prot_Ecto-sp9_F_contig1033.333.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig1033.333.1
Unique Name	prot_Ecto-sp9_F_contig1033.333.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	222

Homology

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BLAST of mRNA_Ecto-sp9_F_contig1033.333.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT81_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 2.850e-129
Identity = 217/222 (97.75%), Postives = 220/222 (99.10%), Query Frame = 0

Query:    1 MEAQKGGFGRQVALKEREIVILTEEQRELKRDLQNFKADYFSADAEDVIRALRKRQRGLNEQVRYLERQLELAQQSSHVEGGAIEVLEGLLRQRDTDKQLVHGLGLKSLEIGLKIGLLETDAGGKTVEVSRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAELGRSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLETTTTAVGDRRGLGG 222
            MEAQKGGFGRQVALKEREIVILTEEQRELKRDL+NFKADY+SADAEDVIRALRKRQRGLN+QVRYLERQLELAQQSSHVEGGAIEVLEGLLRQRDTDKQLVHGLGLKSLEIGLKIGLLETDAG KTVEVSRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAEL RSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLETTTTAVGDRRGLGG
Sbjct: 1032 MEAQKGGFGRQVALKEREIVILTEEQRELKRDLRNFKADYYSADAEDVIRALRKRQRGLNDQVRYLERQLELAQQSSHVEGGAIEVLEGLLRQRDTDKQLVHGLGLKSLEIGLKIGLLETDAGSKTVEVSRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLETTTTAVGDRRGLGG 1253

[Close]

BLAST of mRNA_Ecto-sp9_F_contig1033.333.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ1_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.020e-125
Identity = 213/244 (87.30%), Postives = 217/244 (88.93%), Query Frame = 0

Query:    1 MEAQKGGFGRQVALKEREIVILTEEQRELKRDLQNFKADYFSADAEDVIRALRKRQRGLNEQVRYLERQLELAQQSSHVEGGAIEVLEGLLRQRDTDKQLVHGLGLKSLEIGLKIGLLETDAGGKTVEV----------------------SRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAELGRSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLETTTTAVGDRRGLGG 222
            MEAQKGGF RQVALKEREIVILTEEQR+LKRDL+N KADY+SAD EDVIRALRKRQRGLNEQVRYLERQLELAQQSSHVEGGAIEVLEGLL QRDTDKQLVHGLGLKSLEIGLKIGLLETDAGGKTVEV                      SRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAEL RSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARL+TTTTAVGDRRGLGG
Sbjct:  427 MEAQKGGFDRQVALKEREIVILTEEQRDLKRDLRNVKADYYSADTEDVIRALRKRQRGLNEQVRYLERQLELAQQSSHVEGGAIEVLEGLLHQRDTDKQLVHGLGLKSLEIGLKIGLLETDAGGKTVEVGGPFERRQWRHAETIRFSRRFVSRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLDTTTTAVGDRRGLGG 670

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1033.333.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1033.333.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	2.850e-129	97.75	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.020e-125	87.30	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..76
None	No IPR available	COILS	Coil	Coil	coord: 12..39

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1033	contig	Ecto-sp9_F_contig1033:9286..12458 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1033.333.1	mRNA_Ecto-sp9_F_contig1033.333.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig1033 9286..12458 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig1033.333.1 ID=prot_Ecto-sp9_F_contig1033.333.1|Name=mRNA_Ecto-sp9_F_contig1033.333.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=222bp
MEAQKGGFGRQVALKEREIVILTEEQRELKRDLQNFKADYFSADAEDVIR
ALRKRQRGLNEQVRYLERQLELAQQSSHVEGGAIEVLEGLLRQRDTDKQL
VHGLGLKSLEIGLKIGLLETDAGGKTVEVSRMGQKEQQAVAHLKGRLVKE
RGIVDARRKTVEAELGRSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWG
RLTAARLETTTTAVGDRRGLGG