGRTALALGAPITLFAFLGDVFNGSPYEAANGAVDGDVQLLTQIGLLGLIMAGLLLSRDIARTVAAKLVRVELEAPVLLPSFETGLLAAKRPVASFPSTSQDLFDVAIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDGEAVIDTLDTNFKYNAIVTPLAYLFAVSQIIGGGMFLLSVLLVNFIAYPESAPLMREDNVTPVRSPARLALGVVVAAVSLAVLSPMTISSFLTGGPLSMDTGAGAESVAAGLGVGGIGFHGFL 674          
BLAST of mRNA_Ecto-sp9_F_contig1041.402.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJJ3_THAOC)

HSP 1 Score: 89.7 bits (221), Expect = 4.630e-15
Identity = 92/316 (29.11%), Postives = 147/316 (46.52%), Query Frame = 0
Query:  147 AAFLTWDVIAAFDSMENMGKEIEDLESQAAMMGDDDEQLAKVFNTLGAGLSLMGPQDEKMFVLIPAETKPNEDTQANEQGRTALALGAPITLFAFLGDVFNGSPYEVANGAVDGDVQLLTQIGLLGLIMAGLLLSRDIARTAAAKLVGVELEAPVLLPSFETGLLATKRPV-ASFPSTSQDLFDIAIAGPTVGFATAAAALVMGLQMTA-AAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTN--LAVQDLA-VERVAMHPLAVGGVAGMLWTAATVLPLPG-SDGEAAIETLDTNFKYNAIVTPLAYLFAVSQ 456
            + FL  D +A  D+M        D++ Q+    D   ++AK F+ L          +    +++P + +P     A  + R A++  A   + +F+G  + G          DG V  LT    + L +  L  +  +     A L GVEL  P L PS + GLL T  PV  + P  ++ LFD+A AGP +GFA + + L+ GL +T+     +  +  P +    L+ SSL  + V+ FL T+  L++  +A V  VA+HPL V G  G++ +A  +LP    SDG   I    +       V+P   LF + Q
Sbjct:  477 SVFLDNDSVAIVDAMTA------DIDDQSDSALDKITKMAKNFDEL----------EPTSLLVLPKDLRPEP---AMWEVRGAVSAVAMYLVLSFVGRCYGG----------DGFVAGLTADPSIILSLLALSTTHQLGHYVTAALNGVELALPNLAPSMD-GLLTTNGPVFLTPPKNNKALFDVAFAGPALGFAVSWSTLIYGLVLTSKVVNSEEASALPHVAFDFLRLSSLTSATVETFLGTDTLLSIDPVAEVGLVAVHPLVVAGHLGVMASALALLPADSTSDGSRMIRGAFSRSSVVEFVSPFLSLFLIIQ 762          
BLAST of mRNA_Ecto-sp9_F_contig1041.402.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6Z5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.930e-14
Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = 0
Query:  263 QLLTQIGLLGLIMAGLLLSRDIARTAAAKLVGVELEAPVLLPSFETGLLATKRPVASFPSTSQDLFDIAIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTN-----LAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDG 428
            QL+T + LL L ++  L   + A    AK  G ++  P +LPS     L+ +  + + P     LFD A AGP VG A++ A L++GLQ+T       L   PS+P   L  SSL G++VDY L        +  QD  V  + +HPLA+GG AGM+  A  ++PL G+DG
Sbjct:  453 QLITPL-LLSLGVSQFL--HESAHLFVAKKDGFKMTPPTILPSVALPWLSFQNRLKTSPKNLSQLFDFASAGPAVGMASSIAFLLIGLQLTVNMDATQLQYAPSVPVGFLNFSSLGGNIVDYVLSGGSDGGIILKQDPNVS-IPLHPLAIGGFAGMMINALDLIPLAGTDG 619          
BLAST of mRNA_Ecto-sp9_F_contig1041.402.1 vs.
Match: Uncharacterized (protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SMU6_AUXPR)

HSP 1 Score: 68.9 bits (167), Expect = 1.260e-8
Identity = 67/210 (31.90%), Postives = 101/210 (48.10%), Query Frame = 0
Query:  226 GRTALALGAPITLFAFLGDVFNGSPYEVANGAVDGDVQLL----TQIGLLGLIMAGLLLSRDIARTAAAKLVGVELEAPVLLPSFETGLLATKRPVASFPSTSQDLFDIAIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSL---PSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDG 428
            G  +  L  P    AFL +  + S   +  G    D Q        +G L LI     ++ D   +  A+L G++L+AP+L+PS   G   + R +AS   +  DLFD+A AG   G ATA A ++ GLQ  A+ G  V+   P L   P++L   S L+ ++ +      L  + LA   + + PL V G AG++ TA   LP+   DG
Sbjct:  270 GLASSLLFLPKETLAFLANPSSISGDALPPGLEGFDPQAFLTAAVSVGALSLIPQ---VAHDAGHSLVARLRGIQLKAPLLVPSTALGTFGSIRQLASLVRSRTDLFDLAAAGLLGGGATALALMIAGLQ--ASHGGAVVEASPGLIPVPAALFHGSLLLSTLGNL----GLTQEALAQPTLYVSPLFVAGWAGIVNTALNALPVGCLDG 470          
BLAST of mRNA_Ecto-sp9_F_contig1041.402.1 vs.
Match: site-2 (protease family protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI00034DD64D)

HSP 1 Score: 62.4 bits (150), Expect = 1.320e-6
Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 0
Query:  294 GVELEAPVLLPSFETGLLATKRPVASFPSTSQDLFDIAIAGPTVGFATAAAALVMGLQMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERVAMHPLAVGGVAGMLWTAATVLPLPGSDGEAAIETL 435
            GV L    L+P+   G L +   + S   + Q LFDIAIAGP +GF  +    ++GL ++   G D+      LPSS+L+ S L+G++    L + L       E V +HPL + G  G++  A ++LP    DG   ++ +
Sbjct:  293 GVRLSPAFLVPTLGLGTLGSLNRIESPVPSRQGLFDIAIAGPALGFVLSLLFAIVGLWLSGHPG-DIF-----LPSSILKYSILMGALSKAILGSQLQA-----EVVGLHPLVLVGWMGLVINALSLLPAGQLDGGRIVQAV 423          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1041.402.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized0.000e+095.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.630e-1529.11protein (Fragment) n=1 Tax=Thalassiosira oceanica ... [more]
Hypothetical2.930e-1437.43protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Uncharacterized1.260e-831.90protein n=3 Tax=Auxenochlorella protothecoides Tax... [more]
site-21.320e-632.39protease family protein n=1 Tax=Synechococcus sp. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..181
NoneNo IPR availablePANTHERPTHR31412FAMILY NOT NAMEDcoord: 184..516
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 476..495
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 448..475
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 520..550
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..447
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 496..519
NoneNo IPR availableTMHMMTMhelixcoord: 453..475
NoneNo IPR availableTMHMMTMhelixcoord: 530..549
NoneNo IPR availableTMHMMTMhelixcoord: 496..515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1041contigEcto-sp9_F_contig1041:2665..22005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1041.402.1mRNA_Ecto-sp9_F_contig1041.402.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1041 1716..25205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1041.402.1 ID=prot_Ecto-sp9_F_contig1041.402.1|Name=mRNA_Ecto-sp9_F_contig1041.402.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=551bp
MFTPKILEMAEKTSFGGLATAKGVRAGTAFSTVANVLRPDTVELANGGRG
RGEADNVIRQMQANAAEELLSGGMGFQKRRLEVPDEDVELFVEQVLAGLV
VVGETLTTSIGFRLIRCNYVKSSTEAAELSRTVKSRMAEMGLDAKVAAFL
TWDVIAAFDSMENMGKEIEDLESQAAMMGDDDEQLAKVFNTLGAGLSLMG
PQDEKMFVLIPAETKPNEDTQANEQGRTALALGAPITLFAFLGDVFNGSP
YEVANGAVDGDVQLLTQIGLLGLIMAGLLLSRDIARTAAAKLVGVELEAP
VLLPSFETGLLATKRPVASFPSTSQDLFDIAIAGPTVGFATAAAALVMGL
QMTAAAGPDVLAGFPSLPSSLLQCSSLVGSVVDYFLHTNLAVQDLAVERV
AMHPLAVGGVAGMLWTAATVLPLPGSDGEAAIETLDTNFKYNAIVTPLAY
LFAVSQIIGGGMFLLSVLLVNFIAYPESAPLMREDNVTPVRSPARLALGV
IVAAVSLAVLSPMTISSFLTGGPLSMDTGAGAESVAAGLGVGGIGFHGFL
*
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