prot_Ecto-sp9_F_contig10358.352.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10358.352.1
Unique Nameprot_Ecto-sp9_F_contig10358.352.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length556
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10358.352.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 749 bits (1933), Expect = 1.370e-266
Identity = 455/563 (80.82%), Postives = 458/563 (81.35%), Query Frame = 0 
Query:    1 QAFWLILEATAGNEDSHGYVRLSSVACYALALHAGGHLLLHRYSIGRRKLSHHALEFLLDLVTDVVGFAWINVAEE-IAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQXXXXXXXXXXXXXDVRLAASLFLLAYALLCSALATRVIGXXXXXXXXXXXXXXX-------LTRSNSGGSTGSRSDLIIRAISSYGVTAAQASDAAAAASAEVAGEVEASSTPSCGGGLNTSYREGEGDGADVGPSNSTKVGDGGGERGAAPLAXXXXXXXXXXXXVDEAAGGEDARRGSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDADGGDLHDHNGAGEGGGGLLEPLVPTGDTAVL 555
            QAFWLILEATAGNEDS GYVRLSSVACYALALHAGGHLLLHRYS GRRKLSHHALEFLLDLVTDVVGFAWINVAEE +AQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQ             DVRLAASLFLLAYALLCSALATRVIG     XXXXXXXXXX       LTRSNSGGSTGSRSDL+IRAISSYGVTAAQASDAA        G+VEASSTPSCGGG NTSYREG GD ADVGPSNSTKVGDGGGERGAAPLAXXXXXXXXXXXX   AAGGEDARR SLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRR                                                             VGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDA GGDLHDHNGAGEGGGGLLEPLVPTGDTAVL
Sbjct:   37 QAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGRGGDGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXXXXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAXXXXXXXXGDVEASSTPSCGGGRNTSYREGGGDVADVGPSNSTKVGDGGGERGAAPLAXXXXXXXXXXXXXX-AAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGAGGAVNDSVGGALGSRPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVV------VGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGGLLEPLVPTGDTAVL 592
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10358.352.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.370e-26680.82protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 375..394
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 395..456
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 356..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..355
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 477..495
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 514..555
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 457..476
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 496..513
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 491..513
NoneNo IPR availableTMHMMTMhelixcoord: 18..40
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 457..476
NoneNo IPR availableTMHMMTMhelixcoord: 338..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10358contigEcto-sp9_F_contig10358:730..4344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10358.352.1mRNA_Ecto-sp9_F_contig10358.352.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10358 730..4344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10358.352.1 ID=prot_Ecto-sp9_F_contig10358.352.1|Name=mRNA_Ecto-sp9_F_contig10358.352.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=556bp
QAFWLILEATAGNEDSHGYVRLSSVACYALALHAGGHLLLHRYSIGRRKL
SHHALEFLLDLVTDVVGFAWINVAEEIAQVFEVRAKTTLVYAALAFAASL
GAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGF
FYRTAGGQGGRGGGGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTV
AASAVAVGGGGGLTRSNSGGSTGSRSDLIIRAISSYGVTAAQASDAAAAA
SAEVAGEVEASSTPSCGGGLNTSYREGEGDGADVGPSNSTKVGDGGGERG
AAPLAAAAAAAAAAEAEVDEAAGGEDARRGSLRRGLKAYMRLTVGMMVGW
AYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGS
NRRKNGGRTTAAAGGAVNDSVGGALGSRPGGGYFHVERPEEDEEETRRRD
AAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAK
LSLAVAATVVVLGREVRRAGRRDADGGDLHDHNGAGEGGGGLLEPLVPTG
DTAVL*
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