prot_Ecto-sp9_F_contig10351.348.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10351.348.1
Unique Nameprot_Ecto-sp9_F_contig10351.348.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length71
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10351.348.1 vs.
Match: WD-40 (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.320e-40
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0 
Query:    1 MLYGLTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARR 70
            MLYG TECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARR
Sbjct:  863 MLYGFTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARR 932
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BLAST of mRNA_Ecto-sp9_F_contig10351.348.1 vs.
Match: UDENN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.320e-40
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0 
Query:    1 MLYGLTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARR 70
            MLYG TECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARR
Sbjct:  901 MLYGFTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKARR 970
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BLAST of mRNA_Ecto-sp9_F_contig10351.348.1 vs.
Match: Ribosome (assembly protein 4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT74_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.580e-8
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    1 MLYGLTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKA 68
            +L G  +C+F++ P+ PIFN ARFL EY       F+S ++DT +F+  LE QD P +  F   L +A
Sbjct:  143 LLSGYHDCVFYIDPNSPIFNRARFLAEYAPAEDHAFLSRLLDTQSFQAFLENQDGPSINLFRRTLFQA 210
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10351.348.1 vs.
Match: UDENN (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBD8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.590e-8
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    1 MLYGLTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLLETQDTPPLRPFHDLLDKA 68
            +L G  +C+F++ P+ PIFN ARFL EY       F+S ++DT +F+  LE QD P +  F   L +A
Sbjct:  765 LLSGYHDCVFYIDPNSPIFNRARFLAEYAPAEDHAFLSRLLDTQSFQAFLENQDGPSINLFRRTLFQA 832
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10351.348.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
WD-402.320e-4098.57repeat protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
UDENN2.320e-4098.57domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Ribosome2.580e-841.18assembly protein 4 n=1 Tax=Nannochloropsis gaditan... [more]
UDENN2.590e-841.18domain-containing protein n=1 Tax=Nannochloropsis ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10351contigEcto-sp9_F_contig10351:196..823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10351.348.1mRNA_Ecto-sp9_F_contig10351.348.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10351 196..827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10351.348.1 ID=prot_Ecto-sp9_F_contig10351.348.1|Name=mRNA_Ecto-sp9_F_contig10351.348.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=71bp
MLYGLTECLFFLHPDRPIFNGARFLQEYCEESYVPFMSVVIDTLAFKYLL
ETQDTPPLRPFHDLLDKARR*
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