prot_Ecto-sp9_F_contig1035.347.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1035.347.1
Unique Nameprot_Ecto-sp9_F_contig1035.347.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length2069
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1035.347.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU71_ECTSI)

HSP 1 Score: 1531 bits (3963), Expect = 0.000e+0
Identity = 818/844 (96.92%), Postives = 823/844 (97.51%), Query Frame = 0 
Query:  394 DEAAADDIEERPGMMASFTDSVASEALDEFNYGNEATADDEVFQRQMRATAKACLRSLHAILKHKWVRLDPLLGGMKEDLLRMLVSCS-----ALSPSLVVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITVFDALKRLAYVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLKENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKYLGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQQGLDSRIVAVRLASLWSLLLLGIPGSGKNDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYDDTSSALVKVSALCCAVVTVHLPDMPAKAVLSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDPSRFTTVLRVLLEEATPVGGMHIEAVLKRVVVLSAVPGVPDLSPALLNLTDYVFQRRAGESSLAPTKLTFSAAPPKVGGRAASGRAASQSTNGSVSSTRGAGVRGSKAAMNSGTG 1232
            +EAAADDIEERP MMASFTDSVASE LDEFNYGNEATADDEVFQRQMRATAKACLRSLHAILKHKWVRLDPLL GMKEDLLRMLVSCS     ALSP LVVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRIT+FDALKRLA VDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWL ENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKY GYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQ GLDSRIVAVRLASLWSLLLLGIPGSG NDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYD+TSSALVKVSALCCAVVTVHLPDMPAKAV SVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDP RFTTVL+VLLEEAT VGGMHIEAVLKRVVVLSAVPGV DLSPALLNLTDYVFQRRAG SS APTKLTFSAAPPKVGGRAASGRAASQSTNGSVSSTRGAGVRGSKAAMNS +G
Sbjct:   20 EEAAADDIEERPDMMASFTDSVASEVLDEFNYGNEATADDEVFQRQMRATAKACLRSLHAILKHKWVRLDPLLEGMKEDLLRMLVSCSVAGTQALSPRLVVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITLFDALKRLACVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQ-GLDSRIVAVRLASLWSLLLLGIPGSGNNDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYDETSSALVKVSALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDP-RFTTVLKVLLEEATSVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRAGGSSRAPTKLTFSAAPPKVGGRAASGRAASQSTNGSVSSTRGAGVRGSKAAMNSVSG 861
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1035.347.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU72_ECTSI)

HSP 1 Score: 377 bits (967), Expect = 3.730e-109
Identity = 284/296 (95.95%), Postives = 287/296 (96.96%), Query Frame = 0 
Query:    5 RLVQLGFLRKTGQFFGQAAAQKDPKAQQLLAHSVWHLSATLTDVKPLESQPLPXXXXXXXXXPPTDSGSPAFTREAISALSMGGLQQHQQQYKGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVVSVSVSEANTVRSSRASVRLVERARGSMILRQNSMGGALSAARGGLVGGRKLVRXXXXXXXXXXXSLSETSSHQGGAGLEGGVPRALGSGLSLDTTSGAADSSPSEVAEKGPHVVACGVMHHLLRLAESGTTGFVRQGSHKQAQEG 300
            RLVQLGFLRKTGQFFGQAAAQKDPKAQQLLAHSVWHLSATLTDVKPLESQP PXXXXXXXXXPPTDSGSPAFT EAISALSMGGLQQHQQQYKGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVVSVSVSEANTVRSSRASVR V+RA+GSMILRQN  GGALSAARGGLVGGRKLVRXXXXXXXXXX SLSETSSH+GG GLEGGVP ALGSGLSLDTTSGAADSSPSEV EKGPHVVACGVMHHLLRLAESGTTGFVRQGSHKQAQEG
Sbjct:  429 RLVQLGFLRKTGQFFGQAAAQKDPKAQQLLAHSVWHLSATLTDVKPLESQPPPXXXXXXXXXPPTDSGSPAFTGEAISALSMGGLQQHQQQYKGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVVSVSVSEANTVRSSRASVRPVDRAKGSMILRQNFPGGALSAARGGLVGGRKLVRXXXXXXXXXXESLSETSSHRGGVGLEGGVPSALGSGLSLDTTSGAADSSPSEVDEKGPHVVACGVMHHLLRLAESGTTGFVRQGSHKQAQEG 724
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1035.347.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized0.000e+096.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.730e-10995.95protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 416..699
e-value: 7.9E-9
score: 36.6
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 523..916
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 328..1118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1035contigEcto-sp9_F_contig1035:2484..26914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1035.347.1mRNA_Ecto-sp9_F_contig1035.347.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1035 2484..26914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1035.347.1 ID=prot_Ecto-sp9_F_contig1035.347.1|Name=mRNA_Ecto-sp9_F_contig1035.347.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=2069bp
MLPPRLVQLGFLRKTGQFFGQAAAQKDPKAQQLLAHSVWHLSATLTDVKP
LESQPLPRPHPHAHRHPPTDSGSPAFTREAISALSMGGLQQHQQQYKGVR
RRSSSNSVLLPGQGESTTTTAKSSTATAATNNQGAARGVYGSRNRRRSSG
GSSVVSVSVSEANTVRSSRASVRLVERARGSMILRQNSMGGALSAARGGL
VGGRKLVRRRSSTLTEEEESLSETSSHQGGAGLEGGVPRALGSGLSLDTT
SGAADSSPSEVAEKGPHVVACGVMHHLLRLAESGTTGFVRQGSHKQAQEG
TCATGALCNLARKPWITTEICKETKMMQTLLTSIGVALAHGEEGTSTLAA
NGLWNLISRFSQDRQFVQECLTQGVVGSLCGAAKGAADLLSALDEAAADD
IEERPGMMASFTDSVASEALDEFNYGNEATADDEVFQRQMRATAKACLRS
LHAILKHKWVRLDPLLGGMKEDLLRMLVSCSALSPSLVVLRHVSGVLGNL
SRVIVASSSDEGGPPRWKSRITVFDALKRLAYVDDQRLAFRTSAILYGLT
RKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAAS
IASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQG
LWALVQLADANGSTVSMRLALLALFNLACDLRENARWLKENTVAAVLDFD
DEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDR
ALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKYLGYKQ
QGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEM
RKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQQGLDS
RIVAVRLASLWSLLLLGIPGSGKNDDTTTAAPASAGKDHAGGGTQVRMWM
LFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDK
VAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYDDTSSALVK
VSALCCAVVTVHLPDMPAKAVLSVCEGCLDVFLKVLPTEEHEVRDLCSLA
MRCLSGNEELLLDLLSDPSRFTTVLRVLLEEATPVGGMHIEAVLKRVVVL
SAVPGVPDLSPALLNLTDYVFQRRAGESSLAPTKLTFSAAPPKVGGRAAS
GRAASQSTNGSVSSTRGAGVRGSKAAMNSGTGGVDRQVTRTIPGGRQHQA
SLAASGSGGSVASIRAHRMSRLKATRTGGTITSNSQGPKTTAEGGMNNSV
KAPGGSEQDQVASAGPSAVDPANAAAGVGVAGSADSSGSAITIARNLNSK
FNVFQDIVAETPGTYHMSIAGLTHCDENNNNTEDENDDDYDTDQDEGARS
VPGAADAAGKVGALARIRPSVTKAVPGVSSRRPPSCSRVTAAQPPTKATS
VGKHESVTGWGLGPSTSCDANTGGDAEHGGTGGQGPRYEEQRSMLERLND
NDHDYLLSDSSQTSDDEEDLEITYNDDEIRQVKRLVFRVVEADMSTTVVE
SVIEVVTQLREVARRQCTSFQQKSEEFRKRVLSTRKGEALPLPHSNRTCS
NGPASASSRETSRESTPSTSCPPLPRTAERPTVTPLDTNTSSDNWDPAKQ
LLLLMGMQPLPMASGWEFDSSQSLKGRGAPKKVNLCTTKFVEECKTLTPT
TVAVPIPLPEELVHFAQKGDAEMPSGLERCILPPLERPAANVTALEPSEL
DESSVRTAVAAAAAAAAAAATPSEHPGLEELNGDVHGAVAAASDEVTPSS
FNNAASRLVRRLSGEAVTRTGRGNSKHTRHTKQIDNKNNRRRSVKGGREP
VVEVEGSGAAPRARNFSAGDRGSGAAGAAPNTLEGGGGTASSMTEEQRRS
LFYAGGVQRTGDKGRGETTVGSWNNIAEASGVSPTRSLEEMFVESPLLAA
LSVVETCRAETTGLAADIGSAGGGGGRCGKRSSNRSAVPALAAEMVSMRT
QRSAEQRAADRERQRLLRSLGVGTRRTLRAGPGKWRGLRVVINAVGPRAR
SPASPPFSLATVASPVQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold