prot_Ecto-sp9_F_contig1040.393.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1040.393.1
Unique Nameprot_Ecto-sp9_F_contig1040.393.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length948
Homology
BLAST of mRNA_Ecto-sp9_F_contig1040.393.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA2_9PHAE)

HSP 1 Score: 1200 bits (3105), Expect = 0.000e+0
Identity = 845/961 (87.93%), Postives = 873/961 (90.84%), Query Frame = 0
Query:    1 MDEERARQAKSLRKATEQRDALKAEATRLRERERQWEXXXXXXXXALSSAELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAEASXXXXXXXXXXXXXXXXXXXXAVA-AERDAVRTDPAGHHLHGSTHVGAGWTGSPGQEHHRRVRSGEDARRWNGSWGQPDGAVAGGAPGVGEFEPSPFFFRRRGGGRDRAWSPAEEAVREYHERGRLDGGGGGWVTQAVSSAHEDGERRPGRRRGGXSRGRGGRRGQAESEPECWSDGDVEIGSSDYLRGSGRRSWTGRRPWSRNDRHGGRGGDGRGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWESEEYGSSSGNEEYRPYRGDRRGGRRRPWNDSYRXXXXXXXXXXXXXXPAATAGAGETAARERVQAAELLLVEGRERMARDLEAERAKFREXXXXXXXXXXXXXXXXXXXXEELEMESMRRRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ--TRQRDQERNGVQTVQGVAAKAAGAQSGQDASLGGXXXXXXXXXXXXXXXXXXXXXXXGQEQVSMEADAAAEVAAVAAATAPEASSLAPPLPQGATRSSCSTGVSVEDMGTCREDGADNKRXXXXXXXXL-----TTDSGVLSPTTNHDSRT----VPSTKTDLETTPKSPTLSSAPRDTLNEAPGGQIQAEKPGAAQTRPDRTAASALGAKSGDAVAGSADAQQVDITQAGDERDDPRVGGDGPVEPQAIDEADIAKAQAHREVQEYREKIRQRXXXXXXXXXXX--DQKPRSESTRVGVATTAGDIPAVRATGGDAGEEDSPRASQRWQRSQSSGHHDGGDLGESVSDLSEPSTRSRGNLEVGGGQSSSDREDNEQDPPSAAVRNFSTRSGDGVRIAMGGVGTRSRDGNTAGSSASVADGAXXXXXXXXXGFFGESVVSDGSDSDWF 947
            M+EE+ARQAKSLRK TE+RDALKAEATRLRERERQWEXXXXXX  ALSSAELDRDRAEHRAEEEECERSALDGQV+ELRAALRRSRDAIEAIRLCDVEAEA XXXXXXXXXXXXXXXXXXXX    AERDAVRTDPAGH+L  +TH G  WT SPGQEHHRRVR GED RR + SWGQPDGAVAGGA GVGEFEP P FFRRRGGG DRAWSPAE AVREYHE GRLDGGGG WVTQAVSSAHEDGERRP  +RGG SRGRGGR+GQAESEPECWSDGDVEIGSSDY  GSGRRS  GRRPWSRNDRHGGRGGDGRGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWESEE+GSSSGNEE+RPYRGDRRGGRRRPWNDSYRXXXXXXXXXXXXXX    AGA ETAARERVQAAELLLVE RERMARD EAERA FRE  XXXXXXXXXXXXXXXXX EELEMESMRRRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++  T QRDQE   VQT QGVAAKAAGAQSGQD S+GGXXXXXXXXXXXXXXXXXXXXX  G+E+V MEADAAAEVAA+ AATAPEASSLAPPLPQGATRSSC+TGVSVED+GTCRE GADNKRXXXXXXXX      TT SGVLSPTTNHDSRT    VPS+KTDLETTPKSPTLS+APRDT N+ PGG  Q EKPGA QTRPD+TAASALGAKSGDAVAGSADAQQVDITQ GD RD+PR GGD PVEPQAIDEADIAKAQAHREVQEYREKIRQRXXXXXXXXXXX  D KPR+ESTRVG+ATTAGD  AVRATGGDAGEEDSPRASQRWQRSQSSGHHDGGDLG S SDLSEPSTRSRGNLEVGGGQSSSDREDNEQDPPSAAV+N STRSGDGVRIAMGGVGTRSRDGNTAGSSASVADGAXXXXXXXX  FFGESVVSDGSD+DWF
Sbjct:    1 MEEEKARQAKSLRKVTEERDALKAEATRLRERERQWEXXXXXXRQALSSAELDRDRAEHRAEEEECERSALDGQVQELRAALRRSRDAIEAIRLCDVEAEAXXXXXXXXXXXXXXXXXXXXXXXXXAERDAVRTDPAGHYLRDTTHFG--WTRSPGQEHHRRVRGGEDGRRRDESWGQPDGAVAGGARGVGEFEPVPVFFRRRGGGGDRAWSPAEGAVREYHEGGRLDGGGGEWVTQAVSSAHEDGERRPDLQRGGGSRGRGGRKGQAESEPECWSDGDVEIGSSDYPSGSGRRSRNGRRPWSRNDRHGGRGGDGRGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWESEEHGSSSGNEEHRPYRGDRRGGRRRPWNDSYRXXXXXXXXXXXXXXXXXXAGASETAARERVQAAELLLVEERERMARDFEAERANFREREXXXXXXXXXXXXXXXXXREELEMESMRRRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRQATGQRDQEHR-VQTAQGVAAKAAGAQSGQDVSVGGXXXXXXXXXXXXXXXXXXXXXLGGRERVLMEADAAAEVAAITAATAPEASSLAPPLPQGATRSSCATGVSVEDVGTCREAGADNKRXXXXXXXXXXXXXPTTGSGVLSPTTNHDSRTPHGAVPSSKTDLETTPKSPTLSNAPRDTPNKPPGGLTQTEKPGATQTRPDQTAASALGAKSGDAVAGSADAQQVDITQTGDGRDEPRAGGDRPVEPQAIDEADIAKAQAHREVQEYREKIRQRXXXXXXXXXXXXXDHKPRAESTRVGLATTAGDTLAVRATGGDAGEEDSPRASQRWQRSQSSGHHDGGDLGGSASDLSEPSTRSRGNLEVGGGQSSSDREDNEQDPPSAAVKNLSTRSGDGVRIAMGGVGTRSRDGNTAGSSASVADGAXXXXXXXXGVFFGESVVSDGSDNDWF 958          
BLAST of mRNA_Ecto-sp9_F_contig1040.393.1 vs.
Match: LisH (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 1058 bits (2735), Expect = 0.000e+0
Identity = 724/898 (80.62%), Postives = 733/898 (81.63%), Query Frame = 0
Query:    1 MDEERARQAKSLRKATEQRDALKAEATRLRERERQWEXXXXXXXXALSSAELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAEASXXXXXXXXXXXXXXXXXXXXAVAAERDAVRTDPAGHHLHGSTHVGAGWTGSPGQEHHRRVRSGEDARRWNGSWGQPDGAVAGGAPGVGEFEPSPFFFRRRGGGRDRAWSPAEEAVREYHERGRLDGGGGGWVTQAVSSAHEDGERRPGRRRGGXSRGRGGRRGQAESEPECWSDGDVEIGSSDYLRGSGRRSWTGRRPWSRNDRHGGRGGDGRGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWESEEYGSSSGNEEYRPYRGDRRGGRRRPWNDSYRXXXXXXXXXXXXXXPAATAGAGETAARERVQAAELLLVEGRERMARDLEAERAKFREXXXXXXXXXXXXXXXXXXXXEELEMESMRRRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTRQRDQERNGVQTVQGVAAKAAGAQSGQDASLGGXXXXXXXXXXXXXXXXXXXXXXXGQEQVSMEADAAAEVAAVAAATAPEASSLAPPLPQGATRSSCSTGVSVEDMGTCREDGADNKRXXXXXXXXLTTDSGVLSPTTNHDSRTVPSTKTDLETTPKSPTLSSAPRDTLNEAPGGQIQAEKPGAAQTRPDRTAASALGAKSGDAVAGSADAQQVDITQAGDERDDPRVGGDGPVEPQAIDEADIAKAQAHREVQEYREKIRQRXXXXXXXXXXXDQKPRSESTRVGVATTAGDIPAVRATGGDAGEEDSPRASQRWQRSQSSGHHDGGDLGESVSDLSEPSTRSRGNLEVGGGQSSSDREDNEQDPPSAA----------VRNFST 888
            M+EERARQAKSLRKATE+RDALKAEATRLRERERQWE XXXXXX ALSSAELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAEA XXXXXXXXXXXXXXXXXXXX   AERDAVRTDP G  LHGSTH GAGWTGSPGQEHHRRVR GED RRWNGSWGQPDGA+AGGAPGVGEFEP+PFFFRRRGGG DR WSPAEEAVREYHERGRLDGGGG WVT A+SSAHED E+ PGRRRGG SRGRGGRRGQAESEPECWSDGDVEIGSSDY  GSGRRS TGRRPWSRNDRHGGRGGD RGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWESEEYGSSSGNEEYRPYRGDRRGGRRRPWNDSYR     XXXXXXXXX AATAGA ETAARERVQAAELLLVE RERMAR LEAERAKF E     XXXXXXXXXXXX   EELEMESMRRRLEXXXXXXXXXXXXXXXX               XXXXXRQTRQRDQERNGVQT QGVAAKAAGAQSGQD SLGG     XXXXXXXXXXXXXXXXXX  EQVSMEADAA           PEASSLAPPLPQ ATRSSCSTGVSVED                                                                       IQAEKPGA QTRPD TAASALGAKSGDAVAGS DAQQVDITQAGDERDDPRVGGDGPVEPQAIDEADIAKAQAHREVQEYREKIRQRXXXXXXXXX  DQKPRSESTRVGV TTAGDIPAVRATGGDAG+EDSPRASQRWQRSQSSGHHDGGDLG SVSDLSEPSTRSRGNLEVGGGQSSSDREDNEQDPPSAA          VR+F+T
Sbjct:  645 MEEERARQAKSLRKATEERDALKAEATRLRERERQWEAXXXXXXQALSSAELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAEAXXXXXXXXXXXXXXXXXXXXXXXXAERDAVRTDPTGQLLHGSTHFGAGWTGSPGQEHHRRVRGGEDGRRWNGSWGQPDGAMAGGAPGVGEFEPAPFFFRRRGGGGDRPWSPAEEAVREYHERGRLDGGGGEWVTPAMSSAHEDWEQCPGRRRGGGSRGRGGRRGQAESEPECWSDGDVEIGSSDYPSGSGRRSRTGRRPWSRNDRHGGRGGDDRGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWESEEYGSSSGNEEYRPYRGDRRGGRRRPWNDSYRRRRPSXXXXXXXXXXAATAGASETAARERVQAAELLLVEERERMARGLEAERAKFGEREAQRXXXXXXXXXXXXARREELEMESMRRRLEXXXXXXXXXXXXXXXXGSRADPEWRRVQDNEXXXXXRQTRQRDQERNGVQTAQGVAAKAAGAQSGQDVSLGGGQGRRXXXXXXXXXXXXXXXXXXXXEQVSMEADAAXXXXXXXXXXPPEASSLAPPLPQRATRSSCSTGVSVED-----------------------------------------------------------------------IQAEKPGATQTRPDLTAASALGAKSGDAVAGSVDAQQVDITQAGDERDDPRVGGDGPVEPQAIDEADIAKAQAHREVQEYREKIRQRXXXXXXXXX--DQKPRSESTRVGVGTTAGDIPAVRATGGDAGKEDSPRASQRWQRSQSSGHHDGGDLGGSVSDLSEPSTRSRGNLEVGGGQSSSDREDNEQDPPSAAESVGNAATSGVRHFAT 1469          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1040.393.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized0.000e+087.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LisH0.000e+080.62domain-containing protein n=1 Tax=Ectocarpus silic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..81
NoneNo IPR availableCOILSCoilCoilcoord: 420..488
NoneNo IPR availableCOILSCoilCoilcoord: 751..789
NoneNo IPR availablePANTHERPTHR46307FAMILY NOT NAMEDcoord: 13..519

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1040contigEcto-sp9_F_contig1040:21075..26220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1040.393.1mRNA_Ecto-sp9_F_contig1040.393.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1040 20456..26846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1040.393.1 ID=prot_Ecto-sp9_F_contig1040.393.1|Name=mRNA_Ecto-sp9_F_contig1040.393.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=948bp
MDEERARQAKSLRKATEQRDALKAEATRLRERERQWEAEATELRQALSSA
ELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAE
ASSASAAAAATAAAAAAAASTAAVAAERDAVRTDPAGHHLHGSTHVGAGW
TGSPGQEHHRRVRSGEDARRWNGSWGQPDGAVAGGAPGVGEFEPSPFFFR
RRGGGRDRAWSPAEEAVREYHERGRLDGGGGGWVTQAVSSAHEDGERRPG
RRRGGGSRGRGGRRGQAESEPECWSDGDVEIGSSDYLRGSGRRSWTGRRP
WSRNDRHGGRGGDGRGRADLSVRSTPGRRWASFDDRRDPSRRGWSGRWES
EEYGSSSGNEEYRPYRGDRRGGRRRPWNDSYRRRRSSEERSGSSAAPAAT
AGAGETAARERVQAAELLLVEGRERMARDLEAERAKFREREAQREEERQR
EREADRARREELEMESMRRRLEEEEDKAAAASRAARRRGSRADTERRRVQ
DNEEEEEQRQTRQRDQERNGVQTVQGVAAKAAGAQSGQDASLGGGQGRRV
DGARGDDADGVRGGDLGGQEQVSMEADAAAEVAAVAAATAPEASSLAPPL
PQGATRSSCSTGVSVEDMGTCREDGADNKRQQQQQQQQLTTDSGVLSPTT
NHDSRTVPSTKTDLETTPKSPTLSSAPRDTLNEAPGGQIQAEKPGAAQTR
PDRTAASALGAKSGDAVAGSADAQQVDITQAGDERDDPRVGGDGPVEPQA
IDEADIAKAQAHREVQEYREKIRQRRQQQQQQQQQHDQKPRSESTRVGVA
TTAGDIPAVRATGGDAGEEDSPRASQRWQRSQSSGHHDGGDLGESVSDLS
EPSTRSRGNLEVGGGQSSSDREDNEQDPPSAAVRNFSTRSGDGVRIAMGG
VGTRSRDGNTAGSSASVADGAGGGSGSGSGGFFGESVVSDGSDSDWF*
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