prot_Ecto-sp9_F_contig10380.375.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10380.375.1
Unique Nameprot_Ecto-sp9_F_contig10380.375.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length586
Homology
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0P4_9PHAE)

HSP 1 Score: 790 bits (2039), Expect = 3.230e-282
Identity = 489/591 (82.74%), Postives = 505/591 (85.45%), Query Frame = 0
Query:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGTEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYAMEVDGDVGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQEAXXXXXXXXEKENDGGAVAVP----AANDGSGEVENLKEDLMDADGGGGPGDSFDDDEAVLADMEAEEMAARPVAAEASRGKNTVAEPGPAAVCTSPPSTLAVESEETAGALDEEQASPEPTIREDEAMEDAGSSASGANTAAAVVADDANDPAPASAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASFSSPAKCRAAAAAASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV 585
            MSESEEERRPRPIGVADGS EDSGMERTDAAGANNGTEPG DSTGVAAPEE TTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKC+YKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKL GRARTRSL+RELRDTERDRVLEAK+GREAVDDVH+QEAARLAAKESKTAAAEGDRAEEREDEE AGSRY MEVDGD GDEGKSDRQVAAEGSAAAMS+QVRQRIEANRRLALDRLR KK EA   XXXXX                AANDGS EVE+L+EDLMD DGGGGPGD FDDDEA LADME E+MAARPVAAEASR KNTVAEPGPA V TSP STLAVES+ETAGA+DEE A PEP+IREDEAMED GS ASGANTAAAVVADDA DPAP SAAADGVARGGARAAGAGCAG+VDEA A  A  AA GGEP  TAGEESGGELPPASEPG P PGVGGG++RDGANDEAASL T   XXXXXXXX              XXXXXXXX             ASFSSPAKCR+A AAASGLPLSPLG+LFAGTDVSAEGGLAV REPLGGLFSDENV
Sbjct:    1 MSESEEERRPRPIGVADGSGEDSGMERTDAAGANNGTEPGLDSTGVAAPEEVTTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCRYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLAGRARTRSLMRELRDTERDRVLEAKFGREAVDDVHSQEAARLAAKESKTAAAEGDRAEEREDEEFAGSRYTMEVDGDGGDEGKSDRQVAAEGSAAAMSEQVRQRIEANRRLALDRLRSKKHEASVAXXXXXXXXXXXXXXXXXXXXXAANDGSREVEDLEEDLMDVDGGGGPGDGFDDDEAALADMETEQMAARPVAAEASRRKNTVAEPGPAVVSTSPASTLAVESDETAGAVDEELAPPEPSIREDEAMEDTGSRASGANTAAAVVADDAKDPAPVSAAADGVARGGARAAGAGCAGNVDEAPATWAADAAGGGEPDATAGEESGGELPPASEPGTPGPGVGGGQDRDGANDEAASLRTMTAXXXXXXXXDGITGGAKVDDAVLXXXXXXXXAPEPVAAKGDEEGASFSSPAKCRSATAAASGLPLSPLGTLFAGTDVSAEGGLAVVREPLGGLFSDENV 591          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE8_ECTSI)

HSP 1 Score: 726 bits (1873), Expect = 4.910e-258
Identity = 464/586 (79.18%), Postives = 468/586 (79.86%), Query Frame = 0
Query:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGTEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYAMEVDGDVGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQEAXXXXXXXXEKENDGGAVAVPAANDGSGEVENLKEDLMDADGGGGPGDSFDDDEAVLADMEAEEMAARPVAAEASRGKNTVAEPGPAAVCTSPPSTLAVESEETAGALDEEQASPEPTIREDEAMEDAGSSASGANTAAAVVADDANDPAPASAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFSSPAKCRAAAAA-ASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV 585
            MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNG+EPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQ+YKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLA RTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDR EEREDEELAGSRYAMEVDGD GDEGKSDRQVAAEGSAA MSDQVRQRIEANRRLALDRLRLKKQE XXXXXXXX              NDGS EVE+ +EDLMD DGGGGPGDSFDDDEA LADMEAEEMAARPVAAEASRGKNTVAEPGPAAV TSPPSTLAVE                                                              GARAAGAGCAGSVDEASAKCAVAAAR GEPGTTAGEESGGELPPASEP APAPGVGGGRERDGANDEAASLGT                        XXXXXXXXXXXXXXXXXXXXASFSSPAKCR      ASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV
Sbjct:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLACRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRVEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAATMSDQVRQRIEANRRLALDRLRLKKQEXXXXXXXXXXXXXXXXXXXXXXXNDGSREVEDPEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEASRGKNTVAEPGPAAVVTSPPSTLAVER-------------------------------------------------------------GARAAGAGCAGSVDEASAKCAVAAARSGEPGTTAGEESGGELPPASEPSAPAPGVGGGRERDGANDEAASLGTTAAASAAGADGITGGAKLDDAVLGXXXXXXXXXXXXXXXXXXXXASFSSPAKCRXXXXXXASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV 525          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM34_9STRA)

HSP 1 Score: 110 bits (276), Expect = 8.830e-22
Identity = 59/113 (52.21%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   50 EEATTAKK-VSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVD 161
            EE   AKK    R P FSE  LV+ KGL ++  DFP++ +   +G+E EFL  LM  YKEWGYQLYP +AFEDLA R E LGG+ R R  L  +RD ERDR + A++G++AV+
Sbjct:   52 EEGKPAKKPAKRRAPPFSEVQLVEGKGLMKIRDDFPKRLKPCVKGKEREFLSRLMFLYKEWGYQLYPSLAFEDLAVRIETLGGKERVRGHLAMMRDEERDRCVRARHGKDAVE 164          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E7Y0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.420e-13
Identity = 43/94 (45.74%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   57 KVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYK-GRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            KV+ +   FSE HL+  +GL  VY  FP         G E E LR L+ AYKEW Y+LYPG+ FEDL  +TE L  +A   S + +LR  ER R
Sbjct:   48 KVTKKRATFSEQHLLGPRGLSLVYSTFPTHFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHD7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.160e-12
Identity = 43/94 (45.74%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   57 KVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYK-GRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            KV+ +   FSE HL+  +GL  VY  FP         G E E LR L+ AYKEW Y+LYPG+ FEDL  +TE L  +A   S + +LR  ER R
Sbjct:   48 KVTKKRATFSEQHLLGPRGLSLVYSTFPTHFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR31_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.640e-12
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0
Query:   15 VADGSDEDSGMERTDAAGANNGTEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTER 147
             A G + D  + R D  GA+  T  G   T     + A +A     R     E+HLV  +G  +V++ FP +      GREA+ L  L+  YK+W + LYPG+ FED   RTE LG   + + L+ ELR+ ER
Sbjct:    2 AARGWERDGDLARRDDTGASTTTADGISGTHDGEGDAAGSAVVQKRRRNLLRESHLVSAEGFKKVHRTFPYQVSGDVSGREAQALASLINMYKQWAFDLYPGLNFEDFIDRTEMLGKGHQVQGLMTELREEER 134          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX14_9ARCH)

HSP 1 Score: 75.9 bits (185), Expect = 1.990e-12
Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   56 KKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            KK  N  P F E  LV   GL ++Y +FP + +Y+ + +E +FLR L+  YKEW +QL+PG++FED   +   L  ++R RS + ELRD ER R
Sbjct:   59 KKAKNAKP-FDEALLVGPHGLSRIYHEFPLRIRYQ-KNQEVQFLRQLLSLYKEWAFQLHPGLSFEDAILKISTLSHKSRVRSAVTELRDLERIR 150          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUG3_HYAAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.270e-12
Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 0
Query:   52 ATTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVD 161
            A++      R     E+HL+  +G  +VY+ FP +      GREA  L  L+  YK+W Y LYPG+ FED   RTE L    + + L+ E+R+ ER + +E + G++  D
Sbjct:   39 ASSTPSKKRRRNLLRESHLLSAEGFKKVYRTFPYQVSSTVSGREAPALASLIKMYKQWAYDLYPGLNFEDFVDRTETLAKGHQVQGLMAEMREKERRKRVERRCGKDEED 148          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Swi3 (domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3STA2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.280e-12
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   58 VSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLE 152
            V  R     E+HLV  +GL +V++ FP +      GREA+ L  L+  YK+W + LYPG+ FED   R E LG   + + L+ +LR+ E+ + LE
Sbjct:    7 VQRRRNLLRESHLVSAEGLKKVHRTFPYQVSADVSGREAQALASLIKMYKQWAFDLYPGLNFEDFVERAEALGKSHQVQGLVADLREKEKLKALE 101          
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Match: Timeless-interacting (protein isoform x3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB5_PLAHL)

HSP 1 Score: 73.6 bits (179), Expect = 1.120e-11
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   45 GVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVL 151
            GV AP    T K+  N      E+HL+  +G  +V++ FP +      GREA+ L  L+  YK+W + LYPG+ FED   RTE LG   + ++L+ ELR+ ER + L
Sbjct:   38 GVTAP--VGTQKRQRN---LLRESHLISAEGFQKVHRTFPYQVSADVSGREAQALASLVKMYKQWAFDLYPGLNFEDFVERTETLGKGRQVQALMMELREKERLKYL 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10380.375.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Swi33.230e-28282.74domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Swi34.910e-25879.18domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Swi38.830e-2252.21domain-containing protein n=1 Tax=Tribonema minus ... [more]
Swi34.420e-1345.74domain-containing protein (Fragment) n=1 Tax=Aphan... [more]
Swi31.160e-1245.74domain-containing protein n=5 Tax=Aphanomyces asta... [more]
Swi31.640e-1236.09domain-containing protein n=1 Tax=Peronospora effu... [more]
Swi31.990e-1243.62domain-containing protein n=1 Tax=archaeon TaxID=1... [more]
Swi33.270e-1235.45domain-containing protein n=1 Tax=Hyaloperonospora... [more]
Swi36.280e-1238.95domain-containing protein n=1 Tax=Phytophthora fra... [more]
Timeless-interacting1.120e-1139.25protein isoform x3 n=1 Tax=Plasmopara halstedii Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012923Chromosome segregation in meiosis protein 3PFAMPF07962Swi3coord: 66..146
e-value: 2.3E-18
score: 66.0
IPR040038TIPIN/Csm3/Swi3PANTHERPTHR13220TIMELESS INTERACTING-RELATEDcoord: 26..265
NoneNo IPR availablePRODOMPD089639coord: 36..132
e-value: 3.0E-8
score: 144.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10380contigEcto-sp9_F_contig10380:1288..3563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10380.375.1mRNA_Ecto-sp9_F_contig10380.375.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10380 1288..3563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10380.375.1 ID=prot_Ecto-sp9_F_contig10380.375.1|Name=mRNA_Ecto-sp9_F_contig10380.375.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=586bp
MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGTEPGRDSTGVAAPE
EATTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCQYKGRGREAEFLR
GLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRV
LEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYA
MEVDGDVGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQ
EAAAAAALVAEKENDGGAVAVPAANDGSGEVENLKEDLMDADGGGGPGDS
FDDDEAVLADMEAEEMAARPVAAEASRGKNTVAEPGPAAVCTSPPSTLAV
ESEETAGALDEEQASPEPTIREDEAMEDAGSSASGANTAAAVVADDANDP
APASAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEE
SGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAAAAAGADGITG
GAKLDDAVLGGGDGGGGAPEPVAANGDEGGASFSSPAKCRAAAAAASGLP
LSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012923Csm3
IPR040038TIPIN/Csm3/Swi3